Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0501 Trochodendron aralioides HOM05D000257 ORTHO05D009178 4.8e-67 257.7 128 100.0
TAR629G0879 Trochodendron aralioides HOM05D000257 ORTHO05D009178 4.8e-59 231.1 115 100.0
GSVIVG01033205001 Vitis vinifera HOM05D000257 ORTHO05D009178 7.9e-38 160.6 97 79.4
GSVIVG01020990001 Vitis vinifera HOM05D000257 ORTHO05D009178 1.0e-37 160.2 97 78.4
ClCG03G014220 Citrullus lanatus HOM05D000257 ORTHO05D009178 1.8e-37 159.5 112 67.9
Nn4g25087 Nelumbo nucifera HOM05D000257 ORTHO05D009178 3.0e-37 158.7 113 68.1
Cfa006889 Carpinus fangiana HOM05D000257 ORTHO05D009178 3.9e-37 158.3 108 68.5
CsaV3_1G042010 Cucumis sativus L. HOM05D000257 ORTHO05D009178 3.9e-37 158.3 107 69.2
Glyma.11G203100 Glycine max HOM05D000257 ORTHO05D009178 8.8e-37 157.1 97 73.2
Phvul.006G083700 Phaseolus vulgaris HOM05D000257 ORTHO05D009178 8.8e-37 157.1 97 75.3
Potri.002G245100 Populus trichocarpa HOM05D000257 ORTHO05D009178 1.5e-36 156.4 112 71.4
Sabra02G0186500 Salix brachista HOM05D000257 ORTHO05D009178 1.5e-36 156.4 112 71.4
CANSAT01G2405 Cannabis sativa HOM05D000257 ORTHO05D009178 2.5e-36 155.6 98 73.5
Haze_03863 Corylus avellana HOM05D000257 ORTHO05D009178 2.5e-36 155.6 96 74.0
arahy.Tifrunner.gnm1.ann1.PK7WRQ Arachis hypogaea HOM05D000257 ORTHO05D009178 3.3e-36 155.2 97 73.2
Lj6g0000577 Lotus japonicus HOM05D000257 ORTHO05D009178 5.7e-36 154.5 97 72.2
Thecc.02G213100 Theobroma cacao HOM05D000257 ORTHO05D009178 9.7e-36 153.7 116 68.1
THA.LOC104815842 Tarenaya hassleriana HOM05D000257 ORTHO05D009178 1.3e-35 153.3 98 75.5
CiPaw.06G064100 Carya illinoinensis HOM05D000257 ORTHO05D009178 1.7e-35 152.9 110 65.5
Duzib093G1032 Durio zibethinus HOM05D000257 ORTHO05D009178 2.2e-35 152.5 117 65.8
FvH4_3g11420 Fragaria vesca HOM05D000257 ORTHO05D009178 2.2e-35 152.5 110 63.6
Potri.002G244900 Populus trichocarpa HOM05D000257 ORTHO05D009178 2.2e-35 152.5 112 69.6
Ciclev10018363m.g Citrus clementina HOM05D000257 ORTHO05D009178 4.8e-35 151.4 100 74.0
Prupe.4G102100 Prunus persica HOM05D000257 ORTHO05D009178 4.8e-35 151.4 96 72.9
QL03p016896 Quercus lobata HOM05D000257 ORTHO05D009178 4.8e-35 151.4 96 71.9
Sed0011629 Sechium edule HOM05D000257 ORTHO05D009178 4.8e-35 151.4 115 60.9
VMungo0540G0435 Vigna mungo HOM05D000257 ORTHO05D009178 4.8e-35 151.4 97 74.2
Manes.18G104900 Manihot esculenta HOM05D000257 ORTHO05D009178 6.3e-35 151.0 97 76.3
MBI06_g27511_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D009178 8.2e-35 150.6 95 78.9
Gohir.A04G067300 Gossypium hirsutum HOM05D000257 ORTHO05D009178 1.8e-34 149.4 116 65.5
Lalb_Chr15g0085471 Lupinus albus HOM05D000257 ORTHO05D009178 1.8e-34 149.4 108 64.8
