Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0933 Trochodendron aralioides HOM05D007935 ORTHO05D007393 2.6e-89 332.0 168 100.0
TAR628G0171 Trochodendron aralioides HOM05D007935 ORTHO05D007393 1.2e-49 200.3 170 64.7
Nn5g27748 Nelumbo nucifera HOM05D007935 ORTHO05D007393 1.7e-35 153.3 174 51.7
Nn1g08393 Nelumbo nucifera HOM05D007935 ORTHO05D007393 2.7e-33 146.0 167 52.1
QL10p037244 Quercus lobata HOM05D009958 ORTHO05D007393 1.6e-22 110.2 159 45.3
QL10p038114 Quercus lobata HOM05D009958 ORTHO05D007393 1.6e-22 110.2 159 45.3
Dinv08012 Davidia involucrata HOM05D007935 ORTHO05D007393 3.6e-22 109.0 167 44.3
Manes.12G081400 Manihot esculenta HOM05D009958 ORTHO05D007393 4.0e-21 105.5 160 43.8
Sabra13G0096500 Salix brachista HOM05D007935 ORTHO05D007393 1.3e-19 100.5 185 38.4
Duzib177G0305 Durio zibethinus HOM05D007935 ORTHO05D007393 1.8e-18 96.7 175 36.6
Haze_19351 Corylus avellana HOM05D009958 ORTHO05D007393 2.4e-18 96.3 164 44.5
Manes.02G191100 Manihot esculenta HOM05D007935 ORTHO05D007393 5.4e-18 95.1 183 38.3
Thecc.08G181700 Theobroma cacao HOM05D007935 ORTHO05D007393 5.4e-18 95.1 172 37.2
Sabra19G0095700 Salix brachista HOM05D007935 ORTHO05D007393 2.9e-16 89.4 182 35.7
Cfa018195 Carpinus fangiana HOM05D007935 ORTHO05D007393 5.0e-16 88.6 179 37.4
Potri.013G114000 Populus trichocarpa HOM05D007935 ORTHO05D007393 1.1e-15 87.4 188 37.2
Thecc.01G147200 Theobroma cacao HOM05D009958 ORTHO05D007393 1.5e-15 87.0 172 39.5
Manes.18G100400 Manihot esculenta HOM05D007935 ORTHO05D007393 1.9e-15 86.7 195 36.4
Dinv41698 Davidia involucrata HOM05D007935 ORTHO05D007393 9.5e-15 84.3 160 40.0
Migut.C01245 Erythranthe guttata HOM05D007935 ORTHO05D007393 9.5e-15 84.3 157 36.9
Cpa.g.sc66.51 Carica papaya HOM05D007935 ORTHO05D007393 2.1e-14 83.2 180 39.4
Rhsim06G0096700 Rhododendron simsii HOM05D007935 ORTHO05D007393 2.1e-14 83.2 174 36.2
FAN12G0476 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.8e-14 82.8 169 42.0
PGR102G0669 Punica granatum HOM05D007935 ORTHO05D007393 2.8e-14 82.8 163 35.6
Cpa.g.sc138.32 Carica papaya HOM05D009958 ORTHO05D007393 3.6e-14 82.4 158 34.8
Manes.13G153300 Manihot esculenta HOM05D009958 ORTHO05D007393 4.7e-14 82.0 159 35.8
Gohir.A09G117400 Gossypium hirsutum HOM05D007935 ORTHO05D007393 6.1e-14 81.6 181 37.6
TWI32G0406 Tripterygium wilfordii HOM05D007935 ORTHO05D007393 8.0e-14 81.3 157 37.6
Ciclev10026723m.g Citrus clementina HOM05D009958 ORTHO05D007393 1.0e-13 80.9 163 38.0
