Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.8e-81 305.8 154 100.0
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 1.6e-32 143.3 98 73.5
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 1.0e-31 140.6 102 71.6
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 9.6e-30 134.0 101 66.3
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 4.7e-29 131.7 98 67.3
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 1.3e-26 123.6 98 61.2
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 3.8e-26 122.1 87 70.1
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 1.1e-25 120.6 126 54.0
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 2.4e-25 119.4 83 68.7
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.2e-24 117.1 97 60.8
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 7.8e-24 114.4 112 53.6
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 1.0e-23 114.0 95 60.0
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.0e-23 114.0 99 62.6
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.3e-23 113.6 99 61.6
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 1.3e-23 113.6 99 62.6
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 1.7e-23 113.2 136 50.7
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 2.3e-23 112.8 109 54.1
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.0e-23 112.5 98 62.2
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 6.6e-23 111.3 128 52.3
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 1.1e-22 110.5 136 50.7
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 1.5e-22 110.2 132 49.2
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 1.9e-22 109.8 100 60.0
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 1.9e-22 109.8 136 47.8
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 9.6e-22 107.5 99 54.5
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 1.3e-21 107.1 83 66.3
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 1.6e-21 106.7 91 65.9
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 2.1e-21 106.3 85 64.7
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 2.1e-21 106.3 85 64.7
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 2.1e-21 106.3 136 47.8
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 3.6e-21 105.5 91 64.8
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 3.6e-21 105.5 112 58.0
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 6.2e-21 104.8 99 56.6
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 8.1e-21 104.4 127 50.4
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.1e-20 104.0 75 73.3
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 1.1e-20 104.0 136 49.3
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 1.8e-20 103.2 100 61.0
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.8e-20 103.2 83 65.1
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 1.8e-20 103.2 85 62.4
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 2.4e-20 102.8 136 49.3
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 2.4e-20 102.8 98 55.1
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 3.1e-20 102.4 112 55.4
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 3.1e-20 102.4 106 50.0
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 3.1e-20 102.4 99 53.5
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 5.3e-20 101.7 136 47.8
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 5.3e-20 101.7 72 73.6
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 5.3e-20 101.7 106 49.1
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 6.9e-20 101.3 88 61.4
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 6.9e-20 101.3 136 47.8
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 1.2e-19 100.5 114 51.8
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.5e-19 100.1 98 53.1
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.5e-19 100.1 111 55.9
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 2.0e-19 99.8 136 47.1
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 2.0e-19 99.8 136 47.1
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 2.6e-19 99.4 98 52.0
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 5.8e-19 98.2 136 44.9
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 7.6e-19 97.8 76 67.1
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 9.9e-19 97.4 79 63.3
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.7e-18 96.7 136 45.6
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.8e-18 95.5 117 52.1
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 3.8e-18 95.5 136 45.6
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 4.9e-18 95.1 98 53.1
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 4.9e-18 95.1 87 60.9
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 4.9e-18 95.1 98 54.1
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 6.4e-18 94.7 99 57.6
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 6.4e-18 94.7 91 54.9
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 1.1e-17 94.0 76 65.8
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.4e-17 93.6 113 51.3
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 1.4e-17 93.6 114 50.9
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 1.4e-17 93.6 136 45.6
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.4e-17 92.8 94 54.3
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 2.4e-17 92.8 90 56.7
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 7.1e-17 91.3 80 58.8
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 7.1e-17 91.3 84 57.1
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 1.2e-16 90.5 64 71.9
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 1.6e-16 90.1 90 58.9
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 2.1e-16 89.7 78 62.8
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 2.7e-16 89.4 115 47.8
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 2.7e-16 89.4 88 52.3
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 4.6e-16 88.6 136 44.9
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 4.6e-16 88.6 60 71.7
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 6.0e-16 88.2 109 48.6
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 6.0e-16 88.2 79 54.4
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 6.0e-16 88.2 134 41.8
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 7.9e-16 87.8 107 51.4
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 1.0e-15 87.4 90 53.3
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 1.0e-15 87.4 89 56.2
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.7e-15 86.7 116 47.4
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 6.6e-15 84.7 55 76.4
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 6.6e-15 84.7 110 47.3
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 8.7e-15 84.3 89 52.8
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 8.7e-15 84.3 98 54.1
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 1.5e-14 83.6 60 68.3
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 1.9e-14 83.2 92 52.2
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 1.9e-14 83.2 51 76.5
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 2.5e-14 82.8 133 43.6
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 3.3e-14 82.4 113 47.8
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 5.6e-14 81.6 90 55.6
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 9.6e-14 80.9 136 46.3
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 9.6e-14 80.9 135 46.7
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 1.3e-13 80.5 112 47.3
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.1e-13 79.7 64 64.1
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 4.8e-13 78.6 117 47.9
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 2.4e-12 76.3 79 55.7
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 2.4e-12 76.3 79 55.7
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 9.0e-12 74.3 118 44.9
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 9.0e-12 74.3 118 44.9
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.2e-11 73.9 80 52.5
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 9.3e-09 64.3 70 47.1
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 1.6e-08 63.5 51 52.9
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 5.1e-07 58.5 34 79.4
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 5.1e-07 58.5 72 47.2
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.5e-06 57.0 65 43.1
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 3.3e-06 55.8 52 51.9
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 9.6e-06 54.3 49 53.1


User provided reference genes

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