Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 1.8e-252 875.5 481 100.0
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 3.0e-106 389.8 519 53.4
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 8.2e-96 355.1 493 52.1
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 2.7e-91 340.1 497 48.5
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 2.0e-89 334.0 487 49.7
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 2.5e-84 317.0 500 48.2
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.8e-82 310.8 483 47.2
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 1.3e-80 304.7 524 44.3
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 8.3e-80 302.0 513 44.4
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.1e-79 301.6 429 49.7
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.1e-79 300.1 533 43.7
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.3e-77 294.7 553 42.7
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 1.3e-77 294.7 509 44.2
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.9e-77 293.5 505 45.0
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 6.1e-75 285.8 487 44.8
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 6.1e-75 285.8 518 43.2
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 8.0e-75 285.4 477 44.4
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 7.5e-73 278.9 493 44.0
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 2.2e-72 277.3 514 43.6
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 3.2e-71 273.5 487 42.9
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 7.0e-71 272.3 218 69.7
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 3.5e-70 270.0 503 43.1
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 4.6e-70 269.6 499 41.9
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 5.0e-69 266.2 481 45.3
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-66 257.7 530 43.8
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 1.8e-66 257.7 490 41.4
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 2.3e-66 257.3 488 42.2
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 4.0e-66 256.5 478 41.4
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 1.5e-65 254.6 524 39.3
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 1.1e-63 248.4 494 38.5
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 3.2e-63 246.9 479 41.3
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 3.2e-63 246.9 510 40.8
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 5.4e-63 246.1 507 40.8
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 2.7e-62 243.8 234 60.3
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.7e-62 243.8 479 41.1
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 3.5e-62 243.4 476 41.4
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 7.8e-62 242.3 486 39.7
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.7e-61 241.1 477 41.3
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 6.6e-61 239.2 517 38.3
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.9e-60 237.7 482 40.0
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 5.6e-60 236.1 484 38.2
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 2.1e-59 234.2 499 38.1
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 4.7e-59 233.0 460 40.7
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 4.7e-59 233.0 523 37.7
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.3e-58 230.7 482 38.8
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 5.2e-58 229.6 499 37.9
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 7.5e-57 225.7 507 38.5
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 4.9e-56 223.0 482 36.3
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 6.4e-56 222.6 470 36.8
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 1.9e-55 221.1 495 37.6
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 5.4e-55 219.5 488 37.9
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.6e-54 218.0 245 52.7
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 4.6e-54 216.5 217 55.8
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 4.6e-54 216.5 250 52.0
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 7.8e-54 215.7 512 35.2
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.3e-53 214.9 490 35.3
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 5.1e-53 213.0 480 35.6
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 2.5e-52 210.7 471 39.3
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 7.3e-52 209.1 490 35.1
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 9.5e-52 208.8 212 57.5
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 4.7e-51 206.5 482 35.9
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 3.1e-50 203.8 478 35.8
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 1.2e-49 201.8 169 66.3
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 1.5e-49 201.4 185 60.0
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 4.4e-49 199.9 472 35.4
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 9.9e-49 198.7 269 49.1
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 4.9e-48 196.4 491 34.6
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 5.4e-47 193.0 482 35.9
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.6e-46 191.4 482 34.6
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 6.6e-45 186.0 502 37.3
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 4.3e-44 183.3 509 33.2
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 1.6e-43 181.4 473 33.6
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 8.1e-43 179.1 474 32.9
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 8.1e-43 179.1 489 35.8
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.5e-41 174.9 476 33.6
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 4.4e-41 173.3 474 33.5
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.8e-40 170.2 372 40.6
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.5e-38 163.7 480 31.7
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.5e-38 163.7 480 31.7
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 1.0e-37 162.2 486 32.5
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.7e-37 161.4 473 31.5
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.4e-34 151.8 335 40.9
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 1.2e-30 138.7 492 35.4
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 6.6e-29 132.9 561 30.1
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 5.5e-23 113.2 221 34.4
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 2.1e-22 111.3 384 29.4
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.0e-22 109.8 94 63.8
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 5.1e-21 106.7 218 35.3
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 1.1e-18 99.0 116 48.3
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.0e-16 92.4 74 67.6
Lsat_1_v5_gn_2_25501 Lactuca sativa HOM05D007213 ORTHO05D009165 6.0e-14 83.2 80 62.5
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 1.3e-13 82.0 80 62.5
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 3.0e-13 80.9 80 60.0
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 8.7e-13 79.3 70 64.3
ATR0605G187 Amborella trichopoda HOM05D007213 ORTHO05D009165 2.5e-12 77.8 320 29.4
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 4.8e-11 73.6 123 40.7
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-10 71.6 119 45.4
HPP92_019588 Vanilla planifolia HOM05D007213 ORTHO05D009165 5.5e-07 60.1 130 39.2
SEGI_32576 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 7.9e-06 56.2 119 37.8


User provided reference genes

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