Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0547 Trochodendron aralioides HOM05D007246 ORTHO05D009066 2.3e-129 465.7 258 100.0
Manes.18G076600 Manihot esculenta HOM05D007246 ORTHO05D009066 9.4e-30 134.8 101 67.3
Nn5g28257 Nelumbo nucifera HOM05D007246 ORTHO05D009066 2.7e-29 133.3 97 67.0
GSVIVG01008877001 Vitis vinifera HOM05D007246 ORTHO05D009066 4.7e-29 132.5 101 63.4
Potri.002G084400 Populus trichocarpa HOM05D007246 ORTHO05D009066 5.1e-28 129.0 102 62.7
Actinidia02617 Actinidia chinensis HOM05D007246 ORTHO05D009066 8.8e-28 128.3 96 65.6
Gorai.010G050000 Gossypium raimondii HOM05D007246 ORTHO05D009066 8.8e-28 128.3 102 65.7
CiPaw.05G222500 Carya illinoinensis HOM05D007246 ORTHO05D009066 3.3e-27 126.3 104 63.5
Rhsim03G0059000 Rhododendron simsii HOM05D007246 ORTHO05D009066 3.3e-27 126.3 97 64.9
Gohir.A06G044000 Gossypium hirsutum HOM05D007246 ORTHO05D009066 4.4e-27 125.9 102 63.7
CSS0048322 Camellia sinensis var. sinensis HOM05D007246 ORTHO05D009066 5.7e-27 125.6 98 65.3
Gohir.D06G044900 Gossypium hirsutum HOM05D007246 ORTHO05D009066 2.2e-26 123.6 103 65.0
Prupe.1G499600 Prunus persica HOM05D007246 ORTHO05D009066 3.7e-26 122.9 104 61.5
Eucgr.F03786 Eucalyptus grandis HOM05D007246 ORTHO05D009066 4.8e-26 122.5 100 62.0
QL09p034990 Quercus lobata HOM05D007246 ORTHO05D009066 4.8e-26 122.5 102 60.8
TWI36G0927 Tripterygium wilfordii HOM05D007246 ORTHO05D009066 6.3e-26 122.1 95 64.2
Aqoxy6G00205 Aquilegia oxysepala HOM05D007246 ORTHO05D009066 8.2e-26 121.7 100 62.0
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla HOM05D007246 ORTHO05D009066 1.1e-25 121.3 100 61.0
MD08G1164500 Malus domestica HOM05D007246 ORTHO05D009066 1.1e-25 121.3 102 61.8
RcHm_v2.0_Chr6g0295671 Rosa chinensis HOM05D007246 ORTHO05D009066 1.1e-25 121.3 96 64.6
Duzib093G0837 Durio zibethinus HOM05D007246 ORTHO05D009066 4.1e-25 119.4 96 64.6
PSO170G1503 Papaver somniferum HOM05D007246 ORTHO05D009066 5.3e-25 119.0 105 58.1
Cfa016011 Carpinus fangiana HOM05D007246 ORTHO05D009066 7.0e-25 118.6 95 62.1
Cpa.g.sc36.60 Carica papaya HOM05D007246 ORTHO05D009066 9.1e-25 118.2 107 59.8
Haze_00452 Corylus avellana HOM05D007246 ORTHO05D009066 1.2e-24 117.9 103 58.3
PSO528G0221 Papaver somniferum HOM05D007246 ORTHO05D009066 1.2e-24 117.9 105 58.1
PGR142G2996 Punica granatum HOM05D007246 ORTHO05D009066 1.2e-24 117.9 103 59.2
Nitab4.5_0001803g0080 Nicotiana tabacum HOM05D007246 ORTHO05D009066 2.0e-24 117.1 102 56.9
CANSAT25G3837 Cannabis sativa HOM05D007246 ORTHO05D009066 3.5e-24 116.3 99 57.6
Thecc.08G124300 Theobroma cacao HOM05D007246 ORTHO05D009066 4.5e-24 115.9 96 63.5
ClCG11G015710 Citrullus lanatus HOM05D007246 ORTHO05D009066 5.9e-24 115.5 104 56.7
Lj5g0017876 Lotus japonicus HOM05D007246 ORTHO05D009066 1.0e-23 114.8 101 56.4
Sed0023701 Sechium edule HOM05D007246 ORTHO05D009066 2.2e-23 113.6 100 57.0
Lalb_Chr06g0169561 Lupinus albus HOM05D007246 ORTHO05D009066 2.9e-23 113.2 98 56.1
COL.COLO4_35932 Corchorus olitorius HOM05D007246 ORTHO05D009066 5.0e-23 112.5 103 57.3
