Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G1120 Trochodendron aralioides HOM05D006685 ORTHO05D008244 0.0e+00 1466.8 730 100.0
Dinv26751 Davidia involucrata HOM05D006685 ORTHO05D008244 1.9e-192 676.8 726 51.8
Aqoxy6G00915 Aquilegia oxysepala HOM05D006685 ORTHO05D008244 4.6e-191 672.2 719 53.0
Cfa004216 Carpinus fangiana HOM05D006685 ORTHO05D008244 6.5e-185 651.7 728 50.4
Atru.chr3.446 Acer truncatum HOM05D006685 ORTHO05D008244 1.1e-184 651.0 730 49.9
QL06p043714 Quercus lobata HOM05D006685 ORTHO05D008244 1.4e-184 650.6 730 48.8
Nn5g29383 Nelumbo nucifera HOM05D006685 ORTHO05D008244 1.0e-177 627.9 600 56.8
RcHm_v2.0_Chr2g0103811 Rosa chinensis HOM05D006685 ORTHO05D008244 1.9e-176 623.6 718 48.3
FAN28G0684 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.2e-175 620.9 719 48.3
Manes.13G130000 Manihot esculenta HOM05D006685 ORTHO05D008244 1.7e-172 610.5 719 48.5
FvH4_1g14850 Fragaria vesca HOM05D006685 ORTHO05D008244 2.2e-172 610.1 719 48.0
MBI16_g19900_MAGBIO Magnolia biondii HOM05D006685 ORTHO05D008244 1.1e-171 607.8 736 49.3
Hma1.2p1_0546F.1_g176210 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 6.9e-171 605.1 645 51.8
FAN28G1646 Fragaria x ananassa HOM05D006685 ORTHO05D008244 2.0e-170 603.6 704 48.7
FAN26G3106 Fragaria x ananassa HOM05D006685 ORTHO05D008244 4.5e-170 602.4 749 46.5
FAN23G0082 Fragaria x ananassa HOM05D006685 ORTHO05D008244 3.2e-168 596.3 708 48.3
Duzib187G0300 Durio zibethinus HOM05D006685 ORTHO05D008244 1.8e-166 590.5 713 47.4
Actinidia36520 Actinidia chinensis HOM05D006685 ORTHO05D008244 2.8e-164 583.2 733 47.6
PSO541G3044 Papaver somniferum HOM05D006685 ORTHO05D008244 2.8e-164 583.2 722 47.2
Thecc.01G048300 Theobroma cacao HOM05D006685 ORTHO05D008244 4.8e-164 582.4 712 46.9
CSS0018173 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 2.4e-163 580.1 717 47.0
Potri.005G133500 Populus trichocarpa HOM05D006685 ORTHO05D008244 1.5e-162 577.4 722 46.4
RcHm_v2.0_Chr1g0329901 Rosa chinensis HOM05D006685 ORTHO05D008244 2.9e-161 573.2 724 46.0
CiPaw.02G011900 Carya illinoinensis HOM05D006685 ORTHO05D008244 3.6e-159 566.2 726 45.0
MD15G1276100 Malus domestica HOM05D006685 ORTHO05D008244 3.9e-158 562.8 745 45.2
Sabra05G0107200 Salix brachista HOM05D006685 ORTHO05D008244 1.2e-154 551.2 714 45.4
Prupe.7G141900 Prunus persica HOM05D006685 ORTHO05D008244 8.5e-153 545.0 718 45.1
CANSAT01G2373 Cannabis sativa HOM05D006685 ORTHO05D008244 6.1e-151 538.9 730 44.0
Gohir.A12G068800 Gossypium hirsutum HOM05D006685 ORTHO05D008244 5.2e-150 535.8 713 45.3
Gorai.008G072600 Gossypium raimondii HOM05D006685 ORTHO05D008244 2.0e-146 523.9 713 44.5
Gohir.D12G090400 Gossypium hirsutum HOM05D006685 ORTHO05D008244 1.7e-145 520.8 712 44.2
Lj7A20T60 Lonicera japonica HOM05D006685 ORTHO05D008244 1.7e-145 520.8 638 45.6
COL.COLO4_11329 Corchorus olitorius HOM05D006685 ORTHO05D008244 5.5e-144 515.8 715 43.6
Phvul.003G248400 Phaseolus vulgaris HOM05D006685 ORTHO05D008244 1.5e-141 507.7 732 40.6
Medtr8g079100 Medicago truncatula HOM05D006685 ORTHO05D008244 2.2e-140 503.8 721 40.9
TPR.G30340 Trifolium pratense HOM05D006685 ORTHO05D008244 2.4e-139 500.4 721 41.9
VMungo0251G1647 Vigna mungo HOM05D006685 ORTHO05D008244 9.1e-139 498.4 713 41.5
Glyma.02G062800 Glycine max HOM05D006685 ORTHO05D008244 7.7e-138 495.4 731 41.3
Psat4g089520 Pisum sativum HOM05D006685 ORTHO05D008244 1.7e-137 494.2 712 41.4
