Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0668 Trochodendron aralioides HOM05D004967 ORTHO05D006146 4.2e-198 694.5 350 100.0
Haze_00459 Corylus avellana HOM05D004967 ORTHO05D006146 6.0e-64 248.8 200 63.5
Cfa016003 Carpinus fangiana HOM05D004967 ORTHO05D006146 1.3e-63 247.7 200 63.5
Dinv27328 Davidia involucrata HOM05D004967 ORTHO05D006146 2.5e-62 243.4 203 68.5
TAR625G0546 Trochodendron aralioides HOM05D004967 ORTHO05D006146 9.7e-62 241.5 197 64.0
Dinv40417 Davidia involucrata HOM05D004967 ORTHO05D006146 9.0e-60 235.0 202 60.9
CSS0022408 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 2.6e-59 233.4 201 60.7
Dinv07242 Davidia involucrata HOM05D004967 ORTHO05D006146 4.5e-59 232.6 202 59.9
Ciclev10002109m.g Citrus clementina HOM05D004967 ORTHO05D006146 5.9e-59 232.3 202 58.9
RcHm_v2.0_Chr6g0295611 Rosa chinensis HOM05D004967 ORTHO05D006146 1.0e-58 231.5 201 58.7
TWI12G0727 Tripterygium wilfordii HOM05D004967 ORTHO05D006146 1.7e-58 230.7 194 60.3
QL09p035340 Quercus lobata HOM05D004967 ORTHO05D006146 2.2e-58 230.3 192 60.9
MELO3C008775.2 Cucumis melo HOM05D004967 ORTHO05D006146 6.5e-58 228.8 196 56.6
CANSAT54G0493 Cannabis sativa HOM05D004967 ORTHO05D006146 1.1e-57 228.0 199 60.3
MD08G1165700 Malus domestica HOM05D004967 ORTHO05D006146 1.9e-57 227.3 196 58.7
GSVIVG01008885001 Vitis vinifera HOM05D004967 ORTHO05D006146 1.9e-57 227.3 200 58.0
Atru.chr13.1436 Acer truncatum HOM05D004967 ORTHO05D006146 4.2e-57 226.1 195 57.9
COL.COLO4_35945 Corchorus olitorius HOM05D004967 ORTHO05D006146 5.5e-57 225.7 201 55.7
CSS0015935 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 7.2e-57 225.3 201 60.2
CAN.G792.65 Capsicum annuum HOM05D004967 ORTHO05D006146 7.2e-57 225.3 194 58.8
MD15G1351500 Malus domestica HOM05D004967 ORTHO05D006146 7.2e-57 225.3 197 57.9
CiPaw.06G029300 Carya illinoinensis HOM05D004967 ORTHO05D006146 9.4e-57 224.9 192 59.9
CANSAT54G1838 Cannabis sativa HOM05D004967 ORTHO05D006146 2.7e-56 223.4 199 58.8
CSS0002296 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 4.6e-56 222.6 191 59.2
ClCG08G005580 Citrullus lanatus HOM05D004967 ORTHO05D006146 4.6e-56 222.6 189 57.7
CSS0011461 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 6.1e-56 222.2 191 59.2
CsaV3_2G009340 Cucumis sativus L. HOM05D004967 ORTHO05D006146 7.9e-56 221.9 196 55.6
Lj7C339G8 Lonicera japonica HOM05D004967 ORTHO05D006146 2.3e-55 220.3 189 58.2
Rhsim06G0104700 Rhododendron simsii HOM05D004967 ORTHO05D006146 2.3e-55 220.3 190 60.0
Manes.02G162100 Manihot esculenta HOM05D004967 ORTHO05D006146 3.0e-55 219.9 202 55.9
Thecc.08G123500 Theobroma cacao HOM05D004967 ORTHO05D006146 3.9e-55 219.5 201 56.2
Sed0005970 Sechium edule HOM05D004967 ORTHO05D006146 5.1e-55 219.2 189 55.0
Duzib093G0019 Durio zibethinus HOM05D004967 ORTHO05D006146 1.5e-54 217.6 195 56.9
Glyma.13G080800 Glycine max HOM05D004967 ORTHO05D006146 2.5e-54 216.9 193 58.5
Actinidia23071 Actinidia chinensis HOM05D004967 ORTHO05D006146 3.3e-54 216.5 194 66.0
Nitab4.5_0005272g0050 Nicotiana tabacum HOM05D004967 ORTHO05D006146 9.7e-54 214.9 190 63.7
FAN15G1580 Fragaria x ananassa HOM05D004967 ORTHO05D006146 1.3e-53 214.5 204 54.9
