Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.9e-203 712.2 346 100.0
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 2.6e-168 595.5 346 82.4
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.2e-165 586.6 344 82.3
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 9.6e-163 577.0 346 78.6
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 6.2e-162 574.3 341 80.6
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 6.2e-162 574.3 346 80.9
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 2.4e-161 572.4 345 78.0
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 4.9e-159 564.7 346 78.0
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 6.4e-159 564.3 344 78.2
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 6.4e-159 564.3 345 76.5
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.1e-158 563.5 347 76.9
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 1.1e-158 563.5 340 79.4
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.4e-158 563.1 344 77.9
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 1.6e-157 559.7 340 79.1
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 2.3e-156 555.8 346 76.0
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 2.5e-155 552.4 345 75.7
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 5.6e-155 551.2 345 75.9
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 7.4e-155 550.8 348 76.4
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.8e-154 548.9 348 76.4
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 2.8e-154 548.9 333 78.4
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.8e-154 548.1 345 75.4
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 4.8e-154 548.1 337 76.3
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.1e-153 547.0 342 76.0
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 1.1e-153 547.0 342 75.7
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.4e-153 546.6 343 76.4
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 1.4e-153 546.6 343 75.8
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 1.4e-153 546.6 342 76.3
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 3.1e-153 545.4 333 77.8
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 3.1e-153 545.4 343 76.7
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 6.9e-153 544.3 347 75.2
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 9.0e-153 543.9 345 75.1
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 1.5e-152 543.1 345 74.8
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 1.3e-151 540.0 346 74.9
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 1.3e-151 540.0 348 74.7
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 3.8e-151 538.5 344 76.2
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 4.9e-151 538.1 343 75.2
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 6.4e-151 537.7 344 74.1
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 8.4e-151 537.3 348 73.0
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 1.1e-150 537.0 347 76.1
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 1.9e-150 536.2 348 74.1
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 1.9e-150 536.2 343 74.6
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 4.2e-150 535.0 344 73.5
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 7.1e-150 534.3 344 73.5
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 1.2e-149 533.5 335 77.3
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.1e-149 532.7 346 74.3
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 3.5e-149 531.9 346 72.3
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.0e-148 530.4 344 72.7
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 1.8e-148 529.6 375 70.1
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.8e-148 529.6 344 72.7
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 3.0e-148 528.9 344 73.0
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.9e-147 526.2 375 68.0
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 1.9e-147 526.2 348 71.3
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 2.5e-147 525.8 345 71.6
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 2.5e-147 525.8 346 73.4
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 4.3e-147 525.0 343 72.3
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 1.3e-146 523.5 346 73.1
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 8.2e-146 520.8 348 70.1
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 2.4e-145 519.2 362 70.7
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 6.9e-145 517.7 346 74.0
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 2.6e-144 515.8 347 71.2
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 3.4e-144 515.4 342 72.2
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 2.2e-143 512.7 349 71.3
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 2.9e-143 512.3 347 73.2
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 1.1e-142 510.4 407 63.6
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 1.4e-142 510.0 344 73.3
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 3.2e-142 508.8 335 75.5
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 9.3e-142 507.3 350 68.9
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 9.3e-142 507.3 349 72.8
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 2.1e-141 506.1 346 73.1
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 6.0e-141 504.6 343 70.8
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 1.0e-140 503.8 350 68.0
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.3e-140 503.4 344 73.8
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 1.8e-140 503.1 344 70.9
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.8e-140 503.1 349 70.2
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 2.3e-140 502.7 350 72.0
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 2.3e-140 502.7 350 72.0
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 3.0e-140 502.3 349 72.5
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 3.0e-140 502.3 344 70.1
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 5.1e-140 501.5 350 71.7
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 8.7e-140 500.7 346 71.1
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 3.3e-139 498.8 344 69.8
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 7.4e-139 497.7 327 72.5
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 6.3e-138 494.6 282 83.3
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 6.3e-138 494.6 348 71.0
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.4e-137 493.4 347 70.0
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 1.8e-137 493.0 349 68.5
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 1.3e-135 486.9 341 71.0
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 2.2e-135 486.1 350 68.9
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 2.9e-135 485.7 328 70.7
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 6.5e-135 484.6 346 66.2
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.1e-134 483.8 347 69.2
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 4.2e-134 481.9 347 68.6
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 5.5e-134 481.5 355 67.3
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 1.6e-133 479.9 323 71.8
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 1.6e-133 479.9 343 67.9
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 4.6e-133 478.4 301 77.1
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 5.1e-132 474.9 344 67.7
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 6.7e-132 474.6 344 66.0
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 8.8e-132 474.2 291 75.6
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 1.9e-131 473.0 348 66.4
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 2.2e-119 433.0 333 64.6
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 2.9e-119 432.6 324 65.7
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 3.6e-117 425.6 250 77.2
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 3.6e-117 425.6 233 82.8
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 7.4e-115 417.9 250 76.4
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 8.2e-114 414.5 246 76.4
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.1e-113 414.1 251 80.1
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 5.2e-108 395.2 330 62.1
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 9.7e-107 391.0 302 62.9
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 1.6e-104 383.6 324 62.7
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 5.4e-97 358.6 327 56.9
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.5e-96 355.9 239 74.1
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 5.9e-96 355.1 232 72.4
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 2.9e-95 352.8 240 72.1
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.0e-91 340.1 241 68.9
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.6e-91 339.7 241 68.9
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 1.7e-87 327.0 240 68.3
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.4e-84 317.4 330 52.1
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 4.9e-82 308.9 242 60.7
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 1.7e-71 273.9 165 80.6
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 1.8e-68 263.8 173 73.4
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.6e-64 250.8 200 63.0
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.5e-62 244.2 200 62.5
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 1.2e-61 241.1 245 50.6
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 1.8e-52 210.7 199 51.3
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 5.4e-49 199.1 180 56.1
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 3.0e-47 193.4 181 56.9
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 6.2e-29 132.5 73 86.3
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 1.9e-25 120.9 79 70.9
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 7.7e-19 99.0 57 73.7
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 2.5e-09 67.4 53 62.3


User provided reference genes

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