Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0839 Trochodendron aralioides HOM05D002236 ORTHO05D002341 7.8e-28 126.3 60 100.0
TAR376G0644 Trochodendron aralioides HOM05D002236 ORTHO05D002341 2.5e-10 68.2 37 86.5
TAR628G1667 Trochodendron aralioides HOM05D002236 ORTHO05D002341 2.1e-09 65.1 35 82.9
Ciclev10028158m.g Citrus clementina HOM05D002236 ORTHO05D002341 6.2e-09 63.5 35 82.9
Manes.11G098100 Manihot esculenta HOM05D002236 ORTHO05D002341 6.2e-09 63.5 35 82.9
Lj5g0008266 Lotus japonicus HOM05D002236 ORTHO05D002341 5.2e-08 60.5 35 80.0
Phvul.007G017300 Phaseolus vulgaris HOM05D002236 ORTHO05D002341 5.2e-08 60.5 35 77.1
VMungo0720G2845 Vigna mungo HOM05D002236 ORTHO05D002341 6.8e-08 60.1 35 77.1
Actinidia14362 Actinidia chinensis HOM05D002236 ORTHO05D002341 8.9e-08 59.7 35 74.3
Actinidia21481 Actinidia chinensis HOM05D002236 ORTHO05D002341 8.9e-08 59.7 35 74.3
Actinidia24622 Actinidia chinensis HOM05D002236 ORTHO05D002341 8.9e-08 59.7 35 74.3
Cc09_g10380 Coffea canephora HOM05D002236 ORTHO05D002341 8.9e-08 59.7 35 80.0
TPR.G2449 Trifolium pratense HOM05D002236 ORTHO05D002341 1.2e-07 59.3 35 77.1
Lj9C401G13 Lonicera japonica HOM05D000560 ORTHO05D002341 1.5e-07 58.9 35 80.0
Haze_02091 Corylus avellana HOM05D002236 ORTHO05D002341 2.0e-07 58.5 35 74.3
Gohir.A04G132000 Gossypium hirsutum HOM05D002236 ORTHO05D002341 2.0e-07 58.5 35 82.9
Thecc.02G053900 Theobroma cacao HOM05D002236 ORTHO05D002341 2.0e-07 58.5 35 82.9
Peaxi162Scf00362g00434 Petunia axillaris HOM05D002236 ORTHO05D002341 2.6e-07 58.2 35 77.1
Cfa005296 Carpinus fangiana HOM05D002236 ORTHO05D002341 3.4e-07 57.8 33 81.8
Glyma.10G284000 Glycine max HOM05D002236 ORTHO05D002341 3.4e-07 57.8 35 74.3
Medtr1g113000 Medicago truncatula HOM05D002236 ORTHO05D002341 3.4e-07 57.8 37 70.3
Rhsim11G0194100 Rhododendron simsii HOM05D002236 ORTHO05D002341 3.4e-07 57.8 35 74.3
vmacro02295 Vaccinium macrocarpon HOM05D002236 ORTHO05D002341 3.4e-07 57.8 35 74.3
Dinv14132 Davidia involucrata HOM05D002236 ORTHO05D002341 4.4e-07 57.4 35 77.1
Eucgr.I01460 Eucalyptus grandis HOM05D002236 ORTHO05D002341 4.4e-07 57.4 37 67.6
Glyma.20G105700 Glycine max HOM05D002236 ORTHO05D002341 4.4e-07 57.4 35 74.3
Lalb_Chr02g0143541 Lupinus albus HOM05D002236 ORTHO05D002341 4.4e-07 57.4 35 74.3
Psat6g232800 Pisum sativum HOM05D002236 ORTHO05D002341 4.4e-07 57.4 35 77.1
Gohir.A01G171100 Gossypium hirsutum HOM05D002236 ORTHO05D002341 5.8e-07 57.0 35 77.1
Gohir.D12G036500 Gossypium hirsutum HOM05D002236 ORTHO05D002341 5.8e-07 57.0 35 80.0
Gorai.008G037700 Gossypium raimondii HOM05D002236 ORTHO05D002341 5.8e-07 57.0 35 80.0
PGR042G3186 Punica granatum HOM05D002236 ORTHO05D002341 5.8e-07 57.0 35 74.3
EL10Ac9g21330 Beta vulgaris HOM05D002236 ORTHO05D002341 7.6e-07 56.6 35 74.3
AUR62010003 Chenopodium quinoa HOM05D002236 ORTHO05D002341 7.6e-07 56.6 35 74.3
AUR62012991 Chenopodium quinoa HOM05D002236 ORTHO05D002341 7.6e-07 56.6 35 74.3
Ca_03292_v3 Cicer arietinum L. HOM05D002236 ORTHO05D002341 7.6e-07 56.6 35 77.1
COL.COLO4_36721 Corchorus olitorius HOM05D002236 ORTHO05D002341 7.6e-07 56.6 35 80.0
Cpa.g.sc20.122 Carica papaya HOM05D002236 ORTHO05D002341 9.9e-07 56.2 35 74.3
Sc18g0006220 Simmondsia chinensis HOM05D002236 ORTHO05D002341 9.9e-07 56.2 35 74.3
Gohir.D04G168600 Gossypium hirsutum HOM05D002236 ORTHO05D002341 1.7e-06 55.5 35 77.1
Gorai.012G156900 Gossypium raimondii HOM05D002236 ORTHO05D002341 1.7e-06 55.5 35 77.1
Lsat_1_v5_gn_3_47500 Lactuca sativa HOM05D002236 ORTHO05D002341 1.7e-06 55.5 35 74.3
TWI75G0200 Tripterygium wilfordii HOM05D002236 ORTHO05D002341 2.2e-06 55.1 35 74.3
GSVIVG01023967001 Vitis vinifera HOM05D002236 ORTHO05D002341 2.2e-06 55.1 35 74.3
CSS0007742 Camellia sinensis var. sinensis HOM05D002236 ORTHO05D002341 2.9e-06 54.7 35 71.4
Nitab4.5_0004557g0060 Nicotiana tabacum HOM05D002236 ORTHO05D002341 2.9e-06 54.7 35 74.3
Oeu029653.1 Olea europaea HOM05D002236 ORTHO05D002341 2.9e-06 54.7 35 68.6
RcHm_v2.0_Chr6g0279071 Rosa chinensis HOM05D002236 ORTHO05D002341 2.9e-06 54.7 35 68.6
Sopen01g053900 Solanum pennellii HOM05D002236 ORTHO05D002341 2.9e-06 54.7 35 74.3
Gohir.A03G206300 Gossypium hirsutum HOM05D002236 ORTHO05D002341 3.7e-06 54.3 37 73.0
Gohir.A12G036100 Gossypium hirsutum HOM05D002236 ORTHO05D002341 3.7e-06 54.3 35 77.1
CiPaw.06G119800 Carya illinoinensis HOM05D002236 ORTHO05D002341 4.9e-06 53.9 33 75.8
Duzib052G0063 Durio zibethinus HOM05D002236 ORTHO05D002341 4.9e-06 53.9 35 77.1
Manes.04G070200 Manihot esculenta HOM05D002236 ORTHO05D002341 4.9e-06 53.9 35 77.1
Nn6g31894 Nelumbo nucifera HOM05D002236 ORTHO05D002341 4.9e-06 53.9 35 71.4
Nitab4.5_0004867g0110 Nicotiana tabacum HOM05D002236 ORTHO05D002341 6.4e-06 53.5 35 71.4
DCAR_022422 Daucus carota HOM05D002236 ORTHO05D002341 8.4e-06 53.1 35 68.6


User provided reference genes

Program Settings