Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0425 Trochodendron aralioides HOM05D005432 ORTHO05D004599 5.7e-95 350.9 178 100.0
TAR628G1364 Trochodendron aralioides HOM05D005432 ORTHO05D004599 6.0e-60 234.6 180 71.7
TAR625G0570 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.4e-48 196.8 165 63.0
TAR381G0486 Trochodendron aralioides HOM05D005432 ORTHO05D004599 1.6e-44 183.3 185 60.0
Manes.13G109800 Manihot esculenta HOM05D005432 ORTHO05D004599 6.7e-35 151.4 189 52.9
Potri.007G006200 Populus trichocarpa HOM05D005432 ORTHO05D004599 4.3e-34 148.7 196 53.1
Sabra14G0006100 Salix brachista HOM05D005432 ORTHO05D004599 7.4e-34 147.9 160 53.8
Potri.014G006400 Populus trichocarpa HOM05D005432 ORTHO05D004599 2.2e-33 146.4 196 50.5
QL06p039087 Quercus lobata HOM05D005432 ORTHO05D004599 2.8e-33 146.0 182 51.6
Actinidia11967 Actinidia chinensis HOM05D005432 ORTHO05D004599 1.8e-32 143.3 175 52.0
Sabra07G0004500 Salix brachista HOM05D005432 ORTHO05D004599 5.3e-32 141.7 192 50.5
Manes.12G116300 Manihot esculenta HOM05D005432 ORTHO05D004599 7.6e-31 137.9 169 52.7
Nn5g30641 Nelumbo nucifera HOM05D005432 ORTHO05D004599 1.6e-28 130.2 199 49.2
Thecc.01G075000 Theobroma cacao HOM05D005432 ORTHO05D004599 4.6e-28 128.6 188 48.4
Ciclev10026545m.g Citrus clementina HOM05D005432 ORTHO05D004599 6.3e-25 118.2 194 44.3
Duzib147G0737 Durio zibethinus HOM05D005432 ORTHO05D004599 3.1e-24 115.9 192 44.8
Duzib187G0823 Durio zibethinus HOM05D005432 ORTHO05D004599 3.1e-24 115.9 196 44.4
Rhsim10G0095000 Rhododendron simsii HOM05D005432 ORTHO05D004599 3.1e-24 115.9 220 40.5
Gohir.D12G076200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 5.3e-24 115.2 176 42.6
Gorai.008G084600 Gossypium raimondii HOM05D005432 ORTHO05D004599 6.9e-24 114.8 176 42.6
TWI74G0597 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.5e-23 113.6 170 43.5
MD02G1188600 Malus domestica HOM05D005432 ORTHO05D004599 4.5e-23 112.1 199 44.7
FvH4_1g18020 Fragaria vesca HOM05D005432 ORTHO05D004599 1.0e-22 110.9 177 44.6
FAN19G1119 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.0e-22 110.9 177 44.6
TWI77G0559 Tripterygium wilfordii HOM05D005432 ORTHO05D004599 1.0e-22 110.9 174 42.0
Gohir.A12G078000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.3e-22 110.5 192 41.7
Dinv23035 Davidia involucrata HOM05D005432 ORTHO05D004599 1.7e-22 110.2 174 49.4
CANSAT01G2351 Cannabis sativa HOM05D005432 ORTHO05D004599 2.2e-22 109.8 199 42.2
Atru.chr3.1044 Acer truncatum HOM05D005432 ORTHO05D004599 2.9e-22 109.4 187 47.1
Gohir.A11G213000 Gossypium hirsutum HOM05D005432 ORTHO05D004599 3.8e-22 109.0 159 45.3
Duzib264G0647 Durio zibethinus HOM05D005432 ORTHO05D004599 5.0e-22 108.6 195 44.6
