Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0468 Trochodendron aralioides HOM05D006770 ORTHO05D008356 3.7e-51 204.5 100 100.0
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 3.7e-14 81.6 97 51.5
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 6.2e-14 80.9 92 55.4
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 8.1e-14 80.5 97 50.5
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 4.0e-13 78.2 92 52.2
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 9.0e-13 77.0 92 51.1
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 4.5e-12 74.7 92 50.0
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 1.0e-11 73.6 91 48.4
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 1.3e-11 73.2 92 48.9
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 1.7e-11 72.8 90 51.1
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 2.9e-11 72.0 90 50.0
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 2.9e-11 72.0 99 48.5
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 6.5e-11 70.9 90 48.9
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 6.5e-11 70.9 91 47.3
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 6.5e-11 70.9 92 48.9
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 6.5e-11 70.9 95 46.3
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 8.4e-11 70.5 88 50.0
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 8.4e-11 70.5 92 47.8
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 8.4e-11 70.5 90 45.6
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 8.4e-11 70.5 90 48.9
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 1.1e-10 70.1 90 47.8
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 1.1e-10 70.1 96 45.8
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 1.4e-10 69.7 98 44.9
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 1.4e-10 69.7 97 46.4
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.5e-10 68.9 91 47.3
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 3.2e-10 68.6 91 48.4
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 3.2e-10 68.6 93 46.2
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 3.2e-10 68.6 91 47.3
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 4.2e-10 68.2 86 46.5
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 4.2e-10 68.2 95 44.2
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 5.5e-10 67.8 91 46.2
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 9.3e-10 67.0 91 44.0
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 9.3e-10 67.0 88 47.7
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 9.3e-10 67.0 109 42.2
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 9.3e-10 67.0 95 46.3
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 1.6e-09 66.2 92 45.7
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 1.6e-09 66.2 89 47.2
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 1.6e-09 66.2 88 44.3
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 2.1e-09 65.9 88 46.6
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 2.1e-09 65.9 87 46.0
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 2.7e-09 65.5 96 44.8
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 2.7e-09 65.5 88 46.6
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 3.5e-09 65.1 95 44.2
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 3.5e-09 65.1 93 45.2
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 4.6e-09 64.7 91 45.1
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 4.6e-09 64.7 88 45.5
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 6.0e-09 64.3 92 43.5
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 7.9e-09 63.9 85 44.7
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 1.0e-08 63.5 84 44.0
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 1.8e-08 62.8 90 42.2
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 3.0e-08 62.0 88 45.5
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 3.0e-08 62.0 88 45.5
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 3.0e-08 62.0 91 42.9
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 3.0e-08 62.0 78 48.7
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 3.0e-08 62.0 84 44.0
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 3.0e-08 62.0 88 44.3
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 3.0e-08 62.0 88 44.3
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 3.9e-08 61.6 96 41.7
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 3.9e-08 61.6 96 41.7
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 3.9e-08 61.6 85 43.5
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 8.7e-08 60.5 94 41.5
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 1.5e-07 59.7 97 40.2
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 1.5e-07 59.7 87 40.2
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 1.9e-07 59.3 91 41.8
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 2.5e-07 58.9 96 40.6
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 3.3e-07 58.5 90 41.1
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 3.3e-07 58.5 84 42.9
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 3.3e-07 58.5 84 41.7
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 3.3e-07 58.5 88 43.2
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 5.7e-07 57.8 88 42.0
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 5.7e-07 57.8 91 38.5
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 9.6e-07 57.0 84 41.7
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 2.1e-06 55.8 91 40.7
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 2.1e-06 55.8 80 43.8
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 2.1e-06 55.8 81 42.0
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 2.8e-06 55.5 79 43.0
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 4.8e-06 54.7 92 40.2
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 8.2e-06 53.9 80 42.5


User provided reference genes

Program Settings