Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0786 Trochodendron aralioides HOM05D000120 ORTHO05D009410 3.5e-135 485.0 241 100.0
TAR628G1238 Trochodendron aralioides HOM05D000120 ORTHO05D009410 2.8e-68 262.7 243 60.5
PSO210G7327 Papaver somniferum HOM05D000120 ORTHO05D009410 1.5e-42 177.2 244 42.6
Dinv23458 Davidia involucrata HOM05D000120 ORTHO05D009410 3.4e-42 176.0 243 46.9
Nn7g36692 Nelumbo nucifera HOM05D000120 ORTHO05D009410 5.5e-40 168.7 285 40.0
Manes.11G082300 Manihot esculenta HOM05D000120 ORTHO05D009410 5.7e-37 158.7 249 39.0
GSVIVG01024178001 Vitis vinifera HOM05D000120 ORTHO05D009410 1.6e-36 157.1 241 40.7
Duzib248G0587 Durio zibethinus HOM05D000120 ORTHO05D009410 2.8e-36 156.4 251 40.6
Manes.04G083900 Manihot esculenta HOM05D000120 ORTHO05D009410 5.3e-35 152.1 249 38.2
Thecc.02G075700 Theobroma cacao HOM05D000120 ORTHO05D009410 1.2e-34 151.0 254 39.8
vmacro02052 Vaccinium macrocarpon HOM05D000120 ORTHO05D009410 2.6e-34 149.8 242 43.0
Cfa005100 Carpinus fangiana HOM05D000722 ORTHO05D000590 3.4e-34 149.4 231 44.2
Haze_02260 Corylus avellana HOM05D000120 ORTHO05D009410 3.4e-34 149.4 243 41.6
Potri.009G124000 Populus trichocarpa HOM05D000120 ORTHO05D009410 5.9e-34 148.7 250 40.0
Potri.004G162300 Populus trichocarpa HOM05D000120 ORTHO05D009410 1.3e-33 147.5 246 40.2
Sabra09G0095200 Salix brachista HOM05D000120 ORTHO05D009410 1.7e-33 147.1 250 40.8
TWI79G0897 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 1.7e-33 147.1 229 41.0
TWI31G0702 Tripterygium wilfordii HOM05D000120 ORTHO05D009410 8.5e-33 144.8 226 41.2
Actinidia02243 Actinidia chinensis HOM05D000120 ORTHO05D009410 1.1e-32 144.4 217 43.3
MD10G1063700 Malus domestica HOM05D000120 ORTHO05D009410 4.2e-32 142.5 243 38.7
RcHm_v2.0_Chr6g0267851 Rosa chinensis HOM05D000120 ORTHO05D009410 1.2e-31 141.0 243 38.3
FvH4_2g10380 Fragaria vesca HOM05D000120 ORTHO05D009410 3.6e-31 139.4 243 37.4
Ciclev10029808m.g Citrus clementina HOM05D000120 ORTHO05D009410 4.6e-31 139.0 255 40.4
MD00G1040100 Malus domestica HOM05D000120 ORTHO05D009410 4.6e-31 139.0 244 38.9
FAN20G2164 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.9e-31 138.3 243 37.0
FAN24G2037 Fragaria x ananassa HOM05D000120 ORTHO05D009410 1.8e-30 137.1 243 37.0
Prupe.8G085200 Prunus persica HOM05D000120 ORTHO05D009410 3.9e-30 136.0 242 38.8
Duzib132G0615 Durio zibethinus HOM05D000120 ORTHO05D009410 7.4e-29 131.7 257 36.6
Lalb_Chr03g0030591 Lupinus albus HOM05D000120 ORTHO05D009410 7.4e-29 131.7 231 39.4
Aqoxy5G01485 Aquilegia oxysepala HOM05D000120 ORTHO05D009410 1.3e-28 131.0 245 38.4
