Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.3e-246 855.9 406 100.0
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 7.5e-191 670.6 375 83.7
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.4e-181 639.0 400 77.5
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 2.4e-181 639.0 352 84.1
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 7.0e-181 637.5 337 86.9
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 2.9e-179 632.1 388 77.1
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 3.8e-179 631.7 358 82.4
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 6.6e-179 630.9 365 80.0
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 8.6e-179 630.6 379 77.3
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.9e-178 629.4 386 78.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.6e-177 625.2 366 80.3
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 1.4e-176 623.2 392 76.3
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.4e-176 623.2 384 77.6
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 1.4e-176 623.2 352 82.7
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.8e-176 622.9 386 76.4
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 2.3e-176 622.5 394 75.9
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 3.0e-176 622.1 356 79.8
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 3.0e-176 622.1 398 75.6
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 4.0e-176 621.7 377 78.0
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 6.8e-176 620.9 380 77.1
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 8.9e-176 620.5 382 76.7
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 1.5e-175 619.8 397 75.3
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 2.0e-175 619.4 367 79.6
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 3.4e-175 618.6 390 77.4
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 3.4e-175 618.6 385 75.8
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 4.4e-175 618.2 384 77.1
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 7.5e-175 617.5 382 76.2
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 1.3e-174 616.7 391 75.4
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.3e-174 616.7 391 75.4
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 1.7e-174 616.3 403 73.9
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 2.9e-174 615.5 392 75.5
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 4.9e-174 614.8 388 75.8
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.1e-173 613.6 381 76.1
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 1.1e-173 613.6 378 76.2
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 1.1e-173 613.6 387 75.7
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 2.4e-173 612.5 366 77.0
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 3.2e-173 612.1 387 75.5
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 4.1e-173 611.7 383 74.7
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 7.0e-173 610.9 383 75.7
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 9.2e-173 610.5 379 76.8
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 1.2e-172 610.1 401 74.3
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 2.7e-172 609.0 385 75.6
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 3.5e-172 608.6 331 83.7
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.3e-171 606.7 392 75.5
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 1.7e-171 606.3 395 74.2
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.7e-171 606.3 331 83.4
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.9e-171 605.1 380 77.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.9e-171 605.1 368 76.6
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 8.6e-171 604.0 407 72.7
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.9e-170 602.8 329 84.2
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 1.9e-170 602.8 328 84.1
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 3.3e-170 602.1 390 73.3
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 7.3e-170 600.9 388 74.2
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.1e-168 597.0 351 79.5
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.8e-168 596.3 335 81.5
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.2e-167 593.6 396 72.5
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 4.4e-167 591.7 365 74.5
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.3e-166 590.1 353 78.2
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.7e-166 589.7 382 71.7
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 3.7e-166 588.6 364 75.8
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 4.9e-166 588.2 318 83.6
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 1.4e-165 586.6 375 74.4
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.9e-165 586.3 356 78.1
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 4.1e-165 585.1 299 90.3
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 5.4e-165 584.7 382 72.3
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 7.0e-165 584.3 331 80.4
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 9.2e-165 583.9 334 81.4
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 1.6e-164 583.2 320 81.2
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 2.0e-164 582.8 364 74.5
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 2.0e-164 582.8 360 77.8
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 2.7e-164 582.4 364 74.5
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 4.6e-164 581.6 316 83.5
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 6.0e-164 581.3 367 73.3
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 7.8e-164 580.9 364 73.9
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 1.0e-163 580.5 381 73.0
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.7e-163 579.7 381 71.4
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 3.3e-162 575.5 317 81.7
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 7.3e-162 574.3 318 81.1
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 1.4e-160 570.1 355 73.8
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.5e-159 566.6 386 69.4
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 2.6e-159 565.8 396 67.9
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 4.1e-157 558.5 359 75.5
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.3e-155 553.5 388 69.3
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 6.6e-155 551.2 428 67.3
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 4.3e-154 548.5 414 64.3
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.3e-154 548.5 322 76.4
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 4.4e-151 538.5 335 74.6
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 5.4e-149 531.6 381 69.0
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 2.1e-148 529.6 288 81.2
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 4.2e-141 505.4 286 79.7
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.2e-140 503.8 312 71.2
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.1e-140 503.1 314 71.3
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 3.9e-139 498.8 640 46.4
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 8.7e-139 497.7 320 67.8
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 5.6e-138 495.0 316 73.4
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 3.6e-137 492.3 309 69.6
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 8.4e-126 454.5 317 65.6
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 9.6e-122 441.0 247 81.8
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 8.8e-107 391.3 255 73.3
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 6.3e-105 385.2 268 70.1
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 4.7e-100 369.0 229 77.7
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 1.4e-96 357.5 280 62.9
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 1.9e-93 347.1 353 46.5
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.5e-82 310.8 349 43.0
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 9.1e-80 301.6 315 45.1
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.0e-79 300.4 316 45.6
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 1.6e-76 290.8 168 82.7
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.8e-65 253.4 191 64.4
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.3e-57 228.0 126 78.6
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 8.6e-54 215.3 199 53.3
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.5e-53 214.5 345 37.1
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 4.4e-50 203.0 134 72.4
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 1.9e-48 197.6 196 45.4
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 3.3e-45 186.8 206 50.0
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 9.2e-32 142.1 83 75.9
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.0e-22 112.1 69 73.9
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.6e-15 88.2 86 48.8
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 2.8e-12 77.4 62 59.7
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 5.3e-11 73.2 38 76.3
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.5e-08 64.3 52 55.8
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 7.9e-07 59.3 100 34.0
FAN26G0454 Fragaria x ananassa HOM05D000363 ORTHO05D000236 2.3e-06 57.8 121 33.9
Ciclev10016000m.g Citrus clementina HOM05D000363 ORTHO05D000236 3.9e-06 57.0 124 27.4
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 3.9e-06 57.0 121 31.4
FAN19G0844 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.1e-06 56.6 100 36.0
FAN23G1950 Fragaria x ananassa HOM05D000363 ORTHO05D000236 5.1e-06 56.6 121 33.9
MBI17_g03752_MAGBIO Magnolia biondii HOM05D000363 ORTHO05D000236 6.7e-06 56.2 100 35.0
Nn1g06618 Nelumbo nucifera HOM05D000363 ORTHO05D000236 8.7e-06 55.8 129 32.6
RcHm_v2.0_Chr5g0007821 Rosa chinensis HOM05D000363 ORTHO05D000236 8.7e-06 55.8 100 34.0


User provided reference genes

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