Gohir.D05G236800 Gossypium hirsutum HOM05D004967 ORTHO05D006146 1.3e-53 214.5 196 56.6
Duzib116G0335 Durio zibethinus HOM05D004967 ORTHO05D006146 1.7e-53 214.2 199 55.3
MBI06_g20715_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 1.7e-53 214.2 204 58.3
PGR042G3942 Punica granatum HOM05D004967 ORTHO05D006146 1.7e-53 214.2 201 54.2
Potri.005G176500 Populus trichocarpa HOM05D004967 ORTHO05D006146 2.8e-53 213.4 202 55.0
Gorai.009G245200 Gossypium raimondii HOM05D004967 ORTHO05D006146 3.7e-53 213.0 196 56.1
FAN24G1575 Fragaria x ananassa HOM05D004967 ORTHO05D006146 4.8e-53 212.6 201 54.7
FvH4_2g26730 Fragaria vesca HOM05D004967 ORTHO05D006146 6.3e-53 212.2 201 54.7
PGSC0003DMG400022093 Solanum tuberosum HOM05D004967 ORTHO05D006146 1.4e-52 211.1 192 62.0
Eucgr.F03780 Eucalyptus grandis HOM05D004967 ORTHO05D006146 2.4e-52 210.3 198 55.1
Nn1g08721 Nelumbo nucifera HOM05D004967 ORTHO05D006146 2.4e-52 210.3 208 61.5
Peaxi162Scf00688g00357 Petunia axillaris HOM05D004967 ORTHO05D006146 2.4e-52 210.3 190 57.4
Lj1g0018094 Lotus japonicus HOM05D004967 ORTHO05D006146 3.1e-52 209.9 191 55.5
Gohir.D01G181000 Gossypium hirsutum HOM05D004967 ORTHO05D006146 5.3e-52 209.1 191 56.5
Gorai.002G221500 Gossypium raimondii HOM05D004967 ORTHO05D006146 5.3e-52 209.1 191 56.5
Solyc11g030390.2 Solanum lycopersicum HOM05D004967 ORTHO05D006146 9.1e-52 208.4 192 54.7
Solyc11g030380.2 Solanum lycopersicum HOM05D004967 ORTHO05D006146 1.2e-51 208.0 192 54.2
Nitab4.5_0007033g0030 Nicotiana tabacum HOM05D004967 ORTHO05D006146 1.5e-51 207.6 215 56.3
Sc23g0000730 Simmondsia chinensis HOM05D004967 ORTHO05D006146 2.0e-51 207.2 201 54.7
Gohir.A05G234500 Gossypium hirsutum HOM05D004967 ORTHO05D006146 2.6e-51 206.8 196 54.6
Eucgr.L02366 Eucalyptus grandis HOM05D004967 ORTHO05D006146 4.5e-51 206.1 204 52.9
Sabra02G0066300 Salix brachista HOM05D004967 ORTHO05D006146 4.5e-51 206.1 202 52.0
Gohir.A01G188500 Gossypium hirsutum HOM05D004967 ORTHO05D006146 7.7e-51 205.3 191 57.6
Sabra05G0133100 Salix brachista HOM05D004967 ORTHO05D006146 1.3e-50 204.5 195 53.8
Phvul.008G163800 Phaseolus vulgaris HOM05D004967 ORTHO05D006146 1.7e-50 204.1 193 54.9
Psat6g042000 Pisum sativum HOM05D004967 ORTHO05D006146 2.2e-50 203.8 193 55.4
Sopen11g013380 Solanum pennellii HOM05D004967 ORTHO05D006146 2.9e-50 203.4 196 53.1
Lalb_Chr04g0253391 Lupinus albus HOM05D004967 ORTHO05D006146 5.0e-50 202.6 190 55.3
Sopen11g013330 Solanum pennellii HOM05D004967 ORTHO05D006146 6.5e-50 202.2 194 53.6
Oeu050911.2 Olea europaea HOM05D004967 ORTHO05D006146 1.9e-49 200.7 205 51.2
AL1G52430 Arabidopsis lyrata HOM05D004967 ORTHO05D006146 2.5e-49 200.3 195 51.8
AT1G44770 Arabidopsis thaliana HOM05D004967 ORTHO05D006146 3.2e-49 199.9 195 51.3
Aa31LG6G9260 Aethionema arabicum HOM05D004967 ORTHO05D006146 4.2e-49 199.5 196 50.5
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 4.2e-49 199.5 196 51.5
MSTRG.22413 Avicennia marina HOM05D004967 ORTHO05D006146 7.2e-49 198.7 190 53.7
Ca_12612_v3 Cicer arietinum L. HOM05D004967 ORTHO05D006146 7.2e-49 198.7 191 53.9
Hund16853 Selenicereus undatus HOM05D004967 ORTHO05D006146 9.4e-49 198.4 213 50.7
