Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G1104 Trochodendron aralioides HOM05D007716 ORTHO05D009780 3.3e-36 154.5 75 100.0
TAR628G0805 Trochodendron aralioides HOM05D007716 ORTHO05D009780 1.7e-19 99.0 63 77.8
Haze_10368 Corylus avellana HOM05D007716 ORTHO05D009780 1.1e-15 86.3 63 66.7
QL11p026900 Quercus lobata HOM05D007716 ORTHO05D009780 5.5e-15 84.0 72 58.3
Nn5g29758 Nelumbo nucifera HOM05D007716 ORTHO05D009780 9.4e-15 83.2 66 62.1
Manes.10G092200 Manihot esculenta HOM05D007716 ORTHO05D009780 1.6e-14 82.4 63 65.1
CiPaw.05G026000 Carya illinoinensis HOM05D007716 ORTHO05D009780 2.7e-14 81.6 63 61.9
Prupe.8G076600 Prunus persica HOM05D007716 ORTHO05D009780 4.7e-14 80.9 60 63.3
Hma1.2p1_0703F.1_g206280 Hydrangea macrophylla HOM05D007716 ORTHO05D009780 8.0e-14 80.1 59 62.7
Potri.009G080400 Populus trichocarpa HOM05D007716 ORTHO05D009780 1.8e-13 79.0 64 60.9
Potri.001G286200 Populus trichocarpa HOM05D007716 ORTHO05D009780 4.0e-13 77.8 64 59.4
Sabra09G0062200 Salix brachista HOM05D007716 ORTHO05D009780 2.6e-12 75.1 64 56.2
Cpa.g.sc20.53 Carica papaya HOM05D007716 ORTHO05D009780 3.4e-12 74.7 69 53.6
MD10G1057800 Malus domestica HOM05D007716 ORTHO05D009780 3.4e-12 74.7 67 55.2
PSO210G3893 Papaver somniferum HOM05D007716 ORTHO05D009780 4.4e-12 74.3 66 57.6
PSO761G0345 Papaver somniferum HOM05D007716 ORTHO05D009780 4.4e-12 74.3 66 57.6
Sabra16G0178700 Salix brachista HOM05D007716 ORTHO05D009780 9.7e-12 73.2 64 56.2
TWI23G0541 Tripterygium wilfordii HOM05D007716 ORTHO05D009780 1.3e-11 72.8 63 60.3
RcHm_v2.0_Chr6g0269271 Rosa chinensis HOM05D007716 ORTHO05D009780 2.8e-11 71.6 63 54.0
PGSC0003DMG400003116 Solanum tuberosum HOM05D007716 ORTHO05D009780 3.7e-11 71.2 61 55.7
FvH4_2g11070 Fragaria vesca HOM05D007716 ORTHO05D009780 1.1e-10 69.7 63 54.0
FAN24G2612 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.1e-10 69.7 63 54.0
FAN20G1331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 2.4e-10 68.6 63 52.4
Nitab4.5_0010352g0060 Nicotiana tabacum HOM05D007716 ORTHO05D009780 3.1e-10 68.2 63 57.1
Oeu059885.1 Olea europaea HOM05D007716 ORTHO05D009780 4.1e-10 67.8 51 64.7
Solyc01g106380.2 Solanum lycopersicum HOM05D007716 ORTHO05D009780 5.3e-10 67.4 65 53.8
Cc02_g20520 Coffea canephora HOM05D007716 ORTHO05D009780 9.1e-10 66.6 61 50.8
FAN15G0824 Fragaria x ananassa HOM05D007716 ORTHO05D009780 1.2e-09 66.2 63 50.8
Nitab4.5_0009020g0070 Nicotiana tabacum HOM05D007716 ORTHO05D009780 1.2e-09 66.2 63 55.6
vmacro01903 Vaccinium macrocarpon HOM05D001206 ORTHO05D002068 1.2e-09 66.2 61 54.1
Atru.chr6.1374 Acer truncatum HOM05D007716 ORTHO05D009780 2.0e-09 65.5 62 54.8
Lj6g0015505 Lotus japonicus HOM05D007716 ORTHO05D009780 2.7e-09 65.1 66 50.0
FAN27G0331 Fragaria x ananassa HOM05D007716 ORTHO05D009780 3.5e-09 64.7 60 51.7
Sopen01g048750 Solanum pennellii HOM05D007716 ORTHO05D009780 3.5e-09 64.7 61 55.7
Thecc.02G037300 Theobroma cacao HOM05D007716 ORTHO05D009780 3.5e-09 64.7 60 56.7
COL.COLO4_17851 Corchorus olitorius HOM05D007716 ORTHO05D009780 4.5e-09 64.3 60 58.3
