Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR381G0014 Trochodendron aralioides HOM05D002370 ORTHO05D414920 3.4e-132 474.9 230 100.0
TAR381G0773 Trochodendron aralioides HOM05D002370 ORTHO05D003878 3.3e-26 122.9 226 43.8
PSO541G1630 Papaver somniferum HOM05D002370 ORTHO05D003878 3.6e-25 119.4 230 41.3
Nn5g30713 Nelumbo nucifera HOM05D002370 ORTHO05D003878 4.0e-24 115.9 222 40.5
DCAR_003604 Daucus carota HOM05D002370 ORTHO05D003878 6.9e-24 115.2 228 40.8
Thecc.02G120900 Theobroma cacao HOM05D002370 ORTHO05D003878 6.9e-24 115.2 225 41.8
COL.COLO4_32473 Corchorus olitorius HOM05D002370 ORTHO05D003878 9.0e-24 114.8 219 44.3
PSO675G3080 Papaver somniferum HOM05D002370 ORTHO05D003878 1.2e-23 114.4 232 42.2
PGR142G4285 Punica granatum HOM05D002370 ORTHO05D003878 1.2e-23 114.4 231 38.5
Lj5C222G6 Lonicera japonica HOM05D002370 ORTHO05D003878 1.5e-23 114.0 230 41.7
PSO675G4735 Papaver somniferum HOM05D002370 ORTHO05D003878 2.0e-23 113.6 226 40.7
Aqoxy6G01518 Aquilegia oxysepala HOM05D002370 ORTHO05D003878 3.4e-23 112.8 226 41.2
Gohir.A12G018200 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.4e-23 112.8 228 42.5
PSO732G0082 Papaver somniferum HOM05D002370 ORTHO05D003878 3.4e-23 112.8 229 43.2
Potri.009G084500 Populus trichocarpa HOM05D002370 ORTHO05D003878 3.4e-23 112.8 229 41.9
ECA232G2594 Erigeron canadensis HOM05D002370 ORTHO05D003878 4.4e-23 112.5 226 38.5
Gohir.D12G018800 Gossypium hirsutum HOM05D002370 ORTHO05D003878 5.8e-23 112.1 228 42.1
Gorai.008G019100 Gossypium raimondii HOM05D002370 ORTHO05D003878 5.8e-23 112.1 228 42.1
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 5.8e-23 112.1 229 38.9
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 7.6e-23 111.7 229 38.9
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 1.3e-22 110.9 231 41.6
TWI59G1328 Tripterygium wilfordii HOM05D002370 ORTHO05D003878 1.3e-22 110.9 225 39.1
Potri.001G289200 Populus trichocarpa HOM05D002370 ORTHO05D003878 2.2e-22 110.2 231 41.1
PGSC0003DMG401025733 Solanum tuberosum HOM05D002370 ORTHO05D003878 2.2e-22 110.2 225 40.9
CDE06G0012 Ceratophyllum demersum HOM05D002370 ORTHO05D003878 2.9e-22 109.8 227 39.6
Nitab4.5_0000772g0070 Nicotiana tabacum HOM05D002370 ORTHO05D003878 2.9e-22 109.8 226 39.8
MD10G1112000 Malus domestica HOM05D002370 ORTHO05D003878 3.8e-22 109.4 226 40.3
Solyc01g106770.4 Solanum lycopersicum HOM05D002370 ORTHO05D003878 3.8e-22 109.4 225 40.4
Sopen01g049080 Solanum pennellii HOM05D002370 ORTHO05D003878 3.8e-22 109.4 225 40.4
AUR62030874 Chenopodium quinoa HOM05D002370 ORTHO05D003878 4.9e-22 109.0 226 39.4
ClCG02G007160 Citrullus lanatus HOM05D002370 ORTHO05D003878 4.9e-22 109.0 228 39.9
CiPaw.05G021600 Carya illinoinensis HOM05D002370 ORTHO05D003878 6.4e-22 108.6 223 38.6
TAR625G0605 Trochodendron aralioides HOM05D002370 ORTHO05D003878 6.4e-22 108.6 225 40.4
CiPaw.06G163300 Carya illinoinensis HOM05D002370 ORTHO05D003878 8.4e-22 108.2 228 41.2
