Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G1105 Trochodendron aralioides HOM05D005689 ORTHO05D007060 3.3e-77 291.6 144 100.0
Aqoxy6G02106 Aquilegia oxysepala HOM05D005689 ORTHO05D007060 1.7e-73 279.3 144 95.1
GSVIVG01024004001 Vitis vinifera HOM05D005689 ORTHO05D007060 6.5e-73 277.3 144 93.8
Duzib132G1056 Durio zibethinus HOM05D005689 ORTHO05D007060 3.2e-72 275.0 144 92.4
QL11p051049 Quercus lobata HOM05D005689 ORTHO05D007060 3.2e-72 275.0 142 93.7
Ciclev10029529m.g Citrus clementina HOM05D005689 ORTHO05D007060 5.5e-72 274.2 144 91.7
CSS0016500 Camellia sinensis var. sinensis HOM05D005689 ORTHO05D007060 7.2e-72 273.9 144 92.4
CiPaw.05G083600 Carya illinoinensis HOM05D005689 ORTHO05D007060 7.2e-72 273.9 144 93.1
Migut.B00070 Erythranthe guttata HOM05D005689 ORTHO05D007060 7.2e-72 273.9 144 91.7
vmacro02282 Vaccinium macrocarpon HOM05D005689 ORTHO05D007060 9.4e-72 273.5 144 92.4
Atru.chr5.3380 Acer truncatum HOM05D005689 ORTHO05D007060 1.2e-71 273.1 144 91.7
Actinidia20518 Actinidia chinensis HOM05D005689 ORTHO05D007060 1.2e-71 273.1 144 92.4
TPR.G32114 Trifolium pratense HOM05D005689 ORTHO05D007060 1.2e-71 273.1 144 92.4
Dinv41928 Davidia involucrata HOM05D005689 ORTHO05D007060 1.6e-71 272.7 144 93.1
Gohir.A03G205500 Gossypium hirsutum HOM05D005689 ORTHO05D007060 2.1e-71 272.3 144 91.0
Gorai.005G254700 Gossypium raimondii HOM05D005689 ORTHO05D007060 2.1e-71 272.3 144 91.0
MSTRG.19983 Avicennia marina HOM05D005689 ORTHO05D007060 2.7e-71 271.9 144 91.0
Ca_08042_v3 Cicer arietinum L. HOM05D005689 ORTHO05D007060 3.6e-71 271.6 144 91.7
Glyma.09G245600 Glycine max HOM05D005689 ORTHO05D007060 3.6e-71 271.6 144 91.7
Manes.04G071800 Manihot esculenta HOM05D005689 ORTHO05D007060 3.6e-71 271.6 144 90.3
Peaxi162Scf00362g00537 Petunia axillaris HOM05D005689 ORTHO05D007060 3.6e-71 271.6 144 91.0
Actinidia00628 Actinidia chinensis HOM05D005689 ORTHO05D007060 4.7e-71 271.2 144 91.7
Eucgr.I01435 Eucalyptus grandis HOM05D005689 ORTHO05D007060 4.7e-71 271.2 144 90.3
Gohir.D02G226800 Gossypium hirsutum HOM05D005689 ORTHO05D007060 4.7e-71 271.2 144 90.3
Medtr7g081040 Medicago truncatula HOM05D005689 ORTHO05D007060 4.7e-71 271.2 144 91.0
Duzib248G0128 Durio zibethinus HOM05D005689 ORTHO05D007060 6.1e-71 270.8 144 91.0
MBI12_g17551_MAGBIO Magnolia biondii HOM05D005689 ORTHO05D007060 6.1e-71 270.8 144 91.0
CAN.G588.89 Capsicum annuum HOM05D005689 ORTHO05D007060 8.0e-71 270.4 144 91.0
Cfa005260 Carpinus fangiana HOM05D005689 ORTHO05D007060 8.0e-71 270.4 144 91.7
Glyma.18G247400 Glycine max HOM05D005689 ORTHO05D007060 8.0e-71 270.4 144 91.0
Nitab4.5_0003698g0100 Nicotiana tabacum HOM05D005689 ORTHO05D007060 8.0e-71 270.4 144 91.0
Potri.009G136800 Populus trichocarpa HOM05D005689 ORTHO05D007060 8.0e-71 270.4 144 91.7
PGR142G2796 Punica granatum HOM05D005689 ORTHO05D007060 1.0e-70 270.0 144 89.6
Thecc.02G057800 Theobroma cacao HOM05D005689 ORTHO05D007060 1.0e-70 270.0 144 90.3
