Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 5.6e-146 521.2 308 100.0
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 7.9e-92 341.3 320 65.0
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 1.1e-80 304.3 317 59.3
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 4.1e-80 302.4 313 56.9
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 1.0e-78 297.7 328 61.6
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 1.1e-77 294.3 316 65.2
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 2.7e-76 289.7 314 62.4
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 4.6e-76 288.9 317 58.7
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 7.9e-76 288.1 296 58.4
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 5.1e-75 285.4 246 66.3
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 3.3e-74 282.7 314 57.6
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 5.3e-72 275.4 313 55.0
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 5.3e-72 275.4 313 55.0
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 2.0e-71 273.5 311 56.3
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 4.5e-71 272.3 324 54.3
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 4.7e-68 262.3 323 62.2
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 6.1e-68 261.9 320 54.1
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 6.1e-68 261.9 325 52.3
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 1.4e-67 260.8 315 60.0
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 1.8e-67 260.4 317 57.7
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 3.9e-67 259.2 314 49.4
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 3.9e-67 259.2 312 53.2
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 6.7e-67 258.5 315 50.5
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 1.1e-66 257.7 314 50.3
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 9.7e-66 254.6 322 49.4
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 1.3e-65 254.2 316 49.7
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 3.7e-65 252.7 319 49.2
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 1.4e-64 250.8 250 57.2
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 4.1e-64 249.2 328 56.7
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 1.5e-63 247.3 311 53.7
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 2.0e-63 246.9 312 48.4
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 2.0e-63 246.9 239 59.0
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 2.0e-63 246.9 311 53.4
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 2.0e-63 246.9 311 53.4
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 4.5e-63 245.7 326 56.4
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 2.9e-62 243.0 310 59.0
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 5.0e-62 242.3 311 59.5
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 5.0e-62 242.3 252 57.1
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 5.5e-61 238.8 320 50.0
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 5.5e-61 238.8 309 57.3
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 1.6e-60 237.3 309 52.8
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 2.7e-60 236.5 346 54.0
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 4.7e-60 235.7 322 46.9
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 2.3e-59 233.4 313 55.0
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 2.6e-58 229.9 318 48.1
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 4.4e-58 229.2 318 48.1
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 5.7e-58 228.8 318 47.2
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 9.7e-58 228.0 319 47.3
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 9.7e-58 228.0 310 49.7
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 3.7e-57 226.1 249 55.4
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 4.1e-56 222.6 310 54.5
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 2.1e-52 210.3 268 51.9
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 2.4e-48 196.8 232 54.7
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 7.2e-45 185.3 171 58.5
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 4.4e-42 176.0 268 44.0
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 2.2e-41 173.7 225 46.7
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 7.7e-39 165.2 241 44.0
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 2.3e-38 163.7 241 43.6
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 2.0e-34 150.6 152 57.9
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 2.4e-32 143.7 289 38.8
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 7.0e-32 142.1 186 50.5
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 2.3e-30 137.1 125 62.4
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 7.3e-29 132.1 184 47.3
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 2.8e-28 130.2 281 37.4
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 1.7e-25 120.9 168 44.6
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 2.3e-22 110.5 175 55.4
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 3.0e-22 110.2 98 66.3
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 1.5e-18 97.8 111 46.8
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 4.4e-18 96.3 99 56.6
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 2.2e-09 67.4 57 68.4
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 2.2e-09 67.4 57 68.4
Peaxi162Scf00925g00015 Petunia axillaris HOM05D008049 ORTHO05D010198 4.6e-07 59.7 92 39.1
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 2.3e-06 57.4 53 64.2


User provided reference genes

Program Settings