AUR62027030 Chenopodium quinoa HOM05D002370 ORTHO05D003878 8.4e-22 108.2 226 38.9
Gohir.D01G009100 Gossypium hirsutum HOM05D002370 ORTHO05D003878 8.4e-22 108.2 222 39.2
Gorai.002G011200 Gossypium raimondii HOM05D002370 ORTHO05D003878 8.4e-22 108.2 222 39.2
Hma1.2p1_1051F.1_g252210 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 8.4e-22 108.2 230 39.6
MD05G1107800 Malus domestica HOM05D002370 ORTHO05D003878 8.4e-22 108.2 224 39.7
VMungo1215G1081 Vigna mungo HOM05D002370 ORTHO05D003878 8.4e-22 108.2 227 38.3
Peaxi162Scf00016g03243 Petunia axillaris HOM05D002370 ORTHO05D003878 1.1e-21 107.8 228 39.0
GSVIVG01037040001 Vitis vinifera HOM05D002370 ORTHO05D003878 1.1e-21 107.8 224 39.7
MELO3C018533.2 Cucumis melo HOM05D002370 ORTHO05D003878 1.4e-21 107.5 224 38.4
Dinv09531 Davidia involucrata HOM05D002370 ORTHO05D003878 1.4e-21 107.5 225 38.2
Lj1g0008728 Lotus japonicus HOM05D002370 ORTHO05D003878 1.4e-21 107.5 227 38.8
Sed0018886 Sechium edule HOM05D002370 ORTHO05D003878 1.4e-21 107.5 227 37.9
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea HOM05D002370 ORTHO05D003878 1.9e-21 107.1 229 36.7
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea HOM05D002370 ORTHO05D003878 1.9e-21 107.1 229 36.7
DCAR_021938 Daucus carota HOM05D002370 ORTHO05D003878 1.9e-21 107.1 228 39.5
Nitab4.5_0010974g0020 Nicotiana tabacum HOM05D002370 ORTHO05D003878 1.9e-21 107.1 226 39.8
SalBow6G1889 Salvia bowleyana HOM05D002370 ORTHO05D003878 1.9e-21 107.1 229 36.7
EL10Ac9g22169 Beta vulgaris HOM05D002370 ORTHO05D003878 2.4e-21 106.7 226 40.7
CAN.G606.78 Capsicum annuum HOM05D002370 ORTHO05D003878 2.4e-21 106.7 229 40.2
Hma1.2p1_0661F.1_g197980 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 2.4e-21 106.7 228 40.8
Hma1.2p1_1758F.1_g301190 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 2.4e-21 106.7 228 40.8
Rhsim11G0149700 Rhododendron simsii HOM05D002370 ORTHO05D003878 2.4e-21 106.7 217 37.8
THA.LOC104826500 Tarenaya hassleriana HOM05D002370 ORTHO05D003878 3.2e-21 106.3 225 38.7
Atru.chr4.144 Acer truncatum HOM05D002370 ORTHO05D003878 4.2e-21 105.9 227 37.9
Atru.chr4.155 Acer truncatum HOM05D002370 ORTHO05D003878 4.2e-21 105.9 227 37.9
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 4.2e-21 105.9 225 38.7
CsaV3_7G007670 Cucumis sativus L. HOM05D002370 ORTHO05D003878 4.2e-21 105.9 229 37.6
Glyma.01G241300 Glycine max HOM05D002370 ORTHO05D003878 4.2e-21 105.9 227 38.8
Glyma.11G002600 Glycine max HOM05D002370 ORTHO05D003878 4.2e-21 105.9 227 38.3
Sp1g36890 Schrenkiella parvula HOM05D002370 ORTHO05D003878 4.2e-21 105.9 225 40.4
CSS0028039 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 5.4e-21 105.5 226 37.2
Oeu028915.2 Olea europaea HOM05D002370 ORTHO05D003878 5.4e-21 105.5 232 39.2
Prupe.8G151300 Prunus persica HOM05D002370 ORTHO05D003878 7.1e-21 105.1 226 36.3