Gorai.007G225500 Gossypium raimondii HOM05D005432 ORTHO05D004599 5.0e-22 108.6 162 45.7
CiPaw.01G002700 Carya illinoinensis HOM05D005432 ORTHO05D004599 6.5e-22 108.2 183 44.8
MBI16_g39101_MAGBIO Magnolia biondii HOM05D005432 ORTHO05D004599 1.1e-21 107.5 176 45.5
RcHm_v2.0_Chr2g0108511 Rosa chinensis HOM05D005432 ORTHO05D004599 1.4e-21 107.1 176 43.8
FAN23G2070 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.9e-21 106.7 176 43.8
FAN26G1008 Fragaria x ananassa HOM05D005432 ORTHO05D004599 5.5e-21 105.1 175 43.4
CiPaw.02G001400 Carya illinoinensis HOM05D005432 ORTHO05D004599 7.2e-21 104.8 189 43.4
DCAR_010807 Daucus carota HOM05D005432 ORTHO05D004599 1.2e-20 104.0 184 39.7
Gohir.D11G210200 Gossypium hirsutum HOM05D005432 ORTHO05D004599 1.2e-20 104.0 190 43.2
COL.COLO4_11602 Corchorus olitorius HOM05D005432 ORTHO05D004599 2.7e-20 102.8 153 45.1
Rhsim10G0095100 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.0e-19 100.9 192 38.5
Hma1.2p1_0424F.1_g150570 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 1.8e-19 100.1 181 42.5
Oeu011980.1 Olea europaea HOM05D005432 ORTHO05D004599 1.8e-19 100.1 190 44.7
Cfa004151 Carpinus fangiana HOM05D005432 ORTHO05D004599 2.3e-19 99.8 187 44.4
Prupe.6G218200 Prunus persica HOM05D005432 ORTHO05D004599 1.1e-18 97.4 193 43.0
Prupe.6G218300 Prunus persica HOM05D005432 ORTHO05D004599 1.5e-18 97.1 201 41.8
PGR102G0812 Punica granatum HOM05D005432 ORTHO05D004599 1.5e-18 97.1 199 43.2
Haze_15264 Corylus avellana HOM05D005432 ORTHO05D004599 5.7e-18 95.1 185 41.1
SalBow5G2133 Salvia bowleyana HOM05D005432 ORTHO05D004599 2.2e-17 93.2 154 44.2
Gohir.A11G048800 Gossypium hirsutum HOM05D005432 ORTHO05D004599 6.3e-17 91.7 179 44.1
ClCG01G017720 Citrullus lanatus HOM05D005432 ORTHO05D004599 8.2e-17 91.3 147 44.2
Cc07_g07280 Coffea canephora HOM05D005432 ORTHO05D004599 8.2e-17 91.3 224 39.7
Rhsim08G0092400 Rhododendron simsii HOM05D005432 ORTHO05D004599 1.1e-16 90.9 183 40.4
Eucgr.H02317 Eucalyptus grandis HOM05D005432 ORTHO05D004599 5.3e-16 88.6 151 41.1
Nitab4.5_0000680g0130 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.6e-15 86.3 207 37.2
MELO3C007650.2 Cucumis melo HOM05D005432 ORTHO05D004599 5.9e-15 85.1 149 42.3
Peaxi162Scf00500g00034 Petunia axillaris HOM05D005432 ORTHO05D004599 1.7e-14 83.6 223 34.1
Aqoxy6G02535 Aquilegia oxysepala HOM05D005432 ORTHO05D004599 2.2e-14 83.2 180 38.3
CsaV3_6G044250 Cucumis sativus L. HOM05D005432 ORTHO05D004599 3.8e-14 82.4 140 41.4
Sed0012898 Sechium edule HOM05D005432 ORTHO05D004599 3.8e-14 82.4 178 38.2
SGA_v2.0_scaffold15G07481 Striga asiatica HOM05D005432 ORTHO05D004599 3.8e-14 82.4 184 37.0