Hma1.2p1_0085F.1_g043990 Hydrangea macrophylla HOM05D000257 ORTHO05D009178 2.4e-34 149.1 105 72.4
arahy.Tifrunner.gnm1.ann1.3HIG3T Arachis hypogaea HOM05D000257 ORTHO05D009178 3.1e-34 148.7 115 62.6
FAN16G0729 Fragaria x ananassa HOM05D000257 ORTHO05D009178 3.1e-34 148.7 105 64.8
CSS0040955 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D009178 4.1e-34 148.3 113 69.0
Ca_15103_v3 Cicer arietinum L. HOM05D000257 ORTHO05D009178 4.1e-34 148.3 103 68.0
Aqoxy1G01888 Aquilegia oxysepala HOM05D000257 ORTHO05D009178 5.3e-34 147.9 106 69.8
Hma1.2p1_0085F.1_g043930 Hydrangea macrophylla HOM05D000257 ORTHO05D009178 6.9e-34 147.5 105 72.4
Sc07g0001480 Simmondsia chinensis HOM05D000257 ORTHO05D009178 6.9e-34 147.5 117 65.8
Medtr3g063230 Medicago truncatula HOM05D000257 ORTHO05D009178 1.2e-33 146.7 106 66.0
Rhsim10G0187400 Rhododendron simsii HOM05D000257 ORTHO05D009178 1.2e-33 146.7 98 72.4
Aa31LG1G7460 Aethionema arabicum HOM05D000257 ORTHO05D009178 2.0e-33 146.0 98 72.4
Psat5g144760 Pisum sativum HOM05D000257 ORTHO05D009178 2.0e-33 146.0 96 69.8
Dinv42707 Davidia involucrata HOM05D000257 ORTHO05D009178 2.6e-33 145.6 98 70.4
C05p04700 Brassica napus HOM05D000257 ORTHO05D009178 3.4e-33 145.2 98 70.4
BolC5t29242H Brassica oleracea HOM05D000257 ORTHO05D009178 3.4e-33 145.2 98 70.4
A10p05110 Brassica napus HOM05D000257 ORTHO05D009178 5.9e-33 144.4 98 70.4
BraA10t42776Z Brassica rapa HOM05D000257 ORTHO05D009178 5.9e-33 144.4 98 70.4
Sp1g05200 Schrenkiella parvula HOM05D000257 ORTHO05D009178 5.9e-33 144.4 98 69.4
CARHR006050 Cardamine hirsuta HOM05D000257 ORTHO05D009178 7.7e-33 144.1 96 71.9
MELO3C015617.2 Cucumis melo HOM05D000257 ORTHO05D009178 1.3e-32 143.3 91 72.5
Gohir.D04G106000 Gossypium hirsutum HOM05D000257 ORTHO05D009178 1.3e-32 143.3 116 63.8
Gorai.009G409900 Gossypium raimondii HOM05D000257 ORTHO05D009178 1.3e-32 143.3 116 63.8
Thhalv10007863m.g Eutrema salsugineum HOM05D000257 ORTHO05D009178 1.7e-32 142.9 96 70.8
ECA236G3979 Erigeron canadensis HOM05D000257 ORTHO05D009178 2.9e-32 142.1 97 70.1
AL1G16450 Arabidopsis lyrata HOM05D000257 ORTHO05D009178 5.0e-32 141.4 95 71.6
Lsat_1_v5_gn_8_63660 Lactuca sativa HOM05D000257 ORTHO05D009178 5.0e-32 141.4 114 62.3
Carub.0001s0580 Capsella rubella HOM05D000257 ORTHO05D009178 6.5e-32 141.0 96 70.8
vmacro20435 Vaccinium macrocarpon HOM05D000257 ORTHO05D009178 6.5e-32 141.0 95 71.6
CDE07G1348 Ceratophyllum demersum HOM05D000257 ORTHO05D009178 1.1e-31 140.2 98 68.4
PGR004G2170 Punica granatum HOM05D000257 ORTHO05D009178 1.1e-31 140.2 95 68.4
AT1G06440 Arabidopsis thaliana HOM05D000257 ORTHO05D009178 2.5e-31 139.0 96 68.8
