Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 0.0e+00 1473.0 755 100.0
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 2.0e-141 507.3 803 41.8
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 3.6e-130 469.9 877 38.3
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 6.6e-124 449.1 805 39.9
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 2.5e-123 447.2 805 39.8
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 1.0e-116 425.2 824 38.6
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.5e-115 420.6 809 38.8
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 7.3e-115 419.1 316 72.5
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 5.8e-112 409.5 872 36.7
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 2.7e-101 374.0 877 35.1
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 4.6e-101 373.2 971 32.7
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 1.4e-97 361.7 785 36.6
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 1.3e-95 355.1 843 34.4
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 1.2e-93 348.6 837 34.4
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 5.1e-92 343.2 880 34.4
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.1e-86 325.5 818 33.5
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 4.2e-86 323.6 924 31.3
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 3.9e-84 317.0 788 33.9
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 1.5e-83 315.1 929 32.5
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 5.3e-81 306.6 813 32.7
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 2.6e-80 304.3 983 29.4
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 3.4e-80 303.9 806 32.0
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.2e-79 301.2 892 30.9
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.4e-78 298.5 793 32.7
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 7.1e-78 296.2 199 76.4
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 3.5e-77 293.9 897 30.8
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 7.9e-77 292.7 794 31.7
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.8e-76 291.6 787 34.2
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 8.7e-76 289.3 1062 29.1
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 5.6e-75 286.6 724 33.3
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 2.8e-74 284.3 805 33.0
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 1.1e-73 282.3 797 32.1
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 6.9e-73 279.6 809 30.2
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-72 278.5 845 32.7
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 2.6e-72 277.7 1117 28.3
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 5.8e-72 276.6 1057 28.9
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.3e-71 275.4 1009 27.8
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 9.3e-70 269.2 949 28.5
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 1.6e-69 268.5 791 30.7
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 1.6e-69 268.5 786 31.9
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 7.9e-69 266.2 786 31.8
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 1.8e-68 265.0 816 32.2
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.5e-67 261.9 779 30.9
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 1.9e-67 261.5 784 31.6
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 5.7e-67 260.0 768 30.7
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 1.6e-66 258.5 795 29.7
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 4.8e-66 256.9 781 31.2
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 1.4e-65 255.4 278 53.6
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 1.2e-64 252.3 792 32.2
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.2e-64 252.3 705 32.6
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 6.5e-63 246.5 835 29.3
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.5e-62 244.6 734 31.7
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 9.4e-62 242.7 705 32.2
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.2e-61 242.3 1023 28.0
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 6.1e-61 240.0 780 30.8
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 1.8e-60 238.4 817 30.2
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 6.7e-60 236.5 813 30.0
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 3.3e-59 234.2 894 29.2
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 2.2e-58 231.5 779 29.9
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.4e-57 228.8 825 28.7
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 2.0e-56 224.9 845 29.7
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 3.4e-56 224.2 1012 26.6
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.3e-55 222.2 186 63.4
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 8.8e-52 209.5 763 30.8
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 4.8e-50 203.8 181 59.7
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 4.8e-50 203.8 768 28.9
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 8.2e-50 203.0 798 28.1
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 1.4e-49 202.2 829 27.7
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 7.0e-49 199.9 750 29.1
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 4.5e-48 197.2 799 28.5
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 1.7e-47 195.3 811 28.9
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 3.8e-47 194.1 787 27.8
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 6.5e-47 193.4 812 28.0
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 1.9e-46 191.8 686 30.5
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 4.2e-46 190.7 867 28.4
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 4.2e-46 190.7 910 27.9
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 5.5e-46 190.3 184 56.5
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 7.2e-46 189.9 954 28.5
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 8.0e-45 186.4 840 26.7
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 5.2e-44 183.7 886 26.4
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 2.6e-43 181.4 881 28.1
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 9.7e-43 179.5 780 26.5
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 9.7e-43 179.5 802 27.1
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 3.7e-42 177.6 778 27.8
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.1e-41 174.5 930 25.6
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.1e-38 166.0 269 40.1
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 1.9e-38 165.2 287 39.4
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 4.2e-38 164.1 269 38.7
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 4.2e-38 164.1 298 39.9
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 7.2e-38 163.3 151 61.6
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 2.1e-37 161.8 236 45.3
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 6.1e-37 160.2 787 26.6
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 8.0e-37 159.8 845 24.9
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.4e-36 159.1 927 27.1
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 1.4e-36 159.1 902 26.7
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 1.4e-36 159.1 281 40.9
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.5e-35 155.6 484 30.6
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 4.4e-35 154.1 238 41.6
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 4.4e-35 154.1 780 26.3
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 4.4e-35 154.1 276 41.7
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 7.5e-35 153.3 484 30.4
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 4.8e-34 150.6 771 25.8
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 2.9e-31 141.4 836 24.2
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 2.9e-31 141.4 836 24.2
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 6.5e-31 140.2 837 23.5
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 7.2e-30 136.7 294 33.3
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 1.2e-29 136.0 195 41.5
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.6e-29 135.6 826 24.6
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.6e-29 135.6 826 24.6
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 8.0e-29 133.3 298 34.9
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 3.0e-28 131.3 166 51.2
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 3.0e-28 131.3 134 52.2
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 5.7e-27 127.1 852 23.9
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.1e-25 122.9 266 34.6
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 4.5e-24 117.5 243 33.3
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 1.0e-20 106.3 236 37.7
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 6.8e-20 103.6 245 33.9
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 3.1e-17 94.7 856 24.1
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 2.9e-15 88.2 155 36.8
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 1.8e-12 79.0 149 37.6
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 5.2e-12 77.4 164 31.7
Sabra02G0199400 Salix brachista HOM05D005945 ORTHO05D006749 6.8e-12 77.0 82 56.1
Mapoly0005s0138 Marchantia polymorpha HOM05D036654 ORTHO05D006749 8.3e-10 70.1 248 27.8
Lj4P42T20 Lonicera japonica HOM05D005945 ORTHO05D006749 7.8e-08 63.5 377 25.2
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 1.3e-07 62.8 118 33.1


User provided reference genes

Program Settings