A05p20360 Brassica napus HOM05D002370 ORTHO05D003878 9.3e-21 104.8 227 39.2
C05p34110 Brassica napus HOM05D002370 ORTHO05D003878 9.3e-21 104.8 229 36.2
BraA05t20943Z Brassica rapa HOM05D002370 ORTHO05D003878 9.3e-21 104.8 227 39.2
Duzib132G1084 Durio zibethinus HOM05D002370 ORTHO05D003878 9.3e-21 104.8 228 40.8
unitig_60.g25464 Utricularia gibba HOM05D002370 ORTHO05D003878 9.3e-21 104.8 226 35.8
Haze_10320 Corylus avellana HOM05D002370 ORTHO05D003878 1.2e-20 104.4 226 38.1
Thhalv10011174m.g Eutrema salsugineum HOM05D002370 ORTHO05D003878 1.2e-20 104.4 222 37.4
AL1G57600 Arabidopsis lyrata HOM05D002370 ORTHO05D003878 1.6e-20 104.0 227 37.9
Phvul.002G049900 Phaseolus vulgaris HOM05D002370 ORTHO05D003878 1.6e-20 104.0 227 37.9
Sabra09G0065200 Salix brachista HOM05D002370 ORTHO05D003878 2.1e-20 103.6 229 40.2
HPP92_016412 Vanilla planifolia HOM05D002370 ORTHO05D003878 2.1e-20 103.6 228 37.3
Ciclev10027661m.g Citrus clementina HOM05D002370 ORTHO05D003878 3.5e-20 102.8 229 38.0
BcaC05g27452 Brassica carinata HOM05D002370 ORTHO05D003878 4.6e-20 102.4 227 38.8
BolC5t32146H Brassica oleracea HOM05D002370 ORTHO05D003878 4.6e-20 102.4 227 38.8
Migut.B00477 Erythranthe guttata HOM05D002370 ORTHO05D003878 6.0e-20 102.1 231 36.4
Actinidia02446 Actinidia chinensis HOM05D002370 ORTHO05D003878 7.8e-20 101.7 227 35.7
AT1G50030 Arabidopsis thaliana HOM05D002370 ORTHO05D003878 7.8e-20 101.7 227 37.4
ATR0753G079 Amborella trichopoda HOM05D002370 ORTHO05D003878 1.0e-19 101.3 227 38.3
CSS0026275 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 1.0e-19 101.3 222 37.8
Lalb_Chr16g0376321 Lupinus albus HOM05D002370 ORTHO05D003878 1.0e-19 101.3 233 37.8
vmacro01937 Vaccinium macrocarpon HOM05D002370 ORTHO05D003878 1.0e-19 101.3 226 35.8
Carub.0001s3921 Capsella rubella HOM05D002370 ORTHO05D003878 1.3e-19 100.9 227 36.6
CAN.G1164.4 Capsicum annuum HOM05D002370 ORTHO05D003878 1.3e-19 100.9 224 38.4
CARHR040140 Cardamine hirsuta HOM05D002370 ORTHO05D003878 2.3e-19 100.1 227 38.3
Lalb_Chr05g0210831 Lupinus albus HOM05D002370 ORTHO05D003878 2.3e-19 100.1 233 37.3
MSTRG.16667 Avicennia marina HOM05D002370 ORTHO05D003878 3.0e-19 99.8 228 36.8
CAN.G1627.7 Capsicum annuum HOM05D002370 ORTHO05D003878 3.9e-19 99.4 230 37.0
Manes.07G052660 Manihot esculenta HOM05D002370 ORTHO05D003878 5.1e-19 99.0 227 38.3
Oeu025303.1 Olea europaea HOM05D002370 ORTHO05D003878 5.1e-19 99.0 227 38.8
Sc18g0007320 Simmondsia chinensis HOM05D002370 ORTHO05D003878 1.1e-18 97.8 219 38.4
BcaB02g11126 Brassica carinata HOM05D002370 ORTHO05D003878 1.5e-18 97.4 225 36.9
C06p04900 Brassica napus HOM05D002370 ORTHO05D003878 1.5e-18 97.4 227 36.1
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 2.5e-18 96.7 212 37.7
A06p03390 Brassica napus HOM05D002370 ORTHO05D003878 3.3e-18 96.3 227 35.7
BolC6t35612H Brassica oleracea HOM05D002370 ORTHO05D003878 3.3e-18 96.3 227 35.7
