Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 2.1e-197 692.2 348 100.0
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 3.2e-142 508.8 447 61.7
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.2e-141 506.9 447 61.7
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 2.0e-139 499.6 443 60.3
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 3.3e-139 498.8 443 61.9
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 8.2e-138 494.2 444 59.5
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 9.1e-137 490.7 445 59.3
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.6e-133 479.9 439 59.5
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.7e-133 479.2 445 57.8
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 4.7e-133 478.4 445 57.5
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 5.2e-132 474.9 476 55.9
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 8.8e-132 474.2 445 58.0
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 1.1e-131 473.8 445 57.1
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 4.4e-131 471.9 445 56.9
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 7.5e-131 471.1 395 61.3
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 8.2e-130 467.6 445 56.9
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 1.1e-129 467.2 442 57.5
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 4.1e-129 465.3 445 57.1
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 9.1e-129 464.2 445 57.1
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 2.0e-128 463.0 445 57.1
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 4.5e-128 461.8 445 55.5
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 6.5e-127 458.0 431 57.8
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 6.5e-127 458.0 463 53.3
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.1e-126 457.2 442 56.1
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 1.5e-126 456.8 446 54.9
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 1.5e-126 456.8 441 55.8
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 2.5e-126 456.1 443 55.5
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 3.2e-126 455.7 453 53.9
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 3.2e-126 455.7 439 55.1
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 5.5e-126 454.9 445 54.8
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 7.2e-126 454.5 446 54.7
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 3.6e-125 452.2 442 55.0
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 3.6e-125 452.2 445 55.3
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 3.6e-125 452.2 445 54.8
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 4.7e-125 451.8 441 55.3
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 4.7e-125 451.8 444 54.7
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 1.0e-124 450.7 434 55.5
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 5.2e-124 448.4 425 56.2
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 6.8e-124 448.0 442 55.0
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 1.5e-123 446.8 418 57.9
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 2.6e-123 446.0 441 53.5
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 5.7e-123 444.9 441 54.6
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 1.7e-122 443.4 445 55.1
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 1.8e-121 439.9 446 54.5
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 1.8e-121 439.9 443 54.2
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.4e-121 439.5 445 54.6
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 3.1e-121 439.1 441 52.4
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 2.9e-119 432.6 429 53.8
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.9e-118 429.9 433 55.0
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 2.5e-118 429.5 447 51.5
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 2.5e-118 429.5 435 53.8
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 9.4e-118 427.6 426 55.4
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.1e-117 426.4 439 53.3
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 4.0e-116 422.2 441 52.6
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 8.8e-116 421.0 445 51.7
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 2.0e-115 419.9 396 55.8
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 1.3e-114 417.2 440 50.9
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 2.2e-114 416.4 431 52.7
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 2.2e-114 416.4 449 53.7
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.8e-114 416.0 445 51.7
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 3.7e-114 415.6 434 52.1
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 3.7e-114 415.6 444 52.0
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 6.3e-114 414.8 445 51.0
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 6.3e-114 414.8 446 51.8
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.3e-114 414.5 387 56.8
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 1.4e-113 413.7 433 52.0
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 3.1e-113 412.5 441 52.2
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 5.4e-113 411.8 440 50.7
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 1.0e-111 407.5 448 50.0
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 4.3e-110 402.1 435 52.6
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 1.0e-108 397.5 359 59.1
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 1.4e-108 397.1 466 47.4
