Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 1.4e-93 346.3 178 100.0
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.8e-55 218.0 178 65.7
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 1.5e-50 203.4 178 64.0
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 2.0e-47 193.0 178 62.4
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.7e-46 189.9 178 61.8
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 2.7e-44 182.6 178 57.9
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 6.0e-44 181.4 177 60.5
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 6.0e-44 181.4 171 60.2
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.3e-43 180.3 182 57.1
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.0e-43 179.1 178 57.3
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 6.7e-43 177.9 179 56.4
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 1.9e-42 176.4 182 56.0
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 7.4e-42 174.5 178 57.9
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 7.4e-42 174.5 181 60.2
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 7.4e-42 174.5 182 54.9
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.8e-41 172.6 179 59.8
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 3.7e-41 172.2 178 58.4
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.1e-40 170.6 178 55.6
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.1e-40 170.6 178 58.4
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.4e-40 170.2 178 57.9
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.5e-39 166.8 178 57.9
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.5e-39 165.2 177 57.1
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.5e-39 165.2 177 57.1
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 4.5e-39 165.2 179 57.5
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.3e-38 163.7 177 57.6
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 2.9e-38 162.5 178 53.9
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 3.8e-38 162.2 189 57.1
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 6.5e-38 161.4 179 53.1
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 6.5e-38 161.4 179 53.1
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 4.2e-37 158.7 163 56.4
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 5.5e-37 158.3 180 56.1
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 7.1e-37 157.9 178 53.9
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 1.2e-36 157.1 178 52.2
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 2.1e-36 156.4 164 57.3
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 3.5e-36 155.6 180 58.9
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.6e-36 155.2 157 59.2
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 4.6e-36 155.2 181 56.4
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 4.6e-36 155.2 178 52.2
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 6.0e-36 154.8 178 52.2
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 7.9e-36 154.5 164 56.7
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 7.9e-36 154.5 180 58.3
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 3.0e-35 152.5 183 52.5
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 5.1e-35 151.8 178 52.8
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 1.5e-34 150.2 174 54.6
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 2.5e-34 149.4 183 51.9
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 4.3e-34 148.7 189 52.9
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 5.7e-34 148.3 178 53.4
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 9.7e-34 147.5 137 66.4
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 2.2e-33 146.4 179 54.7
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 4.8e-33 145.2 180 53.3
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 8.2e-33 144.4 178 51.1
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 8.2e-33 144.4 127 67.7
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 1.4e-32 143.7 121 71.1
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 2.4e-32 142.9 94 80.9
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 2.4e-32 142.9 121 69.4
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.4e-32 142.9 178 51.7
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 3.1e-32 142.5 119 68.9
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 5.3e-32 141.7 180 52.2
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 2.0e-31 139.8 137 64.2
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 3.4e-31 139.0 160 57.5
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 4.5e-31 138.7 179 52.5
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 4.5e-31 138.7 168 51.2
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 5.9e-31 138.3 94 78.7
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 5.9e-31 138.3 136 61.8
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 7.6e-31 137.9 178 50.6
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 7.6e-31 137.9 138 60.1
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.0e-30 137.5 179 52.0
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 1.3e-30 137.1 131 63.4
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 1.7e-30 136.7 178 49.4
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 2.2e-30 136.3 103 73.8
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.9e-30 136.0 152 53.9
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 3.8e-30 135.6 104 72.1
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 6.5e-30 134.8 180 51.7
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 6.5e-30 134.8 105 72.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 6.5e-30 134.8 130 61.5
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.5e-30 134.8 130 61.5
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 6.5e-30 134.8 183 52.5
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 8.5e-30 134.4 137 59.1
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 1.4e-29 133.7 172 48.3
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.9e-29 133.3 178 47.8
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 1.9e-29 133.3 86 83.7
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 3.2e-29 132.5 121 58.7
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.2e-29 131.3 130 60.8
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 7.2e-29 131.3 130 60.8
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 9.3e-29 131.0 184 52.7
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.2e-28 130.6 132 59.8
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 1.2e-28 130.6 121 62.8
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 2.7e-28 129.4 102 70.6
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 2.7e-28 129.4 159 50.9
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 4.6e-28 128.6 83 78.3
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 6.1e-28 128.3 159 54.7
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 7.9e-28 127.9 159 54.7
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 1.0e-27 127.5 124 62.9
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 1.0e-27 127.5 98 72.4
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 1.0e-27 127.5 98 72.4
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 1.0e-27 127.5 89 75.3
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 1.3e-27 127.1 97 71.1
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 1.8e-27 126.7 179 50.3
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 1.8e-27 126.7 171 51.5
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 2.3e-27 126.3 178 49.4
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 2.3e-27 126.3 178 49.4
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 2.3e-27 126.3 178 49.4
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.3e-26 122.1 178 44.4
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 4.8e-25 118.6 180 48.3
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.5e-23 113.6 119 57.1
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 5.9e-23 111.7 91 68.1
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 3.8e-22 109.0 85 65.9
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 8.5e-22 107.8 96 60.4
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 1.9e-21 106.7 65 84.6
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 7.2e-21 104.8 82 67.1
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 1.6e-20 103.6 86 64.0
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.2e-17 93.2 120 50.8
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 3.7e-17 92.4 82 58.5
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 5.0e-14 82.0 86 55.8
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 5.5e-13 78.6 62 64.5
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 5.5e-13 78.6 81 51.9
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.8e-11 73.6 83 50.6


User provided reference genes

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