Lsat_1_v5_gn_4_160141 Lactuca sativa HOM05D005432 ORTHO05D004599 5.0e-14 82.0 211 37.0
Gorai.007G056800 Gossypium raimondii HOM05D005432 ORTHO05D004599 6.5e-14 81.6 176 40.9
Gohir.D11G052400 Gossypium hirsutum HOM05D005432 ORTHO05D004599 8.5e-14 81.3 176 40.9
Nn6g34511 Nelumbo nucifera HOM05D005432 ORTHO05D004599 8.5e-14 81.3 175 41.1
Lsat_1_v5_gn_4_160361 Lactuca sativa HOM05D005432 ORTHO05D004599 1.1e-13 80.9 182 37.9
Migut.L00424 Erythranthe guttata HOM05D005432 ORTHO05D004599 1.9e-13 80.1 159 40.3
FAN28G2020 Fragaria x ananassa HOM05D005432 ORTHO05D004599 1.9e-13 80.1 99 55.6
Sopen02g014700 Solanum pennellii HOM05D005432 ORTHO05D004599 1.9e-13 80.1 210 36.7
Cpa.g.sc129.80 Carica papaya HOM05D005432 ORTHO05D004599 4.2e-13 79.0 162 42.0
PGSC0003DMG400003320 Solanum tuberosum HOM05D005432 ORTHO05D004599 4.2e-13 79.0 198 36.9
Eucgr.H02318 Eucalyptus grandis HOM05D005432 ORTHO05D004599 9.4e-13 77.8 152 39.5
PGSC0003DMG400012977 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.2e-12 77.4 200 37.0
MD02G1188700 Malus domestica HOM05D005432 ORTHO05D004599 2.7e-12 76.3 183 41.0
Nitab4.5_0008385g0020 Nicotiana tabacum HOM05D005432 ORTHO05D004599 2.7e-12 76.3 189 37.0
Hma1.2p1_1085F.1_g255410 Hydrangea macrophylla HOM05D005432 ORTHO05D004599 4.7e-12 75.5 192 37.5
ECA232G3846 Erigeron canadensis HOM05D005432 ORTHO05D004599 1.4e-11 73.9 199 36.7
Glyma.11G046400 Glycine max HOM05D005432 ORTHO05D004599 1.4e-11 73.9 161 37.9
Nitab4.5_0000680g0150 Nicotiana tabacum HOM05D005432 ORTHO05D004599 1.8e-11 73.6 164 36.0
PSO541G2677 Papaver somniferum HOM05D005432 ORTHO05D004599 1.8e-11 73.6 213 33.3
Solyc09g008750.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.8e-11 73.6 209 33.5
Glyma.05G107500 Glycine max HOM05D005432 ORTHO05D004599 2.3e-11 73.2 193 35.2
Nitab4.5_0008385g0010 Nicotiana tabacum HOM05D005432 ORTHO05D004599 5.2e-11 72.0 208 35.1
Solyc02g064570.2 Solanum lycopersicum HOM05D005432 ORTHO05D004599 5.2e-11 72.0 198 34.8
Migut.H00333 Erythranthe guttata HOM05D005432 ORTHO05D004599 6.7e-11 71.6 146 40.4
Migut.L00423 Erythranthe guttata HOM05D005432 ORTHO05D004599 2.0e-10 70.1 148 37.2
CAN.G1830.1 Capsicum annuum HOM05D005432 ORTHO05D004599 7.4e-10 68.2 154 32.5
Phvul.003G233700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 1.3e-09 67.4 201 34.8
PGSC0003DMG400002732 Solanum tuberosum HOM05D005432 ORTHO05D004599 1.7e-09 67.0 220 33.2
Glyma.01G195300 Glycine max HOM05D005432 ORTHO05D004599 3.7e-09 65.9 164 36.0
VMungo0251G2573 Vigna mungo HOM05D005432 ORTHO05D004599 3.7e-09 65.9 190 36.8
VMungo1215G3148 Vigna mungo HOM05D005432 ORTHO05D004599 3.7e-09 65.9 188 36.7
