Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 0.0e+00 1140.9 569 100.0
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 2.9e-193 679.1 568 61.8
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 7.3e-192 674.5 569 62.4
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 2.6e-181 639.4 562 59.4
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.7e-178 629.4 572 58.0
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 8.9e-174 614.4 569 57.8
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 3.4e-173 612.5 552 57.8
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.3e-172 610.5 569 57.6
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 3.7e-172 609.0 572 57.7
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 3.6e-167 592.4 569 55.5
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 8.1e-167 591.3 569 56.4
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 3.1e-166 589.3 565 55.4
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 3.4e-165 585.9 546 56.4
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.7e-164 583.6 569 54.0
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 6.4e-164 581.6 547 55.6
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 4.1e-163 578.9 546 54.9
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 6.0e-162 575.1 566 55.1
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.0e-161 574.3 567 55.4
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 1.2e-159 567.4 544 54.8
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 2.8e-159 566.2 570 54.0
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 8.1e-159 564.7 565 53.3
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.1e-158 564.3 534 56.4
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.1e-158 564.3 543 54.0
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.8e-158 563.5 567 55.6
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 1.2e-157 560.8 569 52.0
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 1.2e-157 560.8 569 52.0
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 3.8e-156 555.8 550 52.4
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 3.8e-156 555.8 571 54.1
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 6.4e-156 555.1 546 54.4
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 8.4e-156 554.7 569 51.7
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.6e-151 540.4 570 52.8
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 3.6e-151 539.3 517 55.1
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 1.1e-150 537.7 579 49.6
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 2.4e-150 536.6 568 52.8
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 4.6e-146 522.3 568 50.0
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 4.6e-146 522.3 570 52.8
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.2e-140 503.4 574 51.4
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 3.8e-140 502.7 572 51.4
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 8.4e-140 501.5 574 51.2
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.3e-137 493.4 572 50.7
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 2.3e-137 493.4 574 47.7
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 1.1e-136 491.1 548 48.2
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.3e-136 489.6 467 57.2
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 5.6e-136 488.8 499 54.5
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 1.6e-130 470.7 558 47.8
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 2.7e-130 469.9 573 45.9
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 4.6e-130 469.2 561 46.0
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 7.9e-130 468.4 574 48.4
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 1.3e-129 467.6 551 46.5
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.8e-129 467.2 560 46.8
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 5.1e-129 465.7 574 45.8
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 2.5e-128 463.4 539 48.4
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 4.3e-128 462.6 552 45.8
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 2.8e-127 459.9 549 46.4
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 4.8e-127 459.1 537 47.9
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 5.3e-126 455.7 518 47.9
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 3.2e-123 446.4 539 46.6
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 7.2e-123 445.3 552 47.1
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 1.6e-122 444.1 505 47.1
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 2.5e-120 436.8 571 44.3
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 3.3e-120 436.4 467 49.0
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 4.3e-120 436.0 550 45.6
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 7.4e-120 435.3 550 45.5
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 2.8e-119 433.3 516 46.9
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 8.2e-119 431.8 569 42.9
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 3.1e-118 429.9 516 46.5
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 4.1e-118 429.5 538 45.5
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 9.1e-118 428.3 550 43.3
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 3.8e-116 422.9 541 44.2
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 1.2e-114 417.9 552 45.3
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 9.7e-112 408.3 543 43.5
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 1.7e-111 407.5 565 41.8
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 1.4e-110 404.4 570 41.8
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 1.8e-110 404.1 546 44.5
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 2.9e-108 396.7 575 42.3
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 8.8e-105 385.2 576 40.6
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 1.7e-103 380.9 429 46.2
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 1.9e-99 367.5 469 43.1
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 4.7e-98 362.8 563 40.9
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 2.0e-93 347.4 547 41.0
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 8.5e-92 342.0 551 38.1
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 1.5e-91 341.3 580 38.6
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 8.8e-89 332.0 560 39.5
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 4.4e-88 329.7 554 39.7
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 2.2e-87 327.4 554 36.6
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.8e-86 324.3 555 39.3
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.0e-84 318.5 513 38.2
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 5.5e-83 312.8 526 38.8
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 4.7e-82 309.7 482 38.6
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 2.2e-79 300.8 559 35.8
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 4.5e-77 293.1 512 37.1
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 5.0e-76 289.7 512 36.7
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 5.0e-76 289.7 478 37.2
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 6.8e-73 279.3 307 47.2
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 9.8e-72 275.4 537 36.1
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 1.2e-50 205.3 342 37.1
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 1.7e-47 194.9 342 36.8
unitig_736.g22373 Utricularia gibba HOM05D006144 ORTHO05D006357 1.9e-27 128.3 212 34.9
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 2.1e-26 124.8 356 27.8
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 5.3e-25 120.2 329 28.6
unitig_736.g22374 Utricularia gibba HOM05D006144 ORTHO05D006357 1.7e-23 115.2 210 36.2
GSVIVG01002722001 Vitis vinifera HOM05D006144 ORTHO05D006357 2.1e-21 108.2 105 49.5
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 6.0e-21 106.7 142 39.4
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 2.3e-20 104.8 337 28.2
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 1.4e-17 95.5 236 31.8
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 4.0e-17 94.0 247 31.2
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 4.6e-13 80.5 252 28.2
Sabra05G0109200 Salix brachista HOM05D006144 ORTHO05D006357 1.5e-11 75.5 194 35.1
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 4.3e-11 73.9 135 40.7
TPR.G19009 Trifolium pratense HOM05D006144 ORTHO05D006357 1.7e-07 62.0 117 35.9


User provided reference genes

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