Gohir.D12G040700 Gossypium hirsutum HOM05D007716 ORTHO05D009780 4.5e-09 64.3 60 55.0
Gorai.008G042500 Gossypium raimondii HOM05D007716 ORTHO05D009780 5.9e-09 63.9 60 55.0
Aqoxy6G00623 Aquilegia oxysepala HOM05D000043 ORTHO05D002888 7.7e-09 63.5 66 50.0
Ciclev10029299m.g Citrus clementina HOM05D007716 ORTHO05D009780 2.2e-08 62.0 60 55.0
Peaxi162Scf00299g00026 Petunia axillaris HOM05D007716 ORTHO05D009780 2.9e-08 61.6 60 55.0
Sed0024047 Sechium edule HOM05D007716 ORTHO05D009780 2.9e-08 61.6 66 51.5
MSTRG.16641 Avicennia marina HOM05D007716 ORTHO05D009780 3.8e-08 61.2 66 48.5
Duzib132G0367 Durio zibethinus HOM05D007716 ORTHO05D009780 3.8e-08 61.2 69 49.3
AUR62027073 Chenopodium quinoa HOM05D007716 ORTHO05D009780 5.0e-08 60.8 75 49.3
CANSAT54G1223 Cannabis sativa HOM05D007716 ORTHO05D009780 6.5e-08 60.5 67 44.8
ClCG10G009750 Citrullus lanatus HOM05D007716 ORTHO05D009780 6.5e-08 60.5 58 53.4
Migut.B00514 Erythranthe guttata HOM05D007716 ORTHO05D009780 8.5e-08 60.1 65 46.2
Phvul.006G198900 Phaseolus vulgaris HOM05D007716 ORTHO05D009780 8.5e-08 60.1 61 52.5
AUR62043644 Chenopodium quinoa HOM05D007716 ORTHO05D009780 1.1e-07 59.7 75 46.7
Gohir.A12G031600 Gossypium hirsutum HOM05D007716 ORTHO05D009780 1.1e-07 59.7 60 51.7
VMungo0540G1513 Vigna mungo HOM05D007716 ORTHO05D009780 1.1e-07 59.7 60 51.7
BcaC01g02685 Brassica carinata HOM05D007716 ORTHO05D009780 1.5e-07 59.3 65 52.3
C03p61760 Brassica napus HOM05D007716 ORTHO05D009780 1.5e-07 59.3 65 52.3
BolC3t18437H Brassica oleracea HOM05D007716 ORTHO05D009780 1.5e-07 59.3 65 52.3
Eucgr.I02564 Eucalyptus grandis HOM05D007716 ORTHO05D009780 1.5e-07 59.3 66 45.5
MBI16_g17833_MAGBIO Magnolia biondii HOM05D007716 ORTHO05D009780 1.5e-07 59.3 50 64.0
PGR142G1403 Punica granatum HOM05D007716 ORTHO05D009780 1.9e-07 58.9 65 50.8
AL8G41850 Arabidopsis lyrata HOM05D007716 ORTHO05D009780 2.5e-07 58.5 66 50.0
Lj9P341T42 Lonicera japonica HOM05D007716 ORTHO05D009780 3.2e-07 58.2 40 62.5
A06p31220 Brassica napus HOM05D007716 ORTHO05D009780 4.2e-07 57.8 67 55.2
Sp2g27560 Schrenkiella parvula HOM05D007716 ORTHO05D009780 5.5e-07 57.4 66 54.5
THA.LOC104799649 Tarenaya hassleriana HOM05D007716 ORTHO05D009780 5.5e-07 57.4 69 49.3
Actinidia23910 Actinidia chinensis HOM05D001242 ORTHO05D001089 7.2e-07 57.0 37 75.7
BraA06t26061Z Brassica rapa HOM05D007716 ORTHO05D009780 9.4e-07 56.6 67 55.2
Ca_00186_v3 Cicer arietinum L. HOM05D007716 ORTHO05D009780 9.4e-07 56.6 60 48.3
SalBow6G6774 Salvia bowleyana HOM05D007716 ORTHO05D009780 9.4e-07 56.6 62 43.5
CARHR278450 Cardamine hirsuta HOM05D007716 ORTHO05D009780 1.6e-06 55.8 64 50.0
Glyma.13G254000 Glycine max HOM05D007716 ORTHO05D009780 1.6e-06 55.8 60 46.7
arahy.Tifrunner.gnm1.ann1.1SXR49 Arachis hypogaea HOM05D007716 ORTHO05D009780 3.6e-06 54.7 59 40.7
Glyma.15G060900 Glycine max HOM05D007716 ORTHO05D009780 3.6e-06 54.7 64 43.8
DCAR_029284 Daucus carota HOM05D007716 ORTHO05D009780 8.0e-06 53.5 72 43.1


User provided reference genes

Program Settings