BcaC08g42866 Brassica carinata HOM05D004967 ORTHO05D006146 1.2e-48 198.0 199 51.8
C06p00760 Brassica napus HOM05D004967 ORTHO05D006146 1.2e-48 198.0 199 51.8
BolC6t35218H Brassica oleracea HOM05D004967 ORTHO05D006146 1.2e-48 198.0 199 51.8
CARHR036020 Cardamine hirsuta HOM05D004967 ORTHO05D006146 1.2e-48 198.0 197 52.3
TAR625G0133 Trochodendron aralioides HOM05D004967 ORTHO05D006146 1.2e-48 198.0 196 54.6
Potri.002G084900 Populus trichocarpa HOM05D004967 ORTHO05D006146 1.6e-48 197.6 202 50.5
THA.LOC104806820 Tarenaya hassleriana HOM05D004967 ORTHO05D006146 2.1e-48 197.2 199 49.7
Aa31LG9G14250 Aethionema arabicum HOM05D004967 ORTHO05D006146 2.7e-48 196.8 194 51.0
SalBow6G6278 Salvia bowleyana HOM05D004967 ORTHO05D006146 3.6e-48 196.4 194 52.6
Oeu017287.2 Olea europaea HOM05D004967 ORTHO05D006146 4.7e-48 196.1 187 53.5
Sp1g33630 Schrenkiella parvula HOM05D004967 ORTHO05D006146 4.7e-48 196.1 197 51.3
A10p07360 Brassica napus HOM05D004967 ORTHO05D006146 7.9e-48 195.3 199 49.7
BraSC36t46077Z Brassica rapa HOM05D004967 ORTHO05D006146 7.9e-48 195.3 199 49.7
Thhalv10011651m.g Eutrema salsugineum HOM05D004967 ORTHO05D006146 7.9e-48 195.3 195 50.3
arahy.Tifrunner.gnm1.ann1.W41MX0 Arachis hypogaea HOM05D004967 ORTHO05D006146 1.0e-47 194.9 196 52.6
Ah.05g170880 Amaranthus hybridus HOM05D004967 ORTHO05D006146 1.4e-47 194.5 192 49.5
Lalb_Chr10g0101781 Lupinus albus HOM05D004967 ORTHO05D006146 1.4e-47 194.5 193 53.9
Carub.0001s3529 Capsella rubella HOM05D004967 ORTHO05D006146 1.8e-47 194.1 196 50.5
BcaB07g33933 Brassica carinata HOM05D004967 ORTHO05D006146 2.3e-47 193.7 200 50.5
Glyma.14G148500 Glycine max HOM05D004967 ORTHO05D006146 2.3e-47 193.7 193 54.4
Medtr1g030420 Medicago truncatula HOM05D004967 ORTHO05D006146 3.0e-47 193.4 200 50.5
arahy.Tifrunner.gnm1.ann1.T53UMC Arachis hypogaea HOM05D004967 ORTHO05D006146 5.1e-47 192.6 196 51.5
EL10Ac1g01046 Beta vulgaris HOM05D004967 ORTHO05D006146 6.7e-47 192.2 187 51.9
AUR62027891 Chenopodium quinoa HOM05D004967 ORTHO05D006146 6.7e-47 192.2 197 49.2
DCAR_017414 Daucus carota HOM05D004967 ORTHO05D006146 1.1e-46 191.4 190 53.2
Cc00_g04290 Coffea canephora HOM05D004967 ORTHO05D006146 3.3e-46 189.9 201 58.2
vmacro12539 Vaccinium macrocarpon HOM05D004967 ORTHO05D006146 9.7e-46 188.3 248 50.8
Aqoxy6G00188 Aquilegia oxysepala HOM05D004967 ORTHO05D006146 1.3e-45 188.0 193 51.3
THA.LOC104817267 Tarenaya hassleriana HOM05D004967 ORTHO05D006146 6.3e-45 185.7 194 49.0
Hund27025 Selenicereus undatus HOM05D004967 ORTHO05D006146 1.8e-44 184.1 195 49.2
AUR62019051 Chenopodium quinoa HOM05D004967 ORTHO05D006146 2.6e-43 180.3 227 44.1
Cpa.g.sc36.53 Carica papaya HOM05D004967 ORTHO05D006146 7.7e-43 178.7 189 48.7
SGA_v2.0_scaffold28G12004 Striga asiatica HOM05D004967 ORTHO05D006146 6.5e-42 175.6 192 49.5
Lsat_1_v5_gn_2_72221 Lactuca sativa HOM05D004967 ORTHO05D006146 8.5e-42 175.3 202 46.0
DCAR_003730 Daucus carota HOM05D004967 ORTHO05D006146 1.1e-41 174.9 191 48.2
Migut.N03288 Erythranthe guttata HOM05D004967 ORTHO05D006146 1.9e-41 174.1 204 47.5
TPR.G25780 Trifolium pratense HOM05D004967 ORTHO05D006146 2.5e-41 173.7 163 53.4