SalBow5G0247 Salvia bowleyana HOM05D000257 ORTHO05D009178 3.2e-31 138.7 100 68.0
Cc07_g12550 Coffea canephora HOM05D000257 ORTHO05D009178 5.5e-31 137.9 100 70.0
Cpa.g.sc199.15 Carica papaya HOM05D000257 ORTHO05D009178 9.4e-31 137.1 99 70.7
Hund28145 Selenicereus undatus HOM05D000257 ORTHO05D009178 9.4e-31 137.1 91 71.4
Hund28148 Selenicereus undatus HOM05D000257 ORTHO05D009178 9.4e-31 137.1 91 71.4
Atru.chr6.2753 Acer truncatum HOM05D000257 ORTHO05D009178 1.2e-30 136.7 102 68.6
Oeu002676.1 Olea europaea HOM05D000257 ORTHO05D009178 1.2e-30 136.7 94 71.3
SGA_v2.0_scaffold199G41255 Striga asiatica HOM05D000257 ORTHO05D009178 1.6e-30 136.3 94 71.3
Ah.04g150860 Amaranthus hybridus HOM05D000257 ORTHO05D009178 6.1e-30 134.4 118 60.2
PGSC0003DMG401017729 Solanum tuberosum HOM05D000257 ORTHO05D009178 6.1e-30 134.4 103 64.1
Solyc02g081530.1 Solanum lycopersicum HOM05D000257 ORTHO05D009178 7.9e-30 134.0 100 66.0
Sopen02g026160 Solanum pennellii HOM05D000257 ORTHO05D009178 7.9e-30 134.0 100 66.0
Eucgr.I00443 Eucalyptus grandis HOM05D000257 ORTHO05D009178 2.3e-29 132.5 101 67.3
ATR0618G155 Amborella trichopoda HOM05D000257 ORTHO05D009178 5.1e-29 131.3 95 67.4
AUR62039037 Chenopodium quinoa HOM05D000257 ORTHO05D009178 3.3e-28 128.6 110 59.1
MSTRG.15616 Avicennia marina HOM05D000257 ORTHO05D009178 5.7e-28 127.9 94 68.1
Migut.I00362 Erythranthe guttata HOM05D000257 ORTHO05D009178 2.8e-27 125.6 94 68.1
unitig_748.g7014 Utricularia gibba HOM05D000257 ORTHO05D009178 4.8e-27 124.8 96 64.6
SHI31601 Sapria himalayana HOM05D000257 ORTHO05D009178 6.5e-24 114.4 96 60.4
COL.COLO4_22317 Corchorus olitorius HOM05D000257 ORTHO05D009178 1.1e-23 113.6 73 75.3
arahy.Tifrunner.gnm1.ann1.AETP6W Arachis hypogaea HOM05D000257 ORTHO05D009178 3.6e-22 108.6 71 66.2
TPR.G37321 Trifolium pratense HOM05D000257 ORTHO05D009178 2.3e-21 105.9 69 73.9
EL10Ac3g07268 Beta vulgaris HOM05D000257 ORTHO05D009178 3.0e-21 105.5 73 67.1
Hma1.2p1_0316F.1_g122790 Hydrangea macrophylla HOM05D000257 ORTHO05D009178 4.0e-21 105.1 73 69.9
Gorai.007G131600 Gossypium raimondii HOM05D000257 ORTHO05D009178 5.2e-21 104.8 92 62.0
HanXRQChr05g0144031 Helianthus annuus HOM05D000257 ORTHO05D009178 6.7e-21 104.4 75 66.7
AUR62004731 Chenopodium quinoa HOM05D000257 ORTHO05D009178 5.7e-20 101.3 73 63.0
AUR62037529 Chenopodium quinoa HOM05D000257 ORTHO05D009178 5.7e-20 101.3 73 63.0
Nitab4.5_0006392g0070 Nicotiana tabacum HOM05D000257 ORTHO05D009178 7.0e-18 94.4 80 57.5
Actinidia33002 Actinidia chinensis HOM05D000257 ORTHO05D009178 9.1e-18 94.0 86 57.0
