Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G1061 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.9e-34 148.7 77 100.0
TAR365G1262 Trochodendron aralioides HOM05D000137 ORTHO05D000503 4.3e-23 110.9 64 82.8
TAR636G3077 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.7e-19 99.0 59 83.1
TAR369G0036 Trochodendron aralioides HOM05D001463 ORTHO05D001282 1.8e-16 89.0 57 73.7
TAR623G0111 Trochodendron aralioides HOM05D001463 ORTHO05D001282 3.0e-16 88.2 58 72.4
MD11G1091200 Malus domestica HOM05D001463 ORTHO05D001282 5.5e-10 67.4 53 62.3
MD03G1083100 Malus domestica HOM05D001463 ORTHO05D001282 7.2e-10 67.0 52 61.5
Prupe.6G067400 Prunus persica HOM05D001463 ORTHO05D001282 7.2e-10 67.0 60 56.7
GSVIVG01016436001 Vitis vinifera HOM05D001463 ORTHO05D001282 7.2e-10 67.0 61 60.7
CiPaw.13G087300 Carya illinoinensis HOM05D001463 ORTHO05D001282 9.4e-10 66.6 60 55.0
Dinv16275 Davidia involucrata HOM05D001463 ORTHO05D001282 1.2e-09 66.2 58 56.9
Cfa011585 Carpinus fangiana HOM05D001463 ORTHO05D001282 1.6e-09 65.9 56 58.9
Haze_24203 Corylus avellana HOM05D001463 ORTHO05D001282 2.1e-09 65.5 56 58.9
GSVIVG01024854001 Vitis vinifera HOM05D001463 ORTHO05D001282 1.4e-08 62.8 51 54.9
Duzib168G0381 Durio zibethinus HOM05D001463 ORTHO05D001282 1.8e-08 62.4 51 52.9
MBI14_g02863_MAGBIO Magnolia biondii HOM05D001463 ORTHO05D001282 2.3e-08 62.0 53 56.6
Potri.009G038300 Populus trichocarpa HOM05D001463 ORTHO05D001282 3.9e-08 61.2 53 54.7
Ciclev10029407m.g Citrus clementina HOM05D001463 ORTHO05D001282 6.7e-08 60.5 60 46.7
TWI31G0608 Tripterygium wilfordii HOM05D001463 ORTHO05D001282 8.8e-08 60.1 56 48.2
CSS0026922 Camellia sinensis var. sinensis HOM05D001463 ORTHO05D001282 1.1e-07 59.7 58 53.4
Potri.006G092400 Populus trichocarpa HOM05D001463 ORTHO05D001282 1.1e-07 59.7 53 54.7
Thecc.09G312500 Theobroma cacao HOM05D001463 ORTHO05D001282 1.1e-07 59.7 53 49.1
FvH4_3g37190 Fragaria vesca HOM05D001463 ORTHO05D001282 1.5e-07 59.3 57 52.6
CiPaw.10G149400 Carya illinoinensis HOM05D001463 ORTHO05D001282 2.0e-07 58.9 46 63.0
Duzib150G0778 Durio zibethinus HOM05D001463 ORTHO05D001282 2.6e-07 58.5 45 55.6
RcHm_v2.0_Chr5g0066931 Rosa chinensis HOM05D001463 ORTHO05D001282 2.6e-07 58.5 64 51.6
TPR.G34922 Trifolium pratense HOM05D001463 ORTHO05D001282 2.6e-07 58.5 53 54.7
GSVIVG01034066001 Vitis vinifera HOM05D001463 ORTHO05D001282 2.6e-07 58.5 62 48.4
Dinv34453 Davidia involucrata HOM05D001463 ORTHO05D001282 3.3e-07 58.2 55 56.4
COL.COLO4_18603 Corchorus olitorius HOM05D001463 ORTHO05D001282 7.4e-07 57.0 46 56.5
vmacro20196 Vaccinium macrocarpon HOM05D001463 ORTHO05D001282 7.4e-07 57.0 59 49.2
