Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 2.6e-272 941.4 468 100.0
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 5.5e-137 491.9 281 84.7
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 7.9e-136 488.0 283 83.7
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 2.2e-133 479.9 283 81.3
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 7.7e-131 471.5 281 79.4
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 1.4e-129 467.2 283 80.2
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 4.2e-129 465.7 282 80.1
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 4.2e-129 465.7 372 64.2
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 3.6e-128 462.6 285 78.6
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 6.1e-128 461.8 282 78.4
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 1.4e-127 460.7 283 78.8
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 2.3e-127 459.9 304 75.0
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 1.5e-126 457.2 282 76.2
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 1.5e-126 457.2 282 77.0
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 2.0e-126 456.8 288 77.1
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 1.3e-125 454.1 282 74.5
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 4.8e-125 452.2 283 73.9
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 9.1e-124 448.0 282 73.0
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.2e-123 447.6 283 73.9
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 1.5e-123 447.2 282 75.2
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 2.6e-123 446.4 282 74.1
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 5.9e-123 445.3 284 77.1
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 2.9e-122 443.0 310 68.1
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 3.8e-122 442.6 283 76.0
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.5e-121 440.7 283 75.3
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.2e-120 437.6 283 73.9
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 1.6e-120 437.2 283 73.5
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 2.1e-120 436.8 281 74.4
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 8.0e-120 434.9 283 73.9
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 5.2e-119 432.2 280 74.3
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 1.1e-118 431.0 280 75.4
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 5.7e-118 428.7 283 72.8
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 5.7e-118 428.7 282 73.0
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 2.8e-117 426.4 282 72.0
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 4.8e-117 425.6 277 74.4
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 2.4e-116 423.3 282 72.7
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.6e-115 420.6 283 70.0
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 2.6e-115 419.9 282 72.0
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 7.7e-115 418.3 281 70.8
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 8.5e-114 414.8 282 70.6
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 4.2e-113 412.5 282 69.1
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 1.6e-112 410.6 285 70.2
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 3.6e-112 409.5 291 68.7
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.6e-112 409.5 273 73.6
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 4.7e-112 409.1 283 67.1
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 4.7e-112 409.1 282 67.7
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 6.1e-112 408.7 283 70.3
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 1.0e-111 407.9 268 73.1
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 4.0e-111 406.0 282 68.1
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 1.2e-110 404.4 282 68.8
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 2.6e-110 403.3 282 67.0
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 4.4e-110 402.5 282 67.7
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.3e-109 401.0 288 69.8
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 2.2e-109 400.2 282 67.7
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 3.7e-109 399.4 282 67.4
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 3.7e-109 399.4 282 66.7
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 8.3e-109 398.3 282 67.4
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 1.4e-108 397.5 282 67.0
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 1.8e-108 397.1 282 67.0
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 2.9e-106 389.8 271 69.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 3.8e-106 389.4 308 62.3
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 7.2e-105 385.2 274 67.5
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 7.2e-105 385.2 278 66.5
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.2e-104 384.4 286 68.2
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 2.7e-104 383.3 337 59.6
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 3.0e-103 379.8 274 66.1
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 5.2e-103 379.0 274 66.4
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.2e-102 377.9 282 67.4
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 2.4e-100 370.2 282 63.5
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 5.4e-100 369.0 229 78.6
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 5.4e-100 369.0 281 61.9
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 2.3e-98 363.6 235 74.0
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.1e-97 361.3 279 59.5
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 2.1e-96 357.1 268 67.5
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 2.8e-96 356.7 283 63.3
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 7.8e-91 338.6 203 80.8
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 7.8e-91 338.6 307 56.0
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 5.0e-90 335.9 283 63.3
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 9.5e-89 331.6 205 75.6
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 1.5e-86 324.3 212 75.5
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 6.2e-80 302.4 206 71.4
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 1.8e-79 300.8 270 61.1
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 4.0e-79 299.7 205 68.8
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 5.2e-79 299.3 210 68.1
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 1.0e-74 285.0 316 52.2
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.2e-72 278.1 261 47.1
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 1.6e-72 277.7 244 59.4
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 1.7e-69 267.7 240 59.6
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 2.7e-59 233.8 288 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 2.3e-58 230.7 274 44.5
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 1.5e-57 228.0 291 45.4
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 1.3e-56 224.9 184 65.8
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.6e-56 223.4 159 69.2
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 2.4e-52 210.7 125 79.2
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 3.6e-48 196.8 211 45.5
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 8.4e-45 185.7 126 66.7
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 5.1e-42 176.4 110 79.1
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 4.5e-38 163.3 97 77.3
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 4.5e-38 163.3 124 64.5
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 6.5e-37 159.5 295 32.5
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 3.5e-35 153.7 90 78.9
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 3.4e-30 137.1 78 79.5
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 7.6e-30 136.0 80 80.0
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 3.8e-29 133.7 78 76.9
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 6.5e-29 132.9 78 71.8
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 1.0e-26 125.6 89 73.0
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 3.0e-26 124.0 89 71.9
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 1.8e-23 114.8 162 35.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 7.7e-22 109.4 287 27.5
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 5.5e-20 103.2 65 70.8
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 2.7e-19 100.9 79 67.1
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 1.4e-15 88.6 45 77.8
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 1.2e-11 75.5 135 38.5
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 3.9e-10 70.5 44 79.5
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 3.9e-10 70.5 139 33.8
FAN20G2451 Fragaria x ananassa HOM05D009889 ORTHO05D003215 1.8e-07 61.6 45 68.9
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 9.1e-07 59.3 39 71.8
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 9.1e-07 59.3 39 71.8
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 9.1e-07 59.3 39 71.8
MBI14_g30460_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D014525 1.2e-06 58.9 38 76.3


User provided reference genes

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