Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0167 Trochodendron aralioides HOM05D005519 ORTHO05D006423 2.4e-77 292.4 174 100.0
Nn5g28816 Nelumbo nucifera HOM05D005519 ORTHO05D006423 2.7e-57 225.7 190 77.4
Glyma.10G222100 Glycine max HOM05D005519 ORTHO05D006423 5.3e-53 211.5 178 66.3
CiPaw.15G012900 Carya illinoinensis HOM05D005519 ORTHO05D006423 6.9e-53 211.1 178 73.6
PSO541G5828 Papaver somniferum HOM05D005519 ORTHO05D006423 1.5e-52 209.9 188 66.5
Glyma.02G079400 Glycine max HOM05D005519 ORTHO05D006423 7.7e-52 207.6 187 62.6
Glyma.20G169500 Glycine max HOM05D005519 ORTHO05D006423 1.0e-51 207.2 181 65.2
VMungo0720G0436 Vigna mungo HOM05D005519 ORTHO05D006423 5.0e-51 204.9 178 67.4
Phvul.004G091300 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 6.5e-51 204.5 184 68.5
Glyma.16G163800 Glycine max HOM05D005519 ORTHO05D006423 8.5e-51 204.1 189 63.5
MBI04_g08940_MAGBIO Magnolia biondii HOM05D005519 ORTHO05D006423 1.4e-50 203.4 177 75.7
PSO675G0400 Papaver somniferum HOM05D005519 ORTHO05D006423 2.5e-50 202.6 191 68.1
Phvul.007G083000 Phaseolus vulgaris HOM05D005519 ORTHO05D006423 1.2e-49 200.3 181 68.5
CiPaw.16G008800 Carya illinoinensis HOM05D005519 ORTHO05D006423 1.6e-49 199.9 185 69.2
Manes.02G182800 Manihot esculenta HOM05D005519 ORTHO05D006423 2.7e-49 199.1 191 69.1
Lalb_Chr03g0035541 Lupinus albus HOM05D005519 ORTHO05D006423 4.7e-49 198.4 180 63.3
Ca_10667_v3 Cicer arietinum L. HOM05D005519 ORTHO05D006423 6.1e-49 198.0 181 67.4
VMungo0464G1678 Vigna mungo HOM05D005519 ORTHO05D006423 8.0e-49 197.6 190 69.5
QL02p037831 Quercus lobata HOM05D005519 ORTHO05D006423 3.0e-48 195.7 189 66.1
Manes.18G094400 Manihot esculenta HOM05D005519 ORTHO05D006423 6.7e-48 194.5 189 67.2
Prupe.8G039900 Prunus persica HOM05D005519 ORTHO05D006423 6.7e-48 194.5 190 67.9
Lalb_Chr19g0130091 Lupinus albus HOM05D005519 ORTHO05D006423 1.1e-47 193.7 180 63.3
Cfa018287 Carpinus fangiana HOM05D005519 ORTHO05D006423 2.6e-47 192.6 197 67.0
Hma1.2p1_0358F.1_g134710 Hydrangea macrophylla HOM05D005519 ORTHO05D006423 3.3e-47 192.2 185 68.1
TWI32G0061 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 3.3e-47 192.2 182 68.1
Psat6g190880 Pisum sativum HOM05D005519 ORTHO05D006423 4.4e-47 191.8 180 61.7
Duzib116G0927 Durio zibethinus HOM05D005519 ORTHO05D006423 5.7e-47 191.4 183 62.3
Potri.005G196100 Populus trichocarpa HOM05D005519 ORTHO05D006423 1.7e-46 189.9 189 69.8
Lj2g0026694 Lotus japonicus HOM05D005519 ORTHO05D006423 2.8e-46 189.1 174 66.7
Dinv25895 Davidia involucrata HOM05D005519 ORTHO05D006423 3.7e-46 188.7 183 68.3
THA.LOC104825113 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 4.8e-46 188.3 180 63.9
QL02p038173 Quercus lobata HOM05D005519 ORTHO05D006423 1.1e-45 187.2 196 63.8
TPR.G17016 Trifolium pratense HOM05D005519 ORTHO05D006423 1.4e-45 186.8 178 62.9
RcHm_v2.0_Chr6g0274331 Rosa chinensis HOM05D005519 ORTHO05D006423 1.8e-45 186.4 186 66.7
Cpa.g.sc49.79 Carica papaya HOM05D005519 ORTHO05D006423 2.4e-45 186.0 185 68.1
MD05G1032800 Malus domestica HOM05D005519 ORTHO05D006423 3.1e-45 185.7 191 59.7