Cfa017303 Carpinus fangiana HOM05D001463 ORTHO05D001282 9.7e-07 56.6 48 58.3
Dinv37114 Davidia involucrata HOM05D001463 ORTHO05D001282 9.7e-07 56.6 55 54.5
Hma1.2p1_0671F.1_g200570 Hydrangea macrophylla HOM05D001463 ORTHO05D001282 9.7e-07 56.6 49 55.1
CiPaw.09G201400 Carya illinoinensis HOM05D001463 ORTHO05D001282 1.3e-06 56.2 52 53.8
Haze_20884 Corylus avellana HOM05D001463 ORTHO05D001282 1.3e-06 56.2 46 58.7
Haze_20893 Corylus avellana HOM05D001463 ORTHO05D001282 1.3e-06 56.2 46 58.7
Nn2g11290 Nelumbo nucifera HOM05D001463 ORTHO05D001282 1.3e-06 56.2 61 49.2
QL01p028214 Quercus lobata HOM05D001463 ORTHO05D001282 1.3e-06 56.2 60 46.7
FAN11G0374 Fragaria x ananassa HOM05D001463 ORTHO05D001282 1.7e-06 55.8 55 50.9
Sabra10G0151000 Salix brachista HOM05D001463 ORTHO05D001282 1.7e-06 55.8 53 54.7
Atru.chr12.267 Acer truncatum HOM05D001463 ORTHO05D001282 2.2e-06 55.5 56 51.8
Actinidia02902 Actinidia chinensis HOM05D001463 ORTHO05D001282 2.2e-06 55.5 46 60.9
FAN21G1105 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.2e-06 55.5 54 51.9
FAN25G3555 Fragaria x ananassa HOM05D001463 ORTHO05D001282 2.2e-06 55.5 54 51.9
PGR102G2576 Punica granatum HOM05D001463 ORTHO05D001282 2.2e-06 55.5 53 56.6
CiPaw.14G063800 Carya illinoinensis HOM05D001463 ORTHO05D001282 2.8e-06 55.1 57 52.6
CANSAT56G2845 Cannabis sativa HOM05D001463 ORTHO05D001282 3.7e-06 54.7 47 61.7
Ca_07570_v3 Cicer arietinum L. HOM05D001463 ORTHO05D001282 3.7e-06 54.7 54 55.6
Duzib093G1451 Durio zibethinus HOM05D001463 ORTHO05D001282 3.7e-06 54.7 57 50.9
Manes.02G126600 Manihot esculenta HOM05D001463 ORTHO05D001282 3.7e-06 54.7 52 48.1
CANSAT54G2006 Cannabis sativa HOM05D001463 ORTHO05D001282 4.8e-06 54.3 65 46.2
Haze_17151 Corylus avellana HOM05D001463 ORTHO05D001282 4.8e-06 54.3 58 53.4
Lj1g0006352 Lotus japonicus HOM05D001463 ORTHO05D001282 4.8e-06 54.3 52 53.8
Potri.008G061700 Populus trichocarpa HOM05D001463 ORTHO05D001282 4.8e-06 54.3 58 46.6
COL.COLO4_14694 Corchorus olitorius HOM05D001463 ORTHO05D001282 6.3e-06 53.9 61 45.9
FAN16G2865 Fragaria x ananassa HOM05D001463 ORTHO05D001282 6.3e-06 53.9 61 47.5
Atru.chr3.4029 Acer truncatum HOM05D001463 ORTHO05D001282 8.2e-06 53.5 69 46.4
CiPaw.01G293300 Carya illinoinensis HOM05D001463 ORTHO05D001282 8.2e-06 53.5 50 54.0
Duzib170G0250 Durio zibethinus HOM05D001463 ORTHO05D001282 8.2e-06 53.5 58 51.7
Lalb_Chr01g0022791 Lupinus albus HOM05D001463 ORTHO05D001282 8.2e-06 53.5 58 50.0
Manes.07G122500 Manihot esculenta HOM05D001463 ORTHO05D001282 8.2e-06 53.5 59 50.8
Thecc.05G028900 Theobroma cacao HOM05D001463 ORTHO05D001282 8.2e-06 53.5 59 45.8


User provided reference genes

Program Settings