Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0651 Trochodendron aralioides HOM05D000138 ORTHO05D051501 6.5e-182 640.6 321 100.0
TAR622G0432 Trochodendron aralioides HOM05D000138 ORTHO05D000078 8.3e-44 181.8 140 73.6
TAR371G0748 Trochodendron aralioides HOM05D000138 ORTHO05D000078 9.3e-19 98.6 140 49.3
Dinv06518 Davidia involucrata HOM05D000138 ORTHO05D000078 4.8e-15 86.3 130 46.9
Dinv24960 Davidia involucrata HOM05D000138 ORTHO05D000078 6.2e-15 85.9 149 39.6
MBI12_g12389_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 8.1e-15 85.5 155 40.0
Dinv34208 Davidia involucrata HOM05D000138 ORTHO05D000078 1.1e-14 85.1 143 42.7
Eucgr.I01921 Eucalyptus grandis HOM05D000138 ORTHO05D000078 3.4e-13 80.1 155 39.4
Aqoxy3G00749 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 4.5e-13 79.7 133 46.6
Prupe.3G271200 Prunus persica HOM05D000138 ORTHO05D000078 6.4e-12 75.9 125 44.0
CSS0050214 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 8.4e-12 75.5 117 43.6
Dinv33722 Davidia involucrata HOM05D000138 ORTHO05D000078 1.9e-11 74.3 136 40.4
QL02p080721 Quercus lobata HOM05D000138 ORTHO05D000078 1.9e-11 74.3 142 41.5
TAR374G0332 Trochodendron aralioides HOM05D000138 ORTHO05D000078 2.4e-11 73.9 57 70.2
Potri.017G078600 Populus trichocarpa HOM05D000138 ORTHO05D000078 3.2e-11 73.6 137 38.7
CiPaw.03G029500 Carya illinoinensis HOM05D000138 ORTHO05D000078 4.2e-11 73.2 112 45.5
Cfa007516 Carpinus fangiana HOM05D000138 ORTHO05D000078 5.4e-11 72.8 133 45.1
Hma1.2p1_0449F.1_g155080 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 7.1e-11 72.4 129 41.9
Prupe.3G271400 Prunus persica HOM05D000138 ORTHO05D000078 9.3e-11 72.0 112 44.6
Manes.15G176860 Manihot esculenta HOM05D000138 ORTHO05D000078 7.9e-10 68.9 137 37.2
Oeu060922.1 Olea europaea HOM05D000138 ORTHO05D000078 1.8e-09 67.8 121 40.5
Thecc.04G075600 Theobroma cacao HOM05D000138 ORTHO05D000078 8.7e-09 65.5 129 41.1
Actinidia31185 Actinidia chinensis HOM05D000138 ORTHO05D000078 1.5e-08 64.7 129 34.1
Lj1g0028067 Lotus japonicus HOM05D000138 ORTHO05D000078 1.5e-08 64.7 134 42.5
DCAR_011157 Daucus carota HOM05D000138 ORTHO05D000078 2.5e-08 63.9 130 39.2
GSVIVG01020066001 Vitis vinifera HOM05D000138 ORTHO05D000078 2.5e-08 63.9 58 55.2
Ciclev10013824m.g Citrus clementina HOM05D000138 ORTHO05D000078 3.3e-08 63.5 126 38.1
VMungo1383G0316 Vigna mungo HOM05D000138 ORTHO05D000078 5.6e-08 62.8 133 39.8
Aqoxy3G03282 Aquilegia oxysepala HOM05D000138 ORTHO05D000078 7.4e-08 62.4 135 40.0
Duzib147G1207 Durio zibethinus HOM05D000138 ORTHO05D000078 7.4e-08 62.4 128 40.6
FAN02G4358 Fragaria x ananassa HOM05D000138 ORTHO05D000078 7.4e-08 62.4 156 39.1
Phvul.008G043500 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 7.4e-08 62.4 132 38.6
MD09G1047600 Malus domestica HOM05D000138 ORTHO05D000078 1.6e-07 61.2 111 41.4
MBI04_g10408_MAGBIO Magnolia biondii HOM05D000138 ORTHO05D000078 6.2e-07 59.3 134 38.1
Oeu018677.1 Olea europaea HOM05D000138 ORTHO05D000078 6.2e-07 59.3 115 40.0
Eucgr.J02131 Eucalyptus grandis HOM05D000138 ORTHO05D000078 8.1e-07 58.9 115 38.3
FAN09G4387 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.1e-06 58.5 156 37.8
FvH4_6g49200 Fragaria vesca HOM05D000138 ORTHO05D000078 1.4e-06 58.2 156 37.8
FAN14G1221 Fragaria x ananassa HOM05D000138 ORTHO05D000078 1.4e-06 58.2 156 37.8
COL.COLO4_25164 Corchorus olitorius HOM05D000138 ORTHO05D000078 2.4e-06 57.4 133 39.8
arahy.Tifrunner.gnm1.ann1.5MV2CV Arachis hypogaea HOM05D000138 ORTHO05D000078 3.1e-06 57.0 117 41.0
Ca_04269_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 3.1e-06 57.0 122 40.2
Glyma.18G256000 Glycine max HOM05D000138 ORTHO05D000078 4.0e-06 56.6 137 34.3
Psat0ss3759g0400 Pisum sativum HOM05D000846 ORTHO05D001340 4.0e-06 56.6 43 65.1
PSO591G0071 Papaver somniferum HOM05D000138 ORTHO05D000078 6.9e-06 55.8 150 32.7
RcHm_v2.0_Chr2g0169071 Rosa chinensis HOM05D000138 ORTHO05D000078 6.9e-06 55.8 146 39.0
arahy.Tifrunner.gnm1.ann1.F0M2KT Arachis hypogaea HOM05D000138 ORTHO05D000078 9.0e-06 55.5 117 40.2
CSS0009996 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 9.0e-06 55.5 148 30.4
PSO832G1762 Papaver somniferum HOM05D000138 ORTHO05D000078 9.0e-06 55.5 147 36.1
GSVIVG01014714001 Vitis vinifera HOM05D000846 ORTHO05D051501 9.0e-06 55.5 45 60.0


User provided reference genes

Program Settings