Medtr1g098280 Medicago truncatula HOM05D005519 ORTHO05D006423 4.1e-45 185.3 180 63.3
Solyc12g056620.2 Solanum lycopersicum HOM05D005519 ORTHO05D006423 4.1e-45 185.3 176 61.4
Sopen12g029280 Solanum pennellii HOM05D005519 ORTHO05D006423 4.1e-45 185.3 177 62.1
Gohir.A05G246000 Gossypium hirsutum HOM05D005519 ORTHO05D006423 5.3e-45 184.9 189 60.8
Sabra05G0149500 Salix brachista HOM05D005519 ORTHO05D006423 5.3e-45 184.9 189 66.7
THA.LOC104806763 Tarenaya hassleriana HOM05D005519 ORTHO05D006423 5.3e-45 184.9 182 67.6
DCAR_001160 Daucus carota HOM05D005519 ORTHO05D006423 7.0e-45 184.5 174 60.9
MD10G1033800 Malus domestica HOM05D005519 ORTHO05D006423 7.0e-45 184.5 191 64.9
Peaxi162Scf00160g01746 Petunia axillaris HOM05D005519 ORTHO05D006423 7.0e-45 184.5 177 64.4
PGSC0003DMG400025068 Solanum tuberosum HOM05D005519 ORTHO05D006423 9.1e-45 184.1 178 69.1
BcaB04g17909 Brassica carinata HOM05D005519 ORTHO05D006423 1.2e-44 183.7 176 65.3
Nitab4.5_0000872g0010 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.2e-44 183.7 177 64.4
Aa31LG6G8220 Aethionema arabicum HOM05D005519 ORTHO05D006423 1.6e-44 183.3 176 64.2
BolC6t36346H Brassica oleracea HOM05D005519 ORTHO05D006423 1.6e-44 183.3 177 66.1
Nitab4.5_0001103g0040 Nicotiana tabacum HOM05D005519 ORTHO05D006423 1.6e-44 183.3 177 66.1
Sopen04g027910 Solanum pennellii HOM05D005519 ORTHO05D006423 2.0e-44 183.0 182 64.8
PGSC0003DMG400018793 Solanum tuberosum HOM05D005519 ORTHO05D006423 2.0e-44 183.0 177 62.1
FvH4_2g13070 Fragaria vesca HOM05D005519 ORTHO05D006423 2.6e-44 182.6 186 66.1
Lsat_1_v5_gn_6_101660 Lactuca sativa HOM05D005519 ORTHO05D006423 2.6e-44 182.6 185 62.7
Lsat_1_v5_gn_9_42101 Lactuca sativa HOM05D005519 ORTHO05D006423 2.6e-44 182.6 175 66.3
Nitab4.5_0002812g0030 Nicotiana tabacum HOM05D005519 ORTHO05D006423 2.6e-44 182.6 177 63.8
BcaC08g43825 Brassica carinata HOM05D005519 ORTHO05D006423 3.5e-44 182.2 177 65.5
Sabra02G0051900 Salix brachista HOM05D005519 ORTHO05D006423 4.5e-44 181.8 189 64.0
CAN.G495.8 Capsicum annuum HOM05D005519 ORTHO05D006423 5.9e-44 181.4 176 64.8
Potri.002G065000 Populus trichocarpa HOM05D005519 ORTHO05D006423 7.7e-44 181.0 189 64.6
arahy.Tifrunner.gnm1.ann1.8F5AL7 Arachis hypogaea HOM05D005519 ORTHO05D006423 1.0e-43 180.6 195 60.0
ClCG08G008840 Citrullus lanatus HOM05D005519 ORTHO05D006423 1.3e-43 180.3 147 70.7
Lj7A382T71 Lonicera japonica HOM05D005519 ORTHO05D006423 1.3e-43 180.3 176 69.3
arahy.Tifrunner.gnm1.ann1.SKG6R6 Arachis hypogaea HOM05D005519 ORTHO05D006423 1.7e-43 179.9 195 59.5
Peaxi162Scf00360g00028 Petunia axillaris HOM05D005519 ORTHO05D006423 1.7e-43 179.9 176 64.2
Sed0015682 Sechium edule HOM05D005519 ORTHO05D006423 1.7e-43 179.9 147 68.0
CANSAT25G1666 Cannabis sativa HOM05D005519 ORTHO05D006423 2.2e-43 179.5 195 58.5
Thecc.08G158600 Theobroma cacao HOM05D005519 ORTHO05D006423 2.2e-43 179.5 187 65.8
Thhalv10008704m.g Eutrema salsugineum HOM05D005519 ORTHO05D006423 5.0e-43 178.3 181 69.6
Solyc04g071930.4 Solanum lycopersicum HOM05D005519 ORTHO05D006423 6.5e-43 177.9 178 64.0