Cfa020918 Carpinus fangiana HOM05D009958 ORTHO05D007393 1.4e-13 80.5 162 40.7
Duzib264G0789 Durio zibethinus HOM05D009958 ORTHO05D007393 1.4e-13 80.5 171 36.3
PGSC0003DMG400009223 Solanum tuberosum HOM05D007935 ORTHO05D007393 1.4e-13 80.5 167 35.9
COL.COLO4_33532 Corchorus olitorius HOM05D009958 ORTHO05D007393 1.8e-13 80.1 180 35.6
Potri.018G137700 Populus trichocarpa HOM05D009958 ORTHO05D007393 3.0e-13 79.3 162 42.6
Potri.T045901 Populus trichocarpa HOM05D009958 ORTHO05D007393 4.0e-13 79.0 162 42.6
Prupe.8G056300 Prunus persica HOM05D007935 ORTHO05D007393 4.0e-13 79.0 181 34.8
QL02p034017 Quercus lobata HOM05D007935 ORTHO05D007393 4.0e-13 79.0 184 34.8
Nitab4.5_0000560g0100 Nicotiana tabacum HOM05D007935 ORTHO05D007393 5.2e-13 78.6 198 31.3
Gorai.007G067700 Gossypium raimondii HOM05D009958 ORTHO05D007393 8.9e-13 77.8 128 38.3
FvH4_4g19940 Fragaria vesca HOM05D007935 ORTHO05D007393 1.2e-12 77.4 171 38.6
Gohir.A11G058500 Gossypium hirsutum HOM05D009958 ORTHO05D007393 1.2e-12 77.4 128 36.7
Potri.019G084500 Populus trichocarpa HOM05D007935 ORTHO05D007393 2.0e-12 76.6 192 35.9
Glyma.02G074300 Glycine max HOM05D007935 ORTHO05D007393 5.7e-12 75.1 172 33.7
Glyma.16G156000 Glycine max HOM05D007935 ORTHO05D007393 5.7e-12 75.1 171 32.7
Solyc11g017390.2 Solanum lycopersicum HOM05D007935 ORTHO05D007393 5.7e-12 75.1 167 35.9
Gohir.D11G062800 Gossypium hirsutum HOM05D009958 ORTHO05D007393 9.8e-12 74.3 128 39.1
Gorai.006G131900 Gossypium raimondii HOM05D007935 ORTHO05D007393 9.8e-12 74.3 182 36.8
Phvul.004G084000 Phaseolus vulgaris HOM05D007935 ORTHO05D007393 1.3e-11 73.9 168 33.3
Sabra19G0000200 Salix brachista HOM05D009958 ORTHO05D007393 1.3e-11 73.9 164 38.4
Gohir.D09G114200 Gossypium hirsutum HOM05D007935 ORTHO05D007393 1.7e-11 73.6 182 36.8
COL.COLO4_16292 Corchorus olitorius HOM05D007935 ORTHO05D007393 2.9e-11 72.8 180 33.9
Glyma.20G176200 Glycine max HOM05D007935 ORTHO05D007393 2.9e-11 72.8 174 33.9
Hma1.2p1_0363F.1_g136610 Hydrangea macrophylla HOM05D007935 ORTHO05D007393 2.9e-11 72.8 159 35.2
Eucgr.F04128 Eucalyptus grandis HOM05D007935 ORTHO05D007393 4.1e-10 68.9 165 33.9
Sopen11g009330 Solanum pennellii HOM05D007935 ORTHO05D007393 4.1e-10 68.9 168 34.5
Haze_17920 Corylus avellana HOM05D007935 ORTHO05D007393 5.4e-10 68.6 170 34.7
Glyma.10G215500 Glycine max HOM05D007935 ORTHO05D007393 7.0e-10 68.2 173 34.1
Lj2g0007380 Lotus japonicus HOM05D007935 ORTHO05D007393 7.0e-10 68.2 167 31.7
FAN07G1822 Fragaria x ananassa HOM05D007935 ORTHO05D007393 2.0e-09 66.6 167 32.9