ECA232G0649 Erigeron canadensis HOM05D005432 ORTHO05D004599 4.8e-09 65.5 203 34.5
Glyma.17G159600 Glycine max HOM05D005432 ORTHO05D004599 1.4e-08 63.9 203 34.5
Peaxi162Scf00449g00414 Petunia axillaris HOM05D005432 ORTHO05D004599 1.4e-08 63.9 198 33.8
Solyc09g008740.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.4e-08 63.9 170 31.2
Solyc09g008760.1 Solanum lycopersicum HOM05D005432 ORTHO05D004599 1.4e-08 63.9 230 30.4
CAN.G775.5 Capsicum annuum HOM05D005432 ORTHO05D004599 4.1e-08 62.4 156 35.9
MBI16_g16466_MAGBIO Magnolia biondii HOM05D005432 ORTHO05D004599 4.1e-08 62.4 85 45.9
Eucgr.H02319 Eucalyptus grandis HOM05D005432 ORTHO05D004599 9.1e-08 61.2 137 35.8
Sopen09g003530 Solanum pennellii HOM05D005432 ORTHO05D004599 9.1e-08 61.2 174 31.0
Oeu021446.1 Olea europaea HOM05D005432 ORTHO05D004599 1.6e-07 60.5 170 34.7
C08p40200 Brassica napus HOM05D009364 ORTHO05D004599 2.0e-07 60.1 146 34.2
BolC8t51591H Brassica oleracea HOM05D009364 ORTHO05D004599 2.0e-07 60.1 146 34.2
PGSC0003DMG400012978 Solanum tuberosum HOM05D005432 ORTHO05D004599 2.0e-07 60.1 176 29.5
A09p57200 Brassica napus HOM05D009364 ORTHO05D004599 2.6e-07 59.7 146 34.2
BraA09t41113Z Brassica rapa HOM05D009364 ORTHO05D004599 2.6e-07 59.7 146 34.2
ClCG02G012170 Citrullus lanatus HOM05D005432 ORTHO05D004599 2.6e-07 59.7 57 56.1
Lalb_Chr05g0225821 Lupinus albus HOM05D005432 ORTHO05D004599 3.5e-07 59.3 184 33.7
Sp4g01930 Schrenkiella parvula HOM05D009364 ORTHO05D004599 4.5e-07 58.9 145 34.5
CsaV3_2G016320 Cucumis sativus L. HOM05D005432 ORTHO05D004599 7.7e-07 58.2 46 60.9
Phvul.002G009700 Phaseolus vulgaris HOM05D005432 ORTHO05D004599 1.3e-06 57.4 50 62.0
Sopen09g003550 Solanum pennellii HOM05D005432 ORTHO05D004599 1.7e-06 57.0 179 28.5
CAN.G1830.3 Capsicum annuum HOM05D005432 ORTHO05D004599 2.2e-06 56.6 181 28.2
Lsat_1_v5_gn_4_160241 Lactuca sativa HOM05D005432 ORTHO05D004599 2.2e-06 56.6 107 41.1
Sopen09g003540 Solanum pennellii HOM05D005432 ORTHO05D004599 2.2e-06 56.6 160 30.0
CDE04G1981 Ceratophyllum demersum HOM05D005432 ORTHO05D004599 2.9e-06 56.2 166 31.9
ECA232G3481 Erigeron canadensis HOM05D005432 ORTHO05D004599 2.9e-06 56.2 171 31.0
Medtr5g015190 Medicago truncatula HOM05D005432 ORTHO05D004599 3.8e-06 55.8 56 57.1
MELO3C020843.2 Cucumis melo HOM05D005432 ORTHO05D004599 5.0e-06 55.5 60 51.7
Lsat_1_v5_gn_4_160281 Lactuca sativa HOM05D005432 ORTHO05D004599 5.0e-06 55.5 121 38.0
Carub.0004s0201 Capsella rubella HOM05D009364 ORTHO05D004599 6.5e-06 55.1 147 32.0
BcaC07g41018 Brassica carinata HOM05D009364 ORTHO05D004599 8.5e-06 54.7 86 40.7
Sed0017136 Sechium edule HOM05D005432 ORTHO05D004599 8.5e-06 54.7 49 53.1


User provided reference genes

Program Settings