PSO782G2864 Papaver somniferum HOM05D004967 ORTHO05D006146 7.2e-41 172.2 205 49.8
MSTRG.1454 Avicennia marina HOM05D004967 ORTHO05D006146 1.2e-40 171.4 195 48.2
QL09p037225 Quercus lobata HOM05D004967 ORTHO05D006146 2.0e-38 164.1 154 57.8
SGA_v2.0_scaffold25G11115 Striga asiatica HOM05D004967 ORTHO05D006146 6.3e-37 159.1 196 46.4
ECA238G0202 Erigeron canadensis HOM05D004967 ORTHO05D006146 1.4e-36 157.9 190 43.7
PSO170G5727 Papaver somniferum HOM05D004967 ORTHO05D006146 2.6e-35 153.7 207 46.9
HanXRQChr14g0444041 Helianthus annuus HOM05D004967 ORTHO05D006146 6.5e-34 149.1 203 49.3
unitig_22.g6736 Utricularia gibba HOM05D001808 ORTHO05D001747 9.4e-33 145.2 190 41.1
ATR0104G008 Amborella trichopoda HOM05D004967 ORTHO05D006146 4.7e-32 142.9 190 46.3
Lalb_Chr00c21g0406251 Lupinus albus HOM05D004967 ORTHO05D006146 8.8e-31 138.7 109 61.5
HPP92_011156 Vanilla planifolia HOM05D004967 ORTHO05D006146 2.4e-28 130.6 231 37.2
SEGI_02584 Sequoiadendron giganteum HOM05D004967 ORTHO05D006146 2.2e-26 124.0 202 36.1
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 3.2e-25 120.2 140 47.9
Os03g0701600 Oryza sativa ssp. japonica HOM05D004967 ORTHO05D006146 5.5e-25 119.4 193 36.3
MBI08_g02103_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D011152 9.4e-25 118.6 73 68.5
MBI02_g43670_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 2.7e-24 117.1 69 72.5
MBI18_g45942_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 2.7e-24 117.1 103 51.5
PSO782G2362 Papaver somniferum HOM05D004967 ORTHO05D006146 2.7e-24 117.1 186 41.9
QL09p036488 Quercus lobata HOM05D004967 ORTHO05D006146 6.1e-24 115.9 68 73.5
Zm00001eb054160 Zea mays HOM05D004967 ORTHO05D006146 2.0e-22 110.9 209 36.4
MBI12_g24277_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 1.3e-21 108.2 80 61.2
FAN27G2484 Fragaria x ananassa HOM05D004967 ORTHO05D006146 1.7e-21 107.8 126 50.8
MBI18_g40420_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 7.0e-20 102.4 109 47.7
Gorai.013G198200 Gossypium raimondii HOM05D004967 ORTHO05D006146 4.5e-19 99.8 123 47.2
Gohir.D06G124400 Gossypium hirsutum HOM05D004967 ORTHO05D006146 3.8e-18 96.7 131 51.1
SEGI_08861 Sequoiadendron giganteum HOM05D004967 ORTHO05D006146 7.2e-17 92.4 213 29.6
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 7.2e-17 92.4 56 80.4
Gorai.009G323800 Gossypium raimondii HOM05D004967 ORTHO05D006146 4.0e-15 86.7 123 46.3
MBI18_g40417_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 2.6e-14 84.0 55 63.6
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 2.2e-13 80.9 56 69.6
Mapoly0023s0096 Marchantia polymorpha HOM05D004160 ORTHO05D004757 6.3e-13 79.3 192 31.2
MBI12_g00099_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 8.3e-13 79.0 63 58.7
CBR_g13070 Chara braunii HOM05D004967 ORTHO05D006146 1.8e-12 77.8 210 31.0
Actinidia02612 Actinidia chinensis HOM05D004967 ORTHO05D004601 2.7e-11 73.9 77 50.6
Mapoly0023s0095 Marchantia polymorpha HOM05D004967 ORTHO05D004757 3.5e-11 73.6 194 29.9
Pp3c23_8360 Physcomitrium patens HOM05D004160 ORTHO05D004757 1.0e-10 72.0 199 26.1
FAN20G0116 Fragaria x ananassa HOM05D004967 ORTHO05D006146 2.3e-10 70.9 43 67.4