Glyma.20G199500 Glycine max HOM05D007246 ORTHO05D009066 1.9e-22 110.5 95 57.9
Lsat_1_v5_gn_5_179321 Lactuca sativa HOM05D007246 ORTHO05D009066 1.9e-22 110.5 117 52.1
Phvul.L001676 Phaseolus vulgaris HOM05D007246 ORTHO05D009066 1.9e-22 110.5 95 58.9
Psat6g131200 Pisum sativum HOM05D007246 ORTHO05D009066 1.9e-22 110.5 98 55.1
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea HOM05D007246 ORTHO05D009066 5.5e-22 109.0 102 55.9
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea HOM05D007246 ORTHO05D009066 5.5e-22 109.0 102 55.9
Atru.chr10.1388 Acer truncatum HOM05D007246 ORTHO05D009066 7.2e-22 108.6 101 57.4
CsaV3_4G028300 Cucumis sativus L. HOM05D007246 ORTHO05D009066 7.2e-22 108.6 100 56.0
EL10Ac1g01002 Beta vulgaris HOM05D007246 ORTHO05D009066 9.4e-22 108.2 94 60.6
FAN15G0425 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.2e-21 107.8 95 56.8
TPR.G18552 Trifolium pratense HOM05D007246 ORTHO05D009066 1.2e-21 107.8 95 56.8
Ciclev10002868m.g Citrus clementina HOM05D007246 ORTHO05D009066 1.6e-21 107.5 102 54.9
PGSC0003DMG400000898 Solanum tuberosum HOM05D007246 ORTHO05D009066 2.7e-21 106.7 99 56.6
FvH4_2g26810 Fragaria vesca HOM05D007246 ORTHO05D009066 3.6e-21 106.3 95 55.8
DCAR_003548 Daucus carota HOM05D007246 ORTHO05D009066 6.1e-21 105.5 95 52.6
Nitab4.5_0001273g0060 Nicotiana tabacum HOM05D007246 ORTHO05D009066 6.1e-21 105.5 96 56.2
Sopen11g007630 Solanum pennellii HOM05D007246 ORTHO05D009066 6.1e-21 105.5 99 55.6
MELO3C010475.2 Cucumis melo HOM05D007246 ORTHO05D009066 8.0e-21 105.1 85 63.5
FAN27G1944 Fragaria x ananassa HOM05D007246 ORTHO05D009066 1.4e-20 104.4 81 64.2
HanXRQChr13g0407621 Helianthus annuus HOM05D007246 ORTHO05D009066 1.4e-20 104.4 94 53.2
Peaxi162Scf00537g00034 Petunia axillaris HOM05D007246 ORTHO05D009066 1.4e-20 104.4 96 56.2
Solyc11g012890.2 Solanum lycopersicum HOM05D007246 ORTHO05D009066 1.4e-20 104.4 99 55.6
Medtr1g073190 Medicago truncatula HOM05D007246 ORTHO05D009066 4.0e-20 102.8 100 56.0
VMungo0720G2760 Vigna mungo HOM05D003112 ORTHO05D003660 4.0e-20 102.8 95 53.7
Ca_09797_v3 Cicer arietinum L. HOM05D007246 ORTHO05D009066 5.2e-20 102.4 98 52.0
MBI01_g01254_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 5.2e-20 102.4 92 60.9
MBI01_g01252_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.7e-20 102.1 92 60.9
MBI01_g01253_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 6.7e-20 102.1 109 54.1
Hund17288 Selenicereus undatus HOM05D007246 ORTHO05D009066 6.7e-20 102.1 100 57.0
MBI01_g01255_MAGBIO Magnolia biondii HOM05D007246 ORTHO05D009066 1.5e-19 100.9 109 52.3
Sp1g35150 Schrenkiella parvula HOM05D007246 ORTHO05D009066 2.0e-19 100.5 101 56.4
Sc25g0000500 Simmondsia chinensis HOM05D007246 ORTHO05D009066 2.6e-19 100.1 95 55.8
Ah.05g171160 Amaranthus hybridus HOM05D007246 ORTHO05D009066 1.3e-18 97.8 89 59.6
BcaC06g31695 Brassica carinata HOM05D007246 ORTHO05D009066 1.7e-18 97.4 102 55.9
Carub.0001s3729 Capsella rubella HOM05D007246 ORTHO05D009066 3.7e-18 96.3 90 60.0
