Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 8.2e-88 327.0 165 100.0
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 9.5e-52 207.2 165 61.2
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.8e-51 205.7 166 60.2
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 2.6e-49 199.1 167 64.7
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.7e-48 196.4 164 62.8
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.0e-46 188.0 165 57.0
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.0e-45 187.2 164 56.7
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 1.3e-45 186.8 168 57.7
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.7e-45 186.4 165 57.0
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 2.3e-45 186.0 166 56.0
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 5.1e-45 184.9 172 56.4
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.9e-44 183.0 165 55.8
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 3.3e-44 182.2 169 57.4
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 7.3e-44 181.0 160 58.1
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 9.5e-44 180.6 165 57.6
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 3.6e-43 178.7 160 58.8
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 4.7e-43 178.3 152 60.5
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.1e-42 177.2 173 53.8
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.1e-42 177.2 172 54.1
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 2.3e-42 176.0 130 69.2
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 2.3e-42 176.0 167 56.3
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.2e-41 173.7 166 57.8
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 4.4e-41 171.8 166 51.8
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 4.4e-41 171.8 166 58.4
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 2.9e-40 169.1 166 54.2
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 7.8e-38 161.0 158 55.1
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.8e-38 161.0 168 53.6
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.0e-37 160.6 168 53.6
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.3e-37 160.2 168 53.0
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 6.6e-37 157.9 155 55.5
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 8.6e-37 157.5 158 52.5
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 3.3e-36 155.6 160 51.9
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.3e-36 155.2 159 54.7
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 7.3e-36 154.5 169 47.3
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 7.3e-36 154.5 164 51.8
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 9.6e-36 154.1 170 48.8
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 2.1e-35 152.9 168 48.8
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 4.7e-35 151.8 176 51.1
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 6.2e-35 151.4 167 48.5
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-34 150.6 173 51.4
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.1e-34 149.1 147 55.8
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 4.0e-34 148.7 158 53.2
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 2.6e-33 146.0 157 51.6
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 3.4e-33 145.6 158 52.5
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.4e-33 145.6 176 50.0
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 3.4e-33 145.6 79 87.3
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 1.3e-32 143.7 167 49.7
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.7e-32 143.3 157 51.6
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 1.7e-32 143.3 167 49.1
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.9e-32 141.7 168 49.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 2.4e-31 139.4 143 53.8
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 3.2e-31 139.0 165 49.1
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 3.2e-31 139.0 157 50.3
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 4.2e-31 138.7 134 51.5
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 5.4e-31 138.3 168 46.4
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 7.1e-31 137.9 127 55.1
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 2.1e-30 136.3 168 46.4
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 3.9e-29 132.1 148 52.7
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 6.6e-29 131.3 163 47.2
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 1.3e-27 127.1 173 47.4
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 2.1e-27 126.3 151 41.7
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 3.6e-27 125.6 194 43.3
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 2.4e-26 122.9 136 47.8
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 9.0e-26 120.9 111 52.3
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 1.3e-24 117.1 132 53.8
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 2.9e-24 115.9 154 44.8
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 3.2e-23 112.5 127 46.5
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 9.3e-23 110.9 111 49.5
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 7.9e-22 107.8 124 50.8
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 1.3e-21 107.1 169 41.4
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 3.0e-21 105.9 163 39.3
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 6.7e-21 104.8 140 43.6
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 6.7e-21 104.8 138 45.7
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 1.5e-20 103.6 121 48.8
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 2.8e-19 99.4 139 43.9
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 8.1e-19 97.8 138 42.8
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.4e-18 97.1 97 51.5
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 1.5e-17 93.6 123 46.3
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 2.6e-17 92.8 135 43.7
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.7e-16 90.1 171 37.4
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 1.0e-08 64.3 115 35.7


User provided reference genes

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