CiPaw.06G120900 Carya illinoinensis HOM05D005689 ORTHO05D007060 1.4e-70 269.6 144 91.7
ClCG02G003990 Citrullus lanatus HOM05D005689 ORTHO05D007060 1.8e-70 269.2 142 90.8
MELO3C013345.2 Cucumis melo HOM05D005689 ORTHO05D007060 1.8e-70 269.2 142 90.8
CsaV3_7G001110 Cucumis sativus L. HOM05D005689 ORTHO05D007060 1.8e-70 269.2 142 90.8
Sed0024195 Sechium edule HOM05D005689 ORTHO05D007060 1.8e-70 269.2 142 90.8
Solyc01g111690.3 Solanum lycopersicum HOM05D005689 ORTHO05D007060 1.8e-70 269.2 144 90.3
Sopen01g053730 Solanum pennellii HOM05D005689 ORTHO05D007060 1.8e-70 269.2 144 90.3
TWI31G0315 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 1.8e-70 269.2 141 92.2
MD05G1123300 Malus domestica HOM05D005689 ORTHO05D007060 2.3e-70 268.9 144 88.9
Cc09_g09830 Coffea canephora HOM05D005689 ORTHO05D007060 3.0e-70 268.5 140 91.4
Hma1.2p1_0032F.1_g019300 Hydrangea macrophylla HOM05D005689 ORTHO05D007060 3.0e-70 268.5 144 90.3
Lj1g0014054 Lotus japonicus HOM05D005689 ORTHO05D007060 4.0e-70 268.1 144 89.6
Prupe.8G167200 Prunus persica HOM05D005689 ORTHO05D007060 4.0e-70 268.1 144 88.9
VMungo1383G2472 Vigna mungo HOM05D005689 ORTHO05D007060 4.0e-70 268.1 144 89.6
Phvul.008G049900 Phaseolus vulgaris HOM05D005689 ORTHO05D007060 5.2e-70 267.7 144 89.6
Hund06443 Selenicereus undatus HOM05D005689 ORTHO05D007060 8.8e-70 266.9 138 92.0
Cpa.g.sc20.100 Carica papaya HOM05D005689 ORTHO05D007060 1.2e-69 266.5 144 88.9
PGSC0003DMG400006181 Solanum tuberosum HOM05D005689 ORTHO05D007060 1.5e-69 266.2 144 89.6
RcHm_v2.0_Chr6g0278501 Rosa chinensis HOM05D005689 ORTHO05D007060 2.0e-69 265.8 144 87.5
unitig_0.g36 Utricularia gibba HOM05D005689 ORTHO05D007060 2.0e-69 265.8 141 90.1
MD10G1126300 Malus domestica HOM05D005689 ORTHO05D007060 2.6e-69 265.4 144 87.5
CANSAT25G1424 Cannabis sativa HOM05D005689 ORTHO05D007060 3.4e-69 265.0 144 88.9
FvH4_2g15500 Fragaria vesca HOM05D005689 ORTHO05D007060 3.4e-69 265.0 144 86.8
FAN15G3340 Fragaria x ananassa HOM05D005689 ORTHO05D007060 3.4e-69 265.0 144 86.8
Lsat_1_v5_gn_8_123161 Lactuca sativa HOM05D005689 ORTHO05D007060 3.4e-69 265.0 144 88.2
TWI75G0361 Tripterygium wilfordii HOM05D005689 ORTHO05D007060 3.4e-69 265.0 141 90.8
EL10Ac9g21356 Beta vulgaris HOM05D005689 ORTHO05D007060 4.4e-69 264.6 144 88.9
Sc18g0006380 Simmondsia chinensis HOM05D005689 ORTHO05D007060 5.7e-69 264.2 144 87.5
AUR62013016 Chenopodium quinoa HOM05D005689 ORTHO05D007060 7.5e-69 263.8 144 88.2
ECA233G5373 Erigeron canadensis HOM05D005689 ORTHO05D007060 7.5e-69 263.8 136 91.9
FAN27G1498 Fragaria x ananassa HOM05D005689 ORTHO05D007060 7.5e-69 263.8 144 86.1
PSO675G8512 Papaver somniferum HOM05D005689 ORTHO05D007060 7.5e-69 263.8 144 91.0
FAN20G0310 Fragaria x ananassa HOM05D005689 ORTHO05D007060 1.7e-68 262.7 144 86.1
Lalb_Chr21g0306961 Lupinus albus HOM05D005689 ORTHO05D007060 1.7e-68 262.7 144 87.5
PSO541G0653 Papaver somniferum HOM05D005689 ORTHO05D007060 1.7e-68 262.7 144 90.3