SEGI_00364 Sequoiadendron giganteum HOM05D000257 ORTHO05D009178 2.6e-17 92.4 94 45.7
Nitab4.5_0000108g0040 Nicotiana tabacum HOM05D000257 ORTHO05D009178 3.5e-17 92.0 78 56.4
Peaxi162Scf00344g01711 Petunia axillaris HOM05D000257 ORTHO05D009178 3.8e-16 88.6 75 57.3
HPP92_012880 Vanilla planifolia HOM05D000257 ORTHO05D009178 2.1e-14 82.8 90 53.3
VMungo1383G0521 Vigna mungo HOM05D000257 ORTHO05D009735 2.2e-08 62.8 111 31.5
DCAR_003386 Daucus carota HOM05D000257 ORTHO05D009178 3.8e-08 62.0 50 62.0
TAR626G1153 Trochodendron aralioides HOM05D000257 ORTHO05D009735 6.5e-08 61.2 81 38.3
ATR0712G149 Amborella trichopoda HOM05D000257 ORTHO05D009735 8.5e-08 60.8 89 37.1
Phvul.001G116700 Phaseolus vulgaris HOM05D000257 ORTHO05D009735 1.1e-07 60.5 111 30.6
Psat3g082280 Pisum sativum HOM05D000257 ORTHO05D009735 4.2e-07 58.5 105 29.5
Glyma.19G125100 Glycine max HOM05D000257 ORTHO05D009735 7.2e-07 57.8 94 34.0
Solyc10g077100.1 Solanum lycopersicum HOM05D000257 ORTHO05D009735 7.2e-07 57.8 88 33.0
TAR636G0724 Trochodendron aralioides HOM05D000257 ORTHO05D009129 7.2e-07 57.8 101 32.7
Aqoxy5G03965 Aquilegia oxysepala HOM05D000257 ORTHO05D009129 1.2e-06 57.0 93 36.6
Haze_03012 Corylus avellana HOM05D000257 ORTHO05D009735 2.1e-06 56.2 103 26.2
Haze_03019 Corylus avellana HOM05D000257 ORTHO05D009735 2.1e-06 56.2 103 26.2
Lsat_1_v5_gn_7_61661 Lactuca sativa HOM05D000351 ORTHO05D009735 2.1e-06 56.2 90 31.1
Lj1g0012998 Lotus japonicus HOM05D000257 ORTHO05D009735 2.1e-06 56.2 106 27.4
MBI04_g33645_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D009129 2.1e-06 56.2 93 35.5
Sopen10g028780 Solanum pennellii HOM05D000257 ORTHO05D009735 2.1e-06 56.2 88 33.0
CSS0046397 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D009735 2.7e-06 55.8 88 31.8
Psat6g206560 Pisum sativum HOM05D000257 ORTHO05D009129 2.7e-06 55.8 101 33.7
Lalb_Chr01g0009191 Lupinus albus HOM05D000257 ORTHO05D009129 3.6e-06 55.5 102 31.4
PGSC0003DMG400040378 Solanum tuberosum HOM05D000257 ORTHO05D009735 3.6e-06 55.5 88 31.8
TPR.G27965 Trifolium pratense HOM05D000257 ORTHO05D009735 3.6e-06 55.5 94 30.9
Aa31LG9G7290 Aethionema arabicum HOM05D000257 ORTHO05D009735 4.7e-06 55.1 82 31.7
MBI13_g10956_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D009735 4.7e-06 55.1 100 30.0
THA.LOC104814969 Tarenaya hassleriana HOM05D000257 ORTHO05D009735 4.7e-06 55.1 82 26.8
CANSAT78G2275 Cannabis sativa HOM05D000257 ORTHO05D009129 6.1e-06 54.7 93 35.5
Gohir.A01G096500 Gossypium hirsutum HOM05D000257 ORTHO05D009735 6.1e-06 54.7 103 27.2
Os10g0510300 Oryza sativa ssp. japonica HOM05D000257 ORTHO05D009178 8.0e-06 54.3 79 38.0


User provided reference genes

Program Settings