Ca_27169_v3 Cicer arietinum L. HOM05D000120 ORTHO05D009410 1.3e-28 131.0 238 38.2
COL.COLO4_26040 Corchorus olitorius HOM05D000120 ORTHO05D009410 1.7e-28 130.6 248 37.1
Eucgr.G01727 Eucalyptus grandis HOM05D000120 ORTHO05D009410 4.1e-27 125.9 241 34.0
Hma1.2p1_1244F.1_g270010 Hydrangea macrophylla HOM05D000120 ORTHO05D009410 5.3e-27 125.6 249 37.3
Lj3g0001494 Lotus japonicus HOM05D000120 ORTHO05D009410 3.4e-26 122.9 253 36.8
PSO170G1560 Papaver somniferum HOM05D000120 ORTHO05D009410 1.3e-25 120.9 178 39.3
Duzib052G0028 Durio zibethinus HOM05D000120 ORTHO05D009410 1.7e-25 120.6 249 37.8
Oeu055633.1 Olea europaea HOM05D000120 ORTHO05D009410 2.9e-25 119.8 243 36.6
MSTRG.5421 Avicennia marina HOM05D000120 ORTHO05D009410 2.5e-24 116.7 222 36.5
Atru.chr5.3139 Acer truncatum HOM05D000120 ORTHO05D009410 5.5e-24 115.5 237 36.3
CiPaw.06G128400 Carya illinoinensis HOM05D000120 ORTHO05D009410 7.2e-24 115.2 225 38.2
FAN27G2529 Fragaria x ananassa HOM05D000120 ORTHO05D009410 7.2e-24 115.2 206 35.9
QL11p046369 Quercus lobata HOM05D000120 ORTHO05D009410 1.2e-23 114.4 370 29.5
Gohir.A12G041200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 1.6e-23 114.0 203 37.4
AUR62010396 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.0e-22 111.3 242 36.4
AUR62016822 Chenopodium quinoa HOM05D000120 ORTHO05D009410 1.0e-22 111.3 242 36.0
TPR.G31517 Trifolium pratense HOM05D000120 ORTHO05D009410 3.0e-22 109.8 242 36.8
CANSAT11G1664 Cannabis sativa HOM05D000120 ORTHO05D009410 3.9e-22 109.4 230 35.2
CsaV3_7G000360 Cucumis sativus L. HOM05D000120 ORTHO05D009410 8.8e-22 108.2 244 34.0
arahy.Tifrunner.gnm1.ann1.X3J0BR Arachis hypogaea HOM05D000120 ORTHO05D009410 2.6e-21 106.7 229 33.6
Glyma.06G246300 Glycine max HOM05D000120 ORTHO05D009410 3.3e-21 106.3 266 37.2
Gorai.008G031900 Gossypium raimondii HOM05D000120 ORTHO05D009410 3.3e-21 106.3 335 28.1
Gohir.D12G031200 Gossypium hirsutum HOM05D000120 ORTHO05D009410 4.4e-21 105.9 201 36.3
MELO3C002789.2 Cucumis melo HOM05D000120 ORTHO05D009410 5.7e-21 105.5 243 34.2
Phvul.011G156600 Phaseolus vulgaris HOM05D000120 ORTHO05D009410 4.8e-20 102.4 231 34.6
Hund00217 Selenicereus undatus HOM05D000120 ORTHO05D000105 8.2e-20 101.7 249 30.5
PGR042G1442 Punica granatum HOM05D000120 ORTHO05D009410 1.1e-19 101.3 254 33.1
Cpa.g.sc150.20 Carica papaya HOM05D000120 ORTHO05D009410 1.4e-19 100.9 230 33.5
Nitab4.5_0017990g0010 Nicotiana tabacum HOM05D000120 ORTHO05D009410 1.4e-19 100.9 244 34.8
VMungo1127G0720 Vigna mungo HOM05D000120 ORTHO05D009410 2.4e-19 100.1 237 34.2
