Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 9.4e-53 209.9 106 100.0
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 1.4e-43 179.5 106 86.8
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 4.3e-37 157.9 106 77.4
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 7.3e-37 157.1 106 77.4
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 2.0e-34 149.1 106 69.8
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 3.4e-34 148.3 100 71.0
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 3.4e-34 148.3 107 73.8
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 5.7e-34 147.5 101 71.3
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 9.8e-34 146.7 102 76.5
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 9.8e-34 146.7 106 72.6
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 1.3e-33 146.4 100 71.0
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.7e-33 146.0 98 74.5
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 2.9e-33 145.2 105 71.4
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 8.3e-33 143.7 106 70.8
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.1e-32 143.3 85 82.4
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.1e-32 143.3 98 72.4
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 1.1e-32 143.3 100 69.0
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 1.8e-32 142.5 106 67.9
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.8e-32 142.5 105 69.5
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 3.2e-32 141.7 96 74.0
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 4.1e-32 141.4 93 76.3
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 4.1e-32 141.4 97 71.1
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 7.0e-32 140.6 105 67.6
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 9.2e-32 140.2 106 69.8
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.6e-31 139.4 93 75.3
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 1.6e-31 139.4 100 70.0
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 2.0e-31 139.0 101 69.3
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 2.7e-31 138.7 106 68.9
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 2.7e-31 138.7 106 68.9
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 2.7e-31 138.7 106 68.9
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 3.5e-31 138.3 97 70.1
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 4.6e-31 137.9 106 66.0
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 4.6e-31 137.9 100 70.0
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 4.6e-31 137.9 89 77.5
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 5.9e-31 137.5 106 65.1
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 5.9e-31 137.5 106 66.0
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 7.8e-31 137.1 97 72.2
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 7.8e-31 137.1 90 77.8
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.0e-30 136.7 91 75.8
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 1.7e-30 136.0 106 67.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 1.7e-30 136.0 97 68.0
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 2.3e-30 135.6 86 74.4
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 2.3e-30 135.6 106 68.9
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 2.3e-30 135.6 100 65.0
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 3.0e-30 135.2 90 75.6
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 3.0e-30 135.2 89 74.2
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.9e-30 134.8 106 64.2
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 8.6e-30 133.7 89 73.0
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 1.1e-29 133.3 101 67.3
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.1e-29 133.3 106 64.2
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 1.5e-29 132.9 87 75.9
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 1.9e-29 132.5 85 74.1
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 2.5e-29 132.1 100 65.0
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 2.5e-29 132.1 87 74.7
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 2.5e-29 132.1 87 74.7
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 4.3e-29 131.3 98 66.3
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 4.3e-29 131.3 106 64.2
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 4.3e-29 131.3 101 65.3
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 4.3e-29 131.3 100 65.0
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 5.6e-29 131.0 102 66.7
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 5.6e-29 131.0 102 66.7
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 7.3e-29 130.6 101 65.3
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 7.3e-29 130.6 88 73.9
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 1.2e-28 129.8 90 74.4
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.6e-28 129.4 86 72.1
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.6e-28 129.4 88 71.6
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 2.1e-28 129.0 96 68.8
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 2.1e-28 129.0 92 69.6
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 4.7e-28 127.9 106 62.3
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 8.0e-28 127.1 106 63.2
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 1.0e-27 126.7 87 67.8
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.0e-27 126.7 97 67.0
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 1.4e-27 126.3 85 70.6
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.8e-27 125.9 88 70.5
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 2.3e-27 125.6 89 67.4
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 2.3e-27 125.6 89 64.0
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 4.0e-27 124.8 97 61.9
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 4.0e-27 124.8 89 68.5
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 8.9e-27 123.6 81 70.4
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 1.2e-26 123.2 85 69.4
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 1.2e-26 123.2 89 68.5
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 2.0e-26 122.5 84 67.9
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 2.0e-26 122.5 106 59.4
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 2.6e-26 122.1 89 66.3
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 4.4e-26 121.3 104 61.5
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 5.8e-26 120.9 92 62.0
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 7.5e-26 120.6 106 59.4
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 7.5e-26 120.6 86 67.4
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 1.3e-25 119.8 96 60.4
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 2.2e-25 119.0 106 57.5
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 2.2e-25 119.0 106 57.5
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 2.2e-25 119.0 106 57.5
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 2.2e-25 119.0 106 57.5
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 2.2e-25 119.0 106 57.5
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 6.4e-25 117.5 96 59.4
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.1e-24 116.7 96 60.4
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 2.0e-23 112.5 80 68.8
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 2.7e-23 112.1 109 56.9
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 6.0e-23 110.9 83 62.7
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 7.8e-23 110.5 77 72.7
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 3.0e-22 108.6 73 72.6
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 1.9e-21 105.9 87 57.5
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 8.1e-20 100.5 102 53.9
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 2.3e-19 99.0 63 77.8
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 5.2e-19 97.8 89 47.2
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 1.2e-18 96.7 89 46.1
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 2.9e-17 92.0 86 47.7
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 8.3e-17 90.5 103 46.6
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 2.1e-15 85.9 84 50.0
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 6.6e-14 80.9 70 55.7
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 2.0e-10 69.3 84 38.1
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 3.4e-10 68.6 84 38.1
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 1.7e-09 66.2 80 40.0
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 3.2e-08 62.0 84 41.7
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 2.7e-07 58.9 92 40.2


User provided reference genes

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