Gohir.D02G068600 Gossypium hirsutum HOM05D005519 ORTHO05D006423 8.5e-43 177.6 176 69.3
Cc10_g15180 Coffea canephora HOM05D005519 ORTHO05D006423 1.5e-42 176.8 195 65.6
CsaV3_6G005050 Cucumis sativus L. HOM05D005519 ORTHO05D006423 1.5e-42 176.8 147 70.7
Haze_17800 Corylus avellana HOM05D005519 ORTHO05D006423 1.9e-42 176.4 192 65.1
ATR0580G316 Amborella trichopoda HOM05D005519 ORTHO05D006423 2.5e-42 176.0 179 65.4
Lj5g0019555 Lotus japonicus HOM05D005519 ORTHO05D006423 2.5e-42 176.0 188 59.0
PGR042G3808 Punica granatum HOM05D005519 ORTHO05D006423 2.5e-42 176.0 187 63.1
AL1G48440 Arabidopsis lyrata HOM05D005519 ORTHO05D006423 3.2e-42 175.6 181 69.1
AT1G34000 Arabidopsis thaliana HOM05D005519 ORTHO05D006423 3.2e-42 175.6 177 67.2
Nitab4.5_0000099g0170 Nicotiana tabacum HOM05D005519 ORTHO05D006423 3.2e-42 175.6 177 70.6
BraA09t38789Z Brassica rapa HOM05D005519 ORTHO05D006423 5.5e-42 174.9 178 64.0
vmacro01488 Vaccinium macrocarpon HOM05D005519 ORTHO05D006423 5.5e-42 174.9 184 60.3
MSTRG.25301 Avicennia marina HOM05D005519 ORTHO05D006423 7.2e-42 174.5 183 62.3
CAN.G26.8 Capsicum annuum HOM05D005519 ORTHO05D006423 7.2e-42 174.5 177 63.8
Duzib093G1843 Durio zibethinus HOM05D005519 ORTHO05D006423 1.2e-41 173.7 182 59.9
Migut.C00964 Erythranthe guttata HOM05D005519 ORTHO05D006423 1.2e-41 173.7 176 59.7
Gohir.D05G247500 Gossypium hirsutum HOM05D005519 ORTHO05D006423 1.6e-41 173.3 189 58.7
Rhsim11G0087200 Rhododendron simsii HOM05D005519 ORTHO05D006423 1.6e-41 173.3 190 63.7
Gorai.005G077500 Gossypium raimondii HOM05D005519 ORTHO05D006423 2.1e-41 172.9 176 68.2
Gorai.009G258300 Gossypium raimondii HOM05D005519 ORTHO05D006423 2.1e-41 172.9 189 58.7
unitig_26.g9895 Utricularia gibba HOM05D005519 ORTHO05D006423 2.1e-41 172.9 172 62.8
TWI34G0476 Tripterygium wilfordii HOM05D005519 ORTHO05D006423 3.6e-41 172.2 194 61.9
Carub.0001s3208 Capsella rubella HOM05D005519 ORTHO05D006423 4.7e-41 171.8 180 66.7
CSS0002205 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 6.1e-41 171.4 179 69.3
CDE04G2354 Ceratophyllum demersum HOM05D005519 ORTHO05D006423 1.0e-40 170.6 178 59.6
Ciclev10002625m.g Citrus clementina HOM05D005519 ORTHO05D006423 1.0e-40 170.6 183 61.7
Sc26g0002910 Simmondsia chinensis HOM05D005519 ORTHO05D006423 1.0e-40 170.6 176 56.2
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 1.4e-40 170.2 181 64.1
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 3.0e-40 169.1 136 68.4
A09p32470 Brassica napus HOM05D005519 ORTHO05D006423 5.2e-40 168.3 178 62.4
HPP92_000679 Vanilla planifolia HOM05D005519 ORTHO05D006423 5.2e-40 168.3 157 58.6
FAN27G0467 Fragaria x ananassa HOM05D005519 ORTHO05D006423 2.6e-39 166.0 172 60.5
SGA_v2.0_scaffold108G30869 Striga asiatica HOM05D005519 ORTHO05D006423 2.6e-39 166.0 137 70.1
A08p08390 Brassica napus HOM05D005519 ORTHO05D006423 9.7e-39 164.1 176 60.8
BraA08t32855Z Brassica rapa HOM05D005519 ORTHO05D006423 9.7e-39 164.1 176 60.8
BcaB07g33022 Brassica carinata HOM05D005519 ORTHO05D006423 1.3e-38 163.7 182 59.9
CARHR033380 Cardamine hirsuta HOM05D005519 ORTHO05D006423 1.7e-38 163.3 178 65.7