Sed0018675 Sechium edule HOM05D000120 ORTHO05D009410 3.1e-19 99.8 282 29.8
PGSC0003DMG400046163 Solanum tuberosum HOM05D000120 ORTHO05D009410 7.0e-19 98.6 242 33.9
CAN.G170.96 Capsicum annuum HOM05D000120 ORTHO05D009410 2.0e-18 97.1 246 34.6
ClCG02G004590 Citrullus lanatus HOM05D000120 ORTHO05D009410 2.0e-18 97.1 243 34.6
Peaxi162Scf00016g10015 Petunia axillaris HOM05D000120 ORTHO05D009410 6.5e-17 92.0 232 34.9
Sopen01g052500 Solanum pennellii HOM05D000120 ORTHO05D009410 6.5e-17 92.0 247 32.8
Solyc01g110350.2 Solanum lycopersicum HOM05D000120 ORTHO05D009410 1.9e-16 90.5 248 32.3
Lsat_1_v5_gn_3_44160 Lactuca sativa HOM05D000120 ORTHO05D009410 2.7e-15 86.7 220 32.3
Sc08g0000840 Simmondsia chinensis HOM05D000120 ORTHO05D009410 1.0e-14 84.7 240 30.0
Sed0016080 Sechium edule HOM05D000120 ORTHO05D009410 6.7e-14 82.0 265 28.7
Sabra04G0109000 Salix brachista HOM05D000120 ORTHO05D009410 1.5e-13 80.9 239 31.4
HanXRQChr15g0478301 Helianthus annuus HOM05D000120 ORTHO05D009410 3.3e-13 79.7 214 30.8
SalBow6G2916 Salvia bowleyana HOM05D000120 ORTHO05D009410 3.3e-13 79.7 304 28.0
Psat4g137840 Pisum sativum HOM05D000120 ORTHO05D009410 9.7e-13 78.2 244 30.3
DCAR_022914 Daucus carota HOM05D000120 ORTHO05D009410 2.2e-12 77.0 240 27.5
Cc02_g16960 Coffea canephora HOM05D000120 ORTHO05D009410 6.3e-12 75.5 233 30.0
ECA240G4650 Erigeron canadensis HOM05D000120 ORTHO05D009410 1.1e-11 74.7 226 31.9
Os02g0469000 Oryza sativa ssp. japonica HOM05D000120 ORTHO05D009410 3.1e-11 73.2 239 28.5
SGA_v2.0_scaffold32G13221 Striga asiatica HOM05D000120 ORTHO05D009410 1.6e-10 70.9 238 29.4
unitig_747.g21207 Utricularia gibba HOM05D000120 ORTHO05D009410 3.5e-10 69.7 240 31.7
Glyma.12G151000 Glycine max HOM05D000120 ORTHO05D009410 2.5e-08 63.5 50 62.0
FAN15G0678 Fragaria x ananassa HOM05D000722 ORTHO05D000590 4.2e-08 62.8 108 37.0
BcaB03g12236 Brassica carinata HOM05D011065 ORTHO05D009410 5.5e-08 62.4 251 27.1
BcaC01g00270 Brassica carinata HOM05D011065 ORTHO05D009410 8.0e-07 58.5 256 27.3
C03p77470 Brassica napus HOM05D011065 ORTHO05D009410 8.0e-07 58.5 256 27.3
BolC3t20002H Brassica oleracea HOM05D011065 ORTHO05D009410 8.0e-07 58.5 256 27.3
Zm00001eb180650 Zea mays HOM05D000120 ORTHO05D009410 8.0e-07 58.5 238 26.1
Migut.B00178 Erythranthe guttata HOM05D000120 ORTHO05D009410 2.3e-06 57.0 213 30.0
ATR0661G359 Amborella trichopoda HOM05D000120 ORTHO05D009410 5.2e-06 55.8 237 28.3
Sp7g36860 Schrenkiella parvula HOM05D011065 ORTHO05D009410 8.8e-06 55.1 280 25.7


User provided reference genes

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