CiPaw.16G062200 Carya illinoinensis HOM05D007935 ORTHO05D007393 3.5e-09 65.9 175 32.6
Oeu017878.1 Olea europaea HOM05D007935 ORTHO05D007393 7.8e-09 64.7 171 31.0
TPR.G39557 Trifolium pratense HOM05D007935 ORTHO05D007393 7.8e-09 64.7 170 33.5
Aqoxy2G00980 Aquilegia oxysepala HOM05D009958 ORTHO05D007393 1.0e-08 64.3 157 35.7
RcHm_v2.0_Chr6g0272051 Rosa chinensis HOM05D007935 ORTHO05D007393 1.0e-08 64.3 170 32.9
Oeu039600.1 Olea europaea HOM05D007935 ORTHO05D007393 1.7e-08 63.5 162 32.1
arahy.Tifrunner.gnm1.ann1.B1B3Q7 Arachis hypogaea HOM05D007935 ORTHO05D007393 2.3e-08 63.2 163 34.4
Ciclev10003091m.g Citrus clementina HOM05D007935 ORTHO05D007393 2.3e-08 63.2 151 33.1
Nitab4.5_0000422g0110 Nicotiana tabacum HOM05D007935 ORTHO05D007393 2.3e-08 63.2 218 29.4
Lalb_Chr19g0129781 Lupinus albus HOM05D007935 ORTHO05D007393 3.0e-08 62.8 162 32.1
Oeu052900.1 Olea europaea HOM05D009958 ORTHO05D007393 3.9e-08 62.4 158 31.6
Peaxi162Scf00310g00073 Petunia axillaris HOM05D007935 ORTHO05D007393 3.9e-08 62.4 198 30.8
SGA_v2.0_scaffold118G32471 Striga asiatica HOM05D007935 ORTHO05D007393 2.5e-07 59.7 161 32.3
Lalb_Chr01g0010021 Lupinus albus HOM05D007935 ORTHO05D007393 3.3e-07 59.3 168 29.2
TWI79G1017 Tripterygium wilfordii HOM05D009958 ORTHO05D007393 3.3e-07 59.3 166 33.7
CSS0018652 Camellia sinensis var. sinensis HOM05D007935 ORTHO05D007393 4.3e-07 58.9 172 33.1
AUR62004654 Chenopodium quinoa HOM05D007935 ORTHO05D007393 4.3e-07 58.9 178 32.6
Lj4P515T30 Lonicera japonica HOM05D007935 ORTHO05D007393 4.3e-07 58.9 129 38.0
arahy.Tifrunner.gnm1.ann1.QZIQ5C Arachis hypogaea HOM05D007935 ORTHO05D007393 5.6e-07 58.5 163 33.1
THA.LOC104810516 Tarenaya hassleriana HOM05D010479 ORTHO05D007393 5.6e-07 58.5 167 31.7
Atru.chr13.1798 Acer truncatum HOM05D007935 ORTHO05D007393 7.3e-07 58.2 186 30.6
Lj4P507T35 Lonicera japonica HOM05D007935 ORTHO05D007393 1.2e-06 57.4 129 37.2
SalBow7G1894 Salvia bowleyana HOM05D007935 ORTHO05D007393 1.6e-06 57.0 164 29.9
HPP92_009280 Vanilla planifolia HOM05D009958 ORTHO05D007393 1.6e-06 57.0 167 32.3
Medtr1g096290 Medicago truncatula HOM05D007935 ORTHO05D007393 2.1e-06 56.6 169 27.2
MELO3C008117.2 Cucumis melo HOM05D030816 ORTHO05D028878 2.8e-06 56.2 164 32.3
CsaV3_2G033460 Cucumis sativus L. HOM05D030816 ORTHO05D028878 2.8e-06 56.2 164 32.9
Psat6g186560 Pisum sativum HOM05D007935 ORTHO05D007393 2.8e-06 56.2 162 32.7


User provided reference genes

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