BraA06t23548Z Brassica rapa HOM05D002370 ORTHO05D003878 3.3e-18 96.3 227 35.7
BcaB07g33455 Brassica carinata HOM05D002370 ORTHO05D003878 4.3e-18 95.9 222 35.1
BcaC08g43183 Brassica carinata HOM05D002370 ORTHO05D003878 5.6e-18 95.5 227 35.7
HanXRQChr04g0107251 Helianthus annuus HOM05D002370 ORTHO05D003878 7.3e-18 95.1 215 38.6
HanXRQChr04g0107281 Helianthus annuus HOM05D002370 ORTHO05D003878 9.6e-18 94.7 216 37.0
Ca_24363_v3 Cicer arietinum L. HOM05D002370 ORTHO05D003878 2.1e-17 93.6 232 36.2
TPR.G8301 Trifolium pratense HOM05D002370 ORTHO05D003878 8.1e-17 91.7 226 35.4
Lsat_1_v5_gn_4_143680 Lactuca sativa HOM05D002370 ORTHO05D003878 1.4e-16 90.9 214 36.9
Medtr5g005380 Medicago truncatula HOM05D002370 ORTHO05D003878 1.4e-16 90.9 232 37.5
Os05g0235300 Oryza sativa ssp. japonica HOM05D002370 ORTHO05D003878 1.4e-16 90.9 219 36.5
Psat4g229000 Pisum sativum HOM05D002370 ORTHO05D003878 5.3e-16 89.0 233 36.9
Eucgr.I02503 Eucalyptus grandis HOM05D002370 ORTHO05D003878 9.0e-16 88.2 232 34.9
Cc02_g20160 Coffea canephora HOM05D002370 ORTHO05D003878 2.6e-15 86.7 207 35.3
MD00G1031100 Malus domestica HOM05D002370 ORTHO05D003878 2.6e-15 86.7 48 87.5
CAN.G411.96 Capsicum annuum HOM05D002370 ORTHO05D003878 7.6e-15 85.1 235 34.9
FAN20G2522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 9.9e-15 84.7 230 34.8
Zm00001eb285840 Zea mays HOM05D002370 ORTHO05D003878 9.9e-15 84.7 209 36.4
RcHm_v2.0_Chr6g0247951 Rosa chinensis HOM05D002370 ORTHO05D003878 1.3e-14 84.3 230 34.8
FvH4_2g03080 Fragaria vesca HOM05D002370 ORTHO05D003878 3.8e-14 82.8 230 34.3
FAN15G3522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 3.8e-14 82.8 230 34.3
FAN24G1227 Fragaria x ananassa HOM05D002370 ORTHO05D003878 3.8e-14 82.8 230 34.3
FAN27G1380 Fragaria x ananassa HOM05D002370 ORTHO05D003878 3.8e-14 82.8 230 34.3
Mapoly0047s0119 Marchantia polymorpha HOM05D002370 ORTHO05D003878 8.4e-14 81.6 230 33.5
CAN.G289.58 Capsicum annuum HOM05D002370 ORTHO05D003878 1.9e-13 80.5 210 36.2
CAN.G411.107 Capsicum annuum HOM05D002370 ORTHO05D003878 2.1e-12 77.0 50 74.0
SGA_v2.0_scaffold519G52682 Striga asiatica HOM05D002370 ORTHO05D003878 2.1e-12 77.0 48 77.1
SHI03324 Sapria himalayana HOM05D002370 ORTHO05D003878 4.6e-12 75.9 48 77.1
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis HOM05D002370 ORTHO05D003878 6.0e-12 75.5 223 33.2
CAN.G1164.1 Capsicum annuum HOM05D002370 ORTHO05D003878 1.0e-11 74.7 227 34.4
CAN.G411.104 Capsicum annuum HOM05D002370 ORTHO05D003878 2.3e-11 73.6 225 34.7
SGA_v2.0_scaffold32G12979 Striga asiatica HOM05D002370 ORTHO05D003878 3.0e-11 73.2 48 72.9
Pp3c6_4910 Physcomitrium patens HOM05D002370 ORTHO05D003878 3.9e-11 72.8 226 31.4
CAN.G1627.3 Capsicum annuum HOM05D002370 ORTHO05D003878 8.7e-11 71.6 215 32.6
SMO147G0225 Selaginella moellendorffii HOM05D002370 ORTHO05D003878 4.5e-07 59.3 220 30.9


User provided reference genes

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