HanXRQChr03g0080211 Helianthus annuus HOM05D005689 ORTHO05D007060 2.2e-68 262.3 136 91.2
AUR62010026 Chenopodium quinoa HOM05D005689 ORTHO05D007060 2.8e-68 261.9 144 88.2
FAN24G0830 Fragaria x ananassa HOM05D005689 ORTHO05D007060 2.8e-68 261.9 144 86.1
Os09g0541500 Oryza sativa ssp. japonica HOM05D005689 ORTHO05D007060 8.3e-68 260.4 144 86.8
Zm00001eb331790 Zea mays HOM05D005689 ORTHO05D007060 1.4e-67 259.6 142 87.3
DCAR_030423 Daucus carota HOM05D005689 ORTHO05D007060 3.1e-67 258.5 142 88.7
CDE02G0259 Ceratophyllum demersum HOM05D005689 ORTHO05D007060 4.1e-67 258.1 142 87.3
DCAR_003179 Daucus carota HOM05D005689 ORTHO05D007060 1.2e-66 256.5 140 87.9
SalBow5G2226 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.6e-66 256.1 167 77.2
Nitab4.5_0000283g0450 Nicotiana tabacum HOM05D005689 ORTHO05D007060 2.0e-66 255.8 154 83.8
Oeu019918.2 Olea europaea HOM05D005689 ORTHO05D007060 2.0e-66 255.8 170 76.5
SalBow1G8746 Salvia bowleyana HOM05D005689 ORTHO05D007060 1.0e-65 253.4 143 85.3
Psat3g100360 Pisum sativum HOM05D005689 ORTHO05D007060 2.3e-65 252.3 130 91.5
THA.LOC104824758 Tarenaya hassleriana HOM05D005689 ORTHO05D007060 2.9e-65 251.9 137 88.3
Thhalv10026520m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 3.8e-65 251.5 137 87.6
AL4G10060 Arabidopsis lyrata HOM05D005689 ORTHO05D007060 5.0e-65 251.1 138 87.0
Sp4g00120 Schrenkiella parvula HOM05D005689 ORTHO05D007060 8.6e-65 250.4 138 85.5
AT2G20930 Arabidopsis thaliana HOM05D005689 ORTHO05D007060 1.1e-64 250.0 138 86.2
BcaB08g34950 Brassica carinata HOM05D005689 ORTHO05D007060 1.1e-64 250.0 138 85.5
BcaC07g41181 Brassica carinata HOM05D005689 ORTHO05D007060 1.1e-64 250.0 138 85.5
Carub.0004s0002 Capsella rubella HOM05D005689 ORTHO05D007060 2.5e-64 248.8 138 85.5
SEGI_29883 Sequoiadendron giganteum HOM05D005689 ORTHO05D007060 4.2e-64 248.1 142 83.8
HPP92_012947 Vanilla planifolia HOM05D005689 ORTHO05D007060 5.5e-64 247.7 141 83.0
CARHR174210 Cardamine hirsuta HOM05D005689 ORTHO05D007060 7.2e-64 247.3 138 85.5
BcaNung01978 Brassica carinata HOM05D005689 ORTHO05D007060 1.2e-63 246.5 137 85.4
Aa31LG6G16620 Aethionema arabicum HOM05D005689 ORTHO05D007060 3.6e-63 245.0 137 83.9
A06p48990 Brassica napus HOM05D005689 ORTHO05D007060 8.0e-63 243.8 137 84.7
BraA06t27765Z Brassica rapa HOM05D005689 ORTHO05D007060 8.0e-63 243.8 137 84.7
C07p63680 Brassica napus HOM05D005689 ORTHO05D007060 3.0e-62 241.9 137 83.2
BolC7t46781H Brassica oleracea HOM05D005689 ORTHO05D007060 3.0e-62 241.9 137 83.2
Sabra09G0106300 Salix brachista HOM05D005689 ORTHO05D007060 8.9e-62 240.4 208 63.0
arahy.Tifrunner.gnm1.ann1.9U6RFS Arachis hypogaea HOM05D005689 ORTHO05D007060 1.2e-61 240.0 205 62.9
A09p58620 Brassica napus HOM05D005689 ORTHO05D007060 1.5e-61 239.6 138 84.1
C08p41910 Brassica napus HOM05D005689 ORTHO05D007060 1.5e-61 239.6 138 84.1