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 1.4e-108 397.1 388 55.7
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 4.0e-108 395.6 363 57.0
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 6.8e-108 394.8 440 50.0
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 6.8e-108 394.8 389 54.5
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.2e-107 394.0 405 52.1
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 2.0e-107 393.3 446 49.3
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 1.3e-106 390.6 457 49.0
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 1.4e-105 387.1 414 52.7
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 3.2e-105 386.0 330 65.2
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 1.0e-103 380.9 635 39.4
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 1.5e-102 377.1 451 47.5
Lj5A171G136 Lonicera japonica HOM05D005203 ORTHO05D006383 6.8e-100 368.2 240 75.0
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 2.6e-99 366.3 435 48.3
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 3.7e-98 362.5 328 56.7
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 6.4e-98 361.7 429 49.9
VMungo1309G0298 Vigna mungo HOM05D005203 ORTHO05D006383 9.2e-97 357.8 233 75.1
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 6.0e-96 355.1 411 49.6
QL11p056319 Quercus lobata HOM05D005203 ORTHO05D006383 6.0e-96 355.1 229 76.4
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 2.8e-93 346.3 233 74.2
Sopen01g054300 Solanum pennellii HOM05D005203 ORTHO05D006383 8.9e-92 341.3 237 71.3
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 1.5e-91 340.5 324 56.8
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.0e-91 340.1 360 51.1
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 3.4e-91 339.3 385 49.9
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 5.8e-91 338.6 414 47.3
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 2.9e-90 336.3 362 49.7
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.7e-90 335.9 387 48.6
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 4.9e-90 335.5 387 48.6
Medtr3g118520 Medicago truncatula HOM05D005203 ORTHO05D006383 1.4e-89 334.0 233 69.5
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 9.2e-89 331.3 347 51.6
ATR0807G194 Amborella trichopoda HOM05D005203 ORTHO05D006383 1.9e-86 323.6 233 69.5
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 5.6e-86 322.0 332 53.3
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 2.0e-83 313.5 353 51.8
CDE07G0143 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 3.3e-78 296.2 235 61.7
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.1e-76 291.2 445 40.7
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 2.4e-73 280.0 437 37.8
PGSC0003DMG402014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 2.9e-66 256.5 168 72.6
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 8.4e-66 255.0 425 39.1
CAN.G1725.2 Capsicum annuum HOM05D005203 ORTHO05D006383 1.2e-64 251.1 161 74.5
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 4.6e-64 249.2 387 40.8
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 1.6e-61 240.7 440 36.8
CSS0033501 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.9e-58 229.9 143 74.8
CSS0046634 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 2.9e-58 229.9 143 74.8
CSS0007702 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 5.5e-57 225.7 143 73.4
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 8.7e-55 218.4 364 37.4
Eucgr.L00583 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.8e-50 203.0 123 78.0
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.0e-47 194.9 456 29.4
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 2.3e-39 167.2 96 78.1
CANSAT78G0806 Cannabis sativa HOM05D005203 ORTHO05D006383 1.1e-38 164.9 105 76.2
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 5.7e-38 162.5 95 76.8
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 1.6e-37 161.0 92 77.2
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.2e-35 154.8 95 71.6
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 7.7e-35 152.1 96 71.9
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 3.8e-34 149.8 120 60.8
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 4.2e-33 146.4 93 72.0
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 9.4e-33 145.2 80 77.5
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 2.1e-32 144.1 115 59.1
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 4.6e-32 142.9 92 66.3
AL7G13060 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 1.5e-30 137.9 112 63.4
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 3.7e-29 133.3 339 28.0
GSVIVG01002907001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.5e-27 127.9 71 84.5
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 3.4e-27 126.7 106 56.6
SEGI_16108 Sequoiadendron giganteum HOM05D005203 ORTHO05D006383 2.4e-20 104.0 102 54.9
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 7.7e-19 99.0 93 49.5
GSVIVG01002825001 Vitis vinifera HOM05D005203 ORTHO05D006383 9.4e-17 92.0 69 69.6
PGSC0003DMG401014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 8.0e-16 89.0 66 71.2
CAN.G1725.1 Capsicum annuum HOM05D005203 ORTHO05D006383 2.3e-15 87.4 69 66.7
MCO01G683 Micromonas commoda HOM05D005203 ORTHO05D006383 4.8e-13 79.7 161 32.3
AL6G14740 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 2.4e-12 77.4 45 75.6
Eucgr.L00581 Eucalyptus grandis HOM05D005203 ORTHO05D192196 5.7e-06 56.2 43 67.4


User provided reference genes

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