Lj4A703G50 Lonicera japonica HOM05D005519 ORTHO05D006423 1.7e-38 163.3 150 66.7
Nn1g06007 Nelumbo nucifera HOM05D005519 ORTHO05D006423 1.7e-38 163.3 172 69.2
C06p12090 Brassica napus HOM05D005519 ORTHO05D006423 2.8e-38 162.5 178 60.7
Zm00001eb160790 Zea mays HOM05D005519 ORTHO05D006423 2.8e-38 162.5 197 48.2
BolC8t47881H Brassica oleracea HOM05D005519 ORTHO05D006423 1.4e-37 160.2 175 58.3
Ah.05g168160 Amaranthus hybridus HOM05D005519 ORTHO05D006423 2.4e-37 159.5 182 53.8
Zm00001eb357520 Zea mays HOM05D005519 ORTHO05D006423 2.4e-37 159.5 198 49.0
Migut.N03201 Erythranthe guttata HOM05D005519 ORTHO05D006423 3.1e-37 159.1 176 57.4
GSVIVG01034578001 Vitis vinifera HOM05D005519 ORTHO05D006423 4.1e-37 158.7 84 89.3
Sed0018725 Sechium edule HOM05D005519 ORTHO05D006423 5.3e-37 158.3 146 59.6
Atru.chr13.2018 Acer truncatum HOM05D005519 ORTHO05D006423 7.0e-37 157.9 186 58.6
HanXRQChr11g0320251 Helianthus annuus HOM05D005519 ORTHO05D006423 7.0e-37 157.9 150 66.0
Sp1g29260 Schrenkiella parvula HOM05D005519 ORTHO05D006423 7.0e-37 157.9 214 56.1
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 1.0e-35 154.1 124 66.9
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 4.7e-33 145.2 98 73.5
MSTRG.1105 Avicennia marina HOM05D000084 ORTHO05D006423 1.7e-30 136.7 123 65.9
Os01g0589800 Oryza sativa ssp. japonica HOM05D005519 ORTHO05D006423 1.6e-28 130.2 70 84.3
AUR62034898 Chenopodium quinoa HOM05D005519 ORTHO05D006423 2.7e-28 129.4 75 80.0
COL.COLO4_03361 Corchorus olitorius HOM05D005519 ORTHO05D006423 5.9e-28 128.3 69 82.6
Dinv41044 Davidia involucrata HOM05D005519 ORTHO05D006423 7.2e-26 121.3 142 66.9
AagrBONN_evm.TU.Sc2ySwM_117.629 Anthoceros agrestis HOM05D005519 ORTHO05D006423 6.1e-25 118.2 144 54.2
Mapoly0065s0010 Marchantia polymorpha HOM05D005519 ORTHO05D006423 7.5e-23 111.3 82 64.6
Oeu051280.1 Olea europaea HOM05D005519 ORTHO05D006423 2.4e-21 106.3 146 52.7
Actinidia17771 Actinidia chinensis HOM05D005519 ORTHO05D006423 5.9e-20 101.7 111 54.1
SMO139G0065 Selaginella moellendorffii HOM05D005519 ORTHO05D006423 1.7e-19 100.1 157 44.6
A05p24090 Brassica napus HOM05D011378 ORTHO05D006423 5.0e-19 98.6 63 73.0
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 1.5e-18 97.1 68 70.6
CBR_g32244 Chara braunii HOM05D005519 ORTHO05D006423 2.5e-18 96.3 80 57.5
Cre06.g251150 Chlamydomonas reinhardtii HOM05D005519 ORTHO05D006423 9.5e-18 94.4 90 51.1
Hund30143 Selenicereus undatus HOM05D005519 ORTHO05D006423 1.2e-17 94.0 169 48.5
MELO3C029825.2 Cucumis melo HOM05D005519 ORTHO05D006423 6.1e-17 91.7 116 56.9
MCO05G699 Micromonas commoda HOM05D005519 ORTHO05D006423 8.0e-17 91.3 92 45.7
CSS0025090 Camellia sinensis var. sinensis HOM05D005519 ORTHO05D006423 3.4e-15 85.9 142 58.5
Eucgr.L00901 Eucalyptus grandis HOM05D005519 ORTHO05D006423 5.8e-15 85.1 142 50.0
PRCOL_00003386 Prasinoderma coloniale HOM05D005519 ORTHO05D006423 2.8e-09 66.2 67 49.3
Pp3c1_8300 Physcomitrium patens HOM05D005519 ORTHO05D006423 8.9e-08 61.2 39 66.7


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