Hma1.2p1_0546F.1_g176200 Hydrangea macrophylla HOM05D006685 ORTHO05D008244 9.5e-136 488.4 597 48.1
vmacro05297 Vaccinium macrocarpon HOM05D006685 ORTHO05D008244 1.6e-135 487.6 701 44.2
Lj4g0023849 Lotus japonicus HOM05D006685 ORTHO05D008244 2.0e-133 480.7 716 39.8
Sc03g0001280 Simmondsia chinensis HOM05D006685 ORTHO05D008244 2.6e-133 480.3 719 41.0
Lalb_Chr16g0388451 Lupinus albus HOM05D006685 ORTHO05D008244 4.4e-133 479.6 709 41.0
Ciclev10025347m.g Citrus clementina HOM05D006685 ORTHO05D008244 1.4e-131 474.6 570 47.5
Hund16306 Selenicereus undatus HOM05D006685 ORTHO05D008244 1.7e-129 467.6 712 40.3
Sed0001332 Sechium edule HOM05D006685 ORTHO05D008244 3.3e-128 463.4 728 40.5
ClCG02G012840 Citrullus lanatus HOM05D006685 ORTHO05D008244 1.8e-126 457.6 740 40.1
CsaV3_2G016900 Cucumis sativus L. HOM05D006685 ORTHO05D008244 1.7e-124 451.1 716 40.5
Cc07_g05580 Coffea canephora HOM05D006685 ORTHO05D008244 6.4e-124 449.1 731 40.4
Aa31LG4G18660 Aethionema arabicum HOM05D006685 ORTHO05D008244 1.4e-123 448.0 728 39.1
DCAR_025691 Daucus carota HOM05D006685 ORTHO05D008244 1.9e-123 447.6 712 39.5
AT3G50430 Arabidopsis thaliana HOM05D006685 ORTHO05D008244 2.3e-121 440.7 730 39.0
Sp5g11730 Schrenkiella parvula HOM05D006685 ORTHO05D008244 4.7e-119 433.0 725 38.5
ATR0733G107 Amborella trichopoda HOM05D006685 ORTHO05D008244 1.4e-118 431.4 735 38.5
Nitab4.5_0001014g0040 Nicotiana tabacum HOM05D006685 ORTHO05D008244 1.8e-118 431.0 710 39.2
CARHR159940 Cardamine hirsuta HOM05D006685 ORTHO05D008244 4.0e-118 429.9 724 38.0
Lj7A17G42 Lonicera japonica HOM05D006685 ORTHO05D008244 1.2e-117 428.3 586 43.0
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 3.5e-114 416.8 686 38.2
Thhalv10010194m.g Eutrema salsugineum HOM05D006685 ORTHO05D008244 6.0e-114 416.0 727 38.1
PGSC0003DMG402010073 Solanum tuberosum HOM05D006685 ORTHO05D008244 6.0e-114 416.0 715 38.3
AL5G30586 Arabidopsis lyrata HOM05D006685 ORTHO05D008244 7.8e-114 415.6 732 37.2
PGR119G2375 Punica granatum HOM05D006685 ORTHO05D008244 2.3e-113 414.1 731 37.1
Sopen02g034940 Solanum pennellii HOM05D006685 ORTHO05D008244 8.6e-113 412.1 720 36.8
Nitab4.5_0000108g0340 Nicotiana tabacum HOM05D006685 ORTHO05D008244 7.3e-112 409.1 727 38.4
Migut.H00483 Erythranthe guttata HOM05D006685 ORTHO05D008244 1.2e-111 408.3 718 36.2
Eucgr.I01015 Eucalyptus grandis HOM05D006685 ORTHO05D008244 8.1e-111 405.6 631 40.3
CAN.G836.36 Capsicum annuum HOM05D006685 ORTHO05D008244 8.9e-110 402.1 707 37.2
BcaB05g23218 Brassica carinata HOM05D006685 ORTHO05D008244 7.5e-109 399.1 719 37.1
BolC1t02922H Brassica oleracea HOM05D006685 ORTHO05D008244 4.9e-108 396.4 717 37.0
MELO3C020890.2 Cucumis melo HOM05D006685 ORTHO05D008244 1.6e-106 391.3 772 36.5
THA.LOC104821263 Tarenaya hassleriana HOM05D006685 ORTHO05D008244 2.1e-106 391.0 649 38.2
C01p29820 Brassica napus HOM05D006685 ORTHO05D008244 1.3e-105 388.3 708 36.9
BraA01t02325Z Brassica rapa HOM05D006685 ORTHO05D008244 5.1e-105 386.3 714 35.9
Solyc02g090260.3 Solanum lycopersicum HOM05D006685 ORTHO05D008244 8.6e-105 385.6 720 35.4
Haze_15195 Corylus avellana HOM05D006685 ORTHO05D008244 4.3e-104 383.3 741 37.0
HanXRQChr12g0378291 Helianthus annuus HOM05D006685 ORTHO05D008244 1.6e-103 381.3 714 36.7
Peaxi162Scf00993g00018 Petunia axillaris HOM05D006685 ORTHO05D008244 1.4e-102 378.3 638 38.1
A01p24130 Brassica napus HOM05D006685 ORTHO05D008244 1.8e-102 377.9 699 36.3