FAN27G1416 Fragaria x ananassa HOM05D004967 ORTHO05D006146 2.3e-10 70.9 43 67.4
arahy.Tifrunner.gnm1.ann1.UMLE7H Arachis hypogaea HOM05D004967 ORTHO05D006146 5.0e-10 69.7 125 40.8
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.9e-09 67.8 67 52.2
Thhalv10011964m.g Eutrema salsugineum HOM05D004967 ORTHO05D006146 1.9e-09 67.8 44 65.9
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.5e-09 67.4 57 56.1
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.6e-09 66.2 57 57.9
SGA_v2.0_scaffold106G30705 Striga asiatica HOM05D004967 ORTHO05D006146 4.7e-08 63.2 101 37.6
ClCG02G012910 Citrullus lanatus HOM05D001004 ORTHO05D000653 1.4e-07 61.6 56 53.6
MELO3C020883.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.4e-07 61.6 56 55.4
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 1.8e-07 61.2 56 51.8
TAR633G2777 Trochodendron aralioides HOM05D001004 ORTHO05D000653 3.1e-07 60.5 56 55.4
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.0e-07 60.1 56 55.4
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 4.0e-07 60.1 57 57.9
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.2e-07 59.7 57 52.6
A05p31090 Brassica napus HOM05D001004 ORTHO05D000653 6.8e-07 59.3 55 43.6
BraA05t21950Z Brassica rapa HOM05D001004 ORTHO05D000653 6.8e-07 59.3 55 43.6
Eucgr.H05137 Eucalyptus grandis HOM05D001004 ORTHO05D000653 6.8e-07 59.3 66 45.5
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 1.2e-06 58.5 56 51.8
Eucgr.H02107 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-06 58.5 66 45.5
SMO235G0072 Selaginella moellendorffii HOM05D004967 ORTHO05D006146 1.5e-06 58.2 133 27.8
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 2.0e-06 57.8 56 53.6
Gohir.D11G134200 Gossypium hirsutum HOM05D001004 ORTHO05D000653 2.6e-06 57.4 56 55.4
Gorai.007G143500 Gossypium raimondii HOM05D001004 ORTHO05D000653 2.6e-06 57.4 56 55.4
AUR62010425 Chenopodium quinoa HOM05D001004 ORTHO05D000653 3.4e-06 57.0 56 50.0
Gohir.A05G281850 Gossypium hirsutum HOM05D001004 ORTHO05D000653 3.4e-06 57.0 56 50.0
COL.COLO4_12160 Corchorus olitorius HOM05D001004 ORTHO05D000653 4.4e-06 56.6 66 47.0
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 4.4e-06 56.6 56 50.0
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 4.4e-06 56.6 57 56.1
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 5.8e-06 56.2 68 42.6
PSO384G3535 Papaver somniferum HOM05D001004 ORTHO05D000653 5.8e-06 56.2 65 49.2
SGA_v2.0_scaffold14G07008 Striga asiatica HOM05D000760 ORTHO05D000618 5.8e-06 56.2 55 49.1
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 7.5e-06 55.8 56 51.8
Migut.C00659 Erythranthe guttata HOM05D001004 ORTHO05D000653 7.5e-06 55.8 56 50.0
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 7.5e-06 55.8 57 49.1
Oeu017852.1 Olea europaea HOM05D001004 ORTHO05D000653 7.5e-06 55.8 50 58.0
CsaV3_2G017000 Cucumis sativus L. HOM05D001004 ORTHO05D000653 9.8e-06 55.5 56 51.8
Thhalv10011055m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 9.8e-06 55.5 56 48.2
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 9.8e-06 55.5 57 49.1


User provided reference genes

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