Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 3.9e-38 161.4 108 100.0
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 1.8e-19 99.4 90 83.3
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.5e-13 79.7 88 53.4
TAR376G0716 Trochodendron aralioides HOM05D007889 ORTHO05D009987 4.4e-13 78.2 89 76.4
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.8e-12 75.5 89 50.6
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 1.8e-11 72.8 92 52.2
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 5.9e-10 67.8 85 48.2
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 7.7e-10 67.4 86 58.1
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 2.2e-09 65.9 87 58.6
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 5.0e-09 64.7 97 50.5
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 6.5e-09 64.3 112 45.5
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.5e-08 63.2 86 44.2
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.9e-08 62.8 89 49.4
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 1.9e-08 62.8 88 45.5
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 2.5e-08 62.4 92 47.8
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.5e-08 62.4 88 51.1
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 5.5e-08 61.2 87 47.1
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 7.2e-08 60.8 87 44.8
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 7.2e-08 60.8 87 44.8
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 9.4e-08 60.5 88 46.6
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.2e-07 60.1 71 52.1
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.2e-07 60.1 86 40.7
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.2e-07 60.1 86 40.7
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.2e-07 60.1 90 43.3
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.2e-07 60.1 89 46.1
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.6e-07 59.7 88 43.2
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 4.7e-07 58.2 83 57.8
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 4.7e-07 58.2 86 43.0
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 6.1e-07 57.8 86 37.2
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 6.1e-07 57.8 87 44.8
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 8.0e-07 57.4 86 38.4
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.4e-06 56.6 94 41.5
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.4e-06 56.6 88 43.2
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 1.8e-06 56.2 91 39.6
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 1.8e-06 56.2 83 44.6
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 2.3e-06 55.8 86 41.9
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 3.0e-06 55.5 87 43.7
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.0e-06 55.5 87 43.7
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 3.0e-06 55.5 87 43.7
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 3.0e-06 55.5 105 39.0
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 4.0e-06 55.1 86 43.0
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 5.2e-06 54.7 87 43.7
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 5.2e-06 54.7 89 42.7
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 6.7e-06 54.3 86 36.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 6.7e-06 54.3 86 37.2
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 8.8e-06 53.9 88 39.8


User provided reference genes

Program Settings