Ca_22212_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 7.6e-101 372.5 712 35.0
SGA_v2.0_scaffold204G41611 Striga asiatica HOM05D006685 ORTHO05D008244 1.0e-97 362.1 691 34.7
Ca_22230_v3 Cicer arietinum L. HOM05D006685 ORTHO05D008244 5.1e-97 359.8 701 34.7
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 3.3e-96 357.1 584 38.7
Os07g0120700 Oryza sativa ssp. japonica HOM05D006685 ORTHO05D008244 9.0e-94 349.0 723 36.4
Carub.0005s1677 Capsella rubella HOM05D006685 ORTHO05D008244 4.9e-92 343.2 511 39.7
Lsat_1_v5_gn_3_92360 Lactuca sativa HOM05D006685 ORTHO05D008244 1.2e-90 338.6 721 34.1
BcaC09g50030 Brassica carinata HOM05D006685 ORTHO05D008244 9.6e-88 328.9 600 36.5
Zm00001eb209650 Zea mays HOM05D006685 ORTHO05D008244 6.2e-87 326.2 741 34.7
Zm00001eb209640 Zea mays HOM05D006685 ORTHO05D008244 3.1e-86 323.9 741 34.5
ECA246G1174 Erigeron canadensis HOM05D006685 ORTHO05D008244 1.2e-85 322.0 724 34.0
HPP92_017771 Vanilla planifolia HOM05D006685 ORTHO05D008244 3.8e-84 317.0 701 33.2
AUR62001974 Chenopodium quinoa HOM05D006685 ORTHO05D008244 9.3e-83 312.4 729 32.4
Cpa.g.sc76.25 Carica papaya HOM05D006685 ORTHO05D008244 2.3e-81 307.8 448 41.5
PGR044G2727 Punica granatum HOM05D006685 ORTHO05D008244 4.8e-79 300.1 449 41.2
AUR62003829 Chenopodium quinoa HOM05D006685 ORTHO05D008244 1.5e-77 295.0 442 41.4
CSS0022206 Camellia sinensis var. sinensis HOM05D006685 ORTHO05D008244 6.7e-73 279.6 350 46.6
Oeu003945.1 Olea europaea HOM05D006685 ORTHO05D008244 2.5e-72 277.7 372 43.0
MD06G1092200 Malus domestica HOM05D006685 ORTHO05D008244 2.8e-63 247.7 325 45.2
arahy.Tifrunner.gnm1.ann1.5EE2XW Arachis hypogaea HOM05D006685 ORTHO05D008244 3.7e-63 247.3 431 37.4
unitig_749.g14219 Utricularia gibba HOM05D006685 ORTHO05D008244 1.3e-52 212.2 407 39.8
FAN28G0437 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.8e-49 199.5 196 56.1
CDE07G0460 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.0e-48 198.4 382 36.6
GSVIVG01036190001 Vitis vinifera HOM05D006685 ORTHO05D008244 5.3e-30 137.1 162 50.0
GSVIVG01002723001 Vitis vinifera HOM05D006685 ORTHO05D008244 2.2e-28 131.7 162 46.3
ATR0733G174 Amborella trichopoda HOM05D006685 ORTHO05D008244 8.5e-28 129.8 142 50.0
CDE07G1850 Ceratophyllum demersum HOM05D006685 ORTHO05D008244 2.7e-26 124.8 283 35.0
Prupe.5G239300 Prunus persica HOM05D006685 ORTHO05D008244 6.6e-20 103.6 97 58.8
Mapoly0122s0032 Marchantia polymorpha HOM05D006685 ORTHO05D008244 7.2e-19 100.1 561 26.0
SEGI_02281 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 1.2e-18 99.4 422 28.0
Pp3c3_30590 Physcomitrium patens HOM05D006685 ORTHO05D008244 1.4e-17 95.9 437 26.5
unitig_78.g29629 Utricularia gibba HOM05D006685 ORTHO05D008244 4.0e-17 94.4 293 29.7
FAN05G3710 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.3e-15 86.7 63 65.1
FAN08G2647 Fragaria x ananassa HOM05D006685 ORTHO05D008244 8.3e-15 86.7 63 65.1
FAN28G0452 Fragaria x ananassa HOM05D006685 ORTHO05D008244 1.2e-10 72.8 58 63.8
MD06G1092300 Malus domestica HOM05D006685 ORTHO05D008244 1.0e-09 69.7 73 43.8
SEGI_35306 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 5.8e-08 63.9 117 34.2
SEGI_38886 Sequoiadendron giganteum HOM05D006685 ORTHO05D008244 8.3e-07 60.1 168 32.1
AagrBONN_evm.TU.Sc2ySwM_228.383 Anthoceros agrestis HOM05D039764 ORTHO05D031174 2.4e-06 58.5 282 25.5
CBR_g36358 Chara braunii HOM05D005614 ORTHO05D006759 4.1e-06 57.8 87 37.9


User provided reference genes

Program Settings