BolC8t51754H Brassica oleracea HOM05D005689 ORTHO05D007060 1.5e-61 239.6 138 84.1
BraA09t41249Z Brassica rapa HOM05D005689 ORTHO05D007060 1.5e-61 239.6 138 84.1
Thhalv10000369m.g Eutrema salsugineum HOM05D005689 ORTHO05D007060 3.4e-61 238.4 138 82.6
Sp7g37220 Schrenkiella parvula HOM05D005689 ORTHO05D007060 3.4e-61 238.4 137 84.7
Mapoly0010s0009 Marchantia polymorpha HOM05D005689 ORTHO05D007060 9.8e-61 236.9 139 80.6
Aa31LG7G15690 Aethionema arabicum HOM05D005689 ORTHO05D007060 2.2e-60 235.7 166 71.7
SalBow5G0288 Salvia bowleyana HOM05D005689 ORTHO05D007060 2.8e-60 235.3 156 76.3
Sed0010745 Sechium edule HOM05D005689 ORTHO05D007060 2.7e-58 228.8 142 79.6
ATR0315G041 Amborella trichopoda HOM05D005689 ORTHO05D007060 3.5e-58 228.4 129 85.3
Pp3c13_19460 Physcomitrium patens HOM05D005689 ORTHO05D007060 7.8e-58 227.3 144 74.3
BcaC07g41184 Brassica carinata HOM05D005689 ORTHO05D007060 1.6e-55 219.5 138 76.8
Pp3c12_10830 Physcomitrium patens HOM05D005689 ORTHO05D007060 5.2e-54 214.5 144 70.1
HPP92_007243 Vanilla planifolia HOM05D005689 ORTHO05D007060 3.5e-50 201.8 119 79.0
CBR_g33926 Chara braunii HOM05D000604 ORTHO05D004856 7.8e-50 200.7 139 66.2
SMO228G0084 Selaginella moellendorffii HOM05D005689 ORTHO05D007060 7.8e-50 200.7 138 64.5
CARHR111830 Cardamine hirsuta HOM05D005689 ORTHO05D007060 1.7e-49 199.5 112 84.8
SGA_v2.0_scaffold80G25838 Striga asiatica HOM05D005689 ORTHO05D007060 8.6e-49 197.2 160 63.1
Nitab4.5_0000079g0270 Nicotiana tabacum HOM05D005689 ORTHO05D007060 6.2e-47 191.0 120 79.2
Nn6g31939 Nelumbo nucifera HOM05D005689 ORTHO05D007060 3.1e-46 188.7 97 92.8
arahy.Tifrunner.gnm1.ann1.B1HGXN Arachis hypogaea HOM05D005689 ORTHO05D007060 1.2e-45 186.8 99 88.9
Potri.004G176500 Populus trichocarpa HOM05D005689 ORTHO05D007060 3.0e-41 172.2 120 73.3
Rhsim11G0192800 Rhododendron simsii HOM05D005689 ORTHO05D007060 1.1e-30 137.1 74 93.2
Cre03.g165650 Chlamydomonas reinhardtii HOM05D005689 ORTHO05D007060 1.1e-27 127.1 145 45.5
AUR62017814 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.4e-27 126.7 68 89.7
Oeu028973.1 Olea europaea HOM05D005689 ORTHO05D007060 9.2e-27 124.0 74 82.4
AUR62003497 Chenopodium quinoa HOM05D005689 ORTHO05D007060 1.2e-26 123.6 68 86.8
RcHm_v2.0_Chr4g0392001 Rosa chinensis HOM05D005689 ORTHO05D007060 2.5e-24 115.9 140 47.1
Ah.01g023120 Amaranthus hybridus HOM05D005689 ORTHO05D007060 1.6e-15 86.7 43 90.7
MCO02G011 Micromonas commoda HOM05D005689 ORTHO05D007060 6.4e-12 74.7 157 30.6
Cfa022471 Carpinus fangiana HOM05D000441 ORTHO05D124224 8.4e-12 74.3 161 33.5
SGA_v2.0_scaffold199G41205 Striga asiatica HOM05D005689 ORTHO05D007060 1.9e-11 73.2 53 64.2
PRCOL_00005825 Prasinoderma coloniale HOM05D005689 ORTHO05D007060 4.6e-10 68.6 117 34.2
HanXRQChr05g0150591 Helianthus annuus HOM05D005689 ORTHO05D007060 5.1e-09 65.1 44 68.2
SGA_v2.0_scaffold11G05770 Striga asiatica HOM05D005689 ORTHO05D004382 2.1e-07 59.7 36 69.4


User provided reference genes

Program Settings