Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 4.2e-56 221.1 110 100.0
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 8.6e-25 117.1 68 85.3
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 5.2e-22 107.8 75 73.3
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 6.8e-22 107.5 78 73.1
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.2e-21 106.7 76 73.7
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 2.0e-21 105.9 75 73.3
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 2.0e-21 105.9 81 70.4
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 4.4e-21 104.8 75 73.3
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 7.6e-21 104.0 76 68.4
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 7.6e-21 104.0 70 80.0
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 9.9e-21 103.6 72 73.6
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 9.9e-21 103.6 66 80.3
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 9.9e-21 103.6 80 67.5
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 1.3e-20 103.2 74 75.7
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 1.7e-20 102.8 74 70.3
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.7e-20 102.8 76 71.1
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.7e-20 102.8 76 67.1
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 1.7e-20 102.8 72 72.2
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.2e-20 102.4 75 73.3
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.9e-20 102.1 80 70.0
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 2.9e-20 102.1 80 68.8
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 2.9e-20 102.1 74 74.3
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 3.8e-20 101.7 74 70.3
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 6.4e-20 100.9 90 63.3
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 6.4e-20 100.9 78 69.2
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.1e-19 100.1 80 67.5
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 1.1e-19 100.1 86 62.8
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 1.1e-19 100.1 82 68.3
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 1.4e-19 99.8 74 70.3
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.9e-19 99.4 100 55.0
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.9e-19 99.4 80 70.0
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 1.9e-19 99.4 72 70.8
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 2.4e-19 99.0 76 71.1
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 2.4e-19 99.0 78 67.9
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 3.2e-19 98.6 79 69.6
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 7.1e-19 97.4 80 62.5
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.6e-18 96.3 77 63.6
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.1e-18 95.9 92 60.9
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 2.7e-18 95.5 77 66.2
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 3.5e-18 95.1 80 70.0
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 3.5e-18 95.1 80 70.0
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 3.5e-18 95.1 71 73.2
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 4.6e-18 94.7 85 61.2
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 6.0e-18 94.4 83 62.7
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 6.0e-18 94.4 86 59.3
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 7.8e-18 94.0 75 66.7
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.0e-17 93.6 72 63.9
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.7e-17 92.8 80 63.8
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.7e-17 92.8 80 63.8
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 1.7e-17 92.8 70 71.4
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.7e-17 92.8 87 58.6
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.7e-17 92.8 70 71.4
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 2.3e-17 92.4 70 71.4
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 3.0e-17 92.0 84 61.9
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 3.9e-17 91.7 73 69.9
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 5.1e-17 91.3 76 63.2
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.1e-17 91.3 76 63.2
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 6.6e-17 90.9 81 58.0
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 6.6e-17 90.9 86 58.1
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 8.7e-17 90.5 81 60.5
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 8.7e-17 90.5 86 58.1
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 8.7e-17 90.5 74 67.6
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 1.1e-16 90.1 79 62.0
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 1.9e-16 89.4 78 62.8
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.9e-16 89.4 86 58.1
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 3.3e-16 88.6 86 55.8
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 3.3e-16 88.6 88 53.4
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 4.3e-16 88.2 68 69.1
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.3e-16 88.2 71 66.2
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 4.3e-16 88.2 83 56.6
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 5.6e-16 87.8 74 64.9
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 5.6e-16 87.8 78 60.3
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 5.6e-16 87.8 70 70.0
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 5.6e-16 87.8 70 70.0
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 7.3e-16 87.4 69 60.9
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 9.6e-16 87.0 54 77.8
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 1.6e-15 86.3 88 58.0
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 1.6e-15 86.3 80 55.0
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 2.8e-15 85.5 81 56.8
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 2.8e-15 85.5 73 64.4
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 2.8e-15 85.5 83 60.2
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 3.6e-15 85.1 81 55.6
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 3.6e-15 85.1 81 56.8
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 3.6e-15 85.1 81 55.6
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 4.7e-15 84.7 87 54.0
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 6.2e-15 84.3 83 54.2
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 6.2e-15 84.3 83 54.2
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 6.2e-15 84.3 82 58.5
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 6.2e-15 84.3 74 63.5
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 2.4e-14 82.4 76 57.9
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 2.4e-14 82.4 81 60.5
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 3.1e-14 82.0 78 57.7
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 5.2e-14 81.3 72 63.9
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 5.2e-14 81.3 58 70.7
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 5.2e-14 81.3 77 57.1
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.2e-13 80.1 68 64.7
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 1.5e-13 79.7 55 70.9
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 4.4e-13 78.2 41 85.4
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 5.8e-13 77.8 72 58.3
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 5.8e-13 77.8 72 56.9
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 5.8e-13 77.8 42 85.7
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 7.6e-13 77.4 44 84.1
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 2.2e-12 75.9 80 55.0
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 2.9e-12 75.5 81 54.3
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 2.9e-12 75.5 81 54.3
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 8.4e-12 73.9 74 58.1
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.4e-11 73.2 43 79.1
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 1.9e-11 72.8 76 51.3
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 1.1e-08 63.5 39 84.6
CDE04G2580 Ceratophyllum demersum HOM05D007135 ORTHO05D008880 1.6e-07 59.7 66 50.0
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.6e-07 59.7 43 76.7
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 1.6e-07 59.7 43 76.7


User provided reference genes

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