Migut.C01135 Erythranthe guttata HOM05D007246 ORTHO05D009066 3.7e-18 96.3 100 50.0
Aa31LG10G5550 Aethionema arabicum HOM05D007246 ORTHO05D009066 4.8e-18 95.9 89 60.7
AT1G48200 Arabidopsis thaliana HOM05D007246 ORTHO05D009066 4.8e-18 95.9 102 53.9
Oeu040422.1 Olea europaea HOM05D007246 ORTHO05D009066 4.8e-18 95.9 82 61.0
AL1G54790 Arabidopsis lyrata HOM05D007246 ORTHO05D009066 8.2e-18 95.1 89 59.6
A06p47840 Brassica napus HOM05D007246 ORTHO05D009066 1.4e-17 94.4 102 54.9
BraA06t27654Z Brassica rapa HOM05D007246 ORTHO05D009066 1.4e-17 94.4 102 54.9
C06p02690 Brassica napus HOM05D007246 ORTHO05D009066 1.8e-17 94.0 98 56.1
BolC6t35395H Brassica oleracea HOM05D007246 ORTHO05D009066 1.8e-17 94.0 98 56.1
Thhalv10011824m.g Eutrema salsugineum HOM05D007246 ORTHO05D009066 1.8e-17 94.0 89 58.4
BcaC06g34651 Brassica carinata HOM05D007246 ORTHO05D009066 2.4e-17 93.6 96 55.2
C07p26120 Brassica napus HOM05D007246 ORTHO05D009066 2.4e-17 93.6 96 55.2
BolC7t43138H Brassica oleracea HOM05D007246 ORTHO05D009066 2.4e-17 93.6 96 55.2
MSTRG.1448 Avicennia marina HOM05D007246 ORTHO05D009066 3.1e-17 93.2 97 49.5
A06p04630 Brassica napus HOM05D007246 ORTHO05D009066 5.3e-17 92.4 103 53.4
Sp1g35170 Schrenkiella parvula HOM05D007246 ORTHO05D009066 5.3e-17 92.4 95 53.7
CDE06G1719 Ceratophyllum demersum HOM05D007246 ORTHO05D009066 9.1e-17 91.7 84 54.8
ECA248G1302 Erigeron canadensis HOM05D007246 ORTHO05D009066 9.1e-17 91.7 96 50.0
BcaC08g43014 Brassica carinata HOM05D007246 ORTHO05D009066 1.2e-16 91.3 98 55.1
BraA06t23667Z Brassica rapa HOM05D007246 ORTHO05D009066 2.7e-16 90.1 102 53.9
unitig_37.g12972 Utricularia gibba HOM05D007246 ORTHO05D009066 2.2e-15 87.0 84 53.6
SGA_v2.0_scaffold24G10465 Striga asiatica HOM05D007246 ORTHO05D009066 8.5e-15 85.1 91 47.3
THA.LOC104821809 Tarenaya hassleriana HOM05D007246 ORTHO05D009066 1.1e-14 84.7 86 53.5
ATR0716G022 Amborella trichopoda HOM05D007246 ORTHO05D009066 1.4e-12 77.8 77 51.9
CARHR037830 Cardamine hirsuta HOM05D007246 ORTHO05D009066 1.4e-12 77.8 77 53.2
SalBow7G0738 Salvia bowleyana HOM05D007246 ORTHO05D009066 1.2e-11 74.7 98 40.8
SGA_v2.0_scaffold52G18970 Striga asiatica HOM05D007246 ORTHO05D009066 7.5e-11 72.0 99 37.4
Os06g0149500 Oryza sativa ssp. japonica HOM05D007246 ORTHO05D009066 3.7e-10 69.7 93 44.1
Carub.0007s3396 Capsella rubella HOM05D007246 ORTHO05D009066 2.4e-09 67.0 81 50.6
BcaB07g33783 Brassica carinata HOM05D007246 ORTHO05D009066 4.1e-09 66.2 90 50.0
FAN20G0163 Fragaria x ananassa HOM05D007246 ORTHO05D009066 9.1e-09 65.1 63 50.8
BcaB07g33731 Brassica carinata HOM05D007246 ORTHO05D009066 1.6e-08 64.3 59 59.3
BcaB07g33733 Brassica carinata HOM05D007246 ORTHO05D009066 1.6e-08 64.3 59 59.3
Peaxi162Scf17552g00001 Petunia axillaris HOM05D007246 ORTHO05D009066 2.0e-08 63.9 62 51.6
HPP92_002815 Vanilla planifolia HOM05D007246 ORTHO05D009066 2.0e-08 63.9 72 50.0
Lsat_1_v5_gn_4_16480 Lactuca sativa HOM05D007246 ORTHO05D009066 9.4e-06 55.1 35 62.9


User provided reference genes

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