Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.2e-107 393.3 212 100.0
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.8e-87 326.2 213 84.0
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 9.9e-78 293.9 210 73.8
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 4.2e-76 288.5 211 73.0
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 9.3e-76 287.3 194 77.3
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 1.0e-74 283.9 199 75.9
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 2.3e-74 282.7 199 78.4
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 6.7e-74 281.2 209 72.7
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 1.1e-73 280.4 210 71.0
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 1.1e-73 280.4 209 72.2
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 1.1e-71 273.9 210 71.4
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 1.4e-71 273.5 186 76.3
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 1.4e-71 273.5 207 70.5
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 1.4e-71 273.5 212 68.9
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 1.4e-71 273.5 185 75.7
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 1.8e-71 273.1 213 70.4
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.8e-71 273.1 208 71.6
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 2.4e-71 272.7 200 73.0
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 3.1e-71 272.3 199 74.4
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 4.0e-71 271.9 200 72.5
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 5.3e-71 271.6 220 68.6
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 5.3e-71 271.6 207 70.0
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 5.3e-71 271.6 207 72.0
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 9.0e-71 270.8 211 68.7
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.2e-70 270.4 209 70.3
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 1.5e-70 270.0 187 76.5
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 4.5e-70 268.5 187 74.3
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 1.0e-69 267.3 211 69.7
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 1.3e-69 266.9 192 73.4
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 1.7e-69 266.5 207 68.6
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 4.9e-69 265.0 212 67.5
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 6.5e-69 264.6 208 69.7
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 8.4e-69 264.2 192 72.9
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.1e-68 263.8 205 71.2
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 1.4e-68 263.5 198 70.7
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 1.4e-68 263.5 211 67.8
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 1.4e-68 263.5 207 68.1
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 1.9e-68 263.1 198 70.7
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 2.5e-68 262.7 211 69.2
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 4.2e-68 261.9 193 71.5
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 5.5e-68 261.5 234 63.7
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 5.5e-68 261.5 209 67.9
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.2e-67 260.4 233 63.5
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 1.2e-67 260.4 194 72.2
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 1.2e-67 260.4 198 69.7
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.2e-67 260.4 202 69.3
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 2.7e-67 259.2 186 70.4
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 3.5e-67 258.8 186 74.2
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 6.0e-67 258.1 185 72.4
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 7.9e-67 257.7 211 65.4
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.0e-66 257.3 211 65.4
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 1.0e-66 257.3 194 72.7
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 3.9e-66 255.4 212 66.0
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 1.1e-65 253.8 218 64.7
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 1.5e-65 253.4 198 69.7
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 4.3e-65 251.9 214 65.4
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 5.7e-65 251.5 191 68.6
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 1.6e-64 250.0 213 68.1
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 1.6e-64 250.0 196 68.4
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 1.6e-64 250.0 227 61.2
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 3.7e-64 248.8 198 67.2
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 5.3e-63 245.0 188 70.2
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 5.8e-62 241.5 211 62.6
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 7.6e-62 241.1 188 67.6
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 7.6e-62 241.1 186 67.2
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.0e-61 240.7 185 71.9
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 1.3e-61 240.4 187 66.3
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 1.3e-61 240.4 182 67.6
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 2.9e-61 239.2 197 64.5
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 3.8e-61 238.8 201 62.7
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 1.1e-60 237.3 180 70.6
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 5.5e-60 235.0 197 64.5
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 7.2e-60 234.6 210 63.8
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 1.2e-59 233.8 198 65.2
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 1.3e-58 230.3 191 63.9
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 5.1e-58 228.4 189 65.6
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 8.7e-58 227.6 199 64.8
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 1.9e-57 226.5 185 64.3
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 1.9e-57 226.5 185 64.3
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 1.9e-57 226.5 185 64.3
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-57 225.7 190 64.7
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-57 225.7 190 64.7
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-57 225.7 190 64.7
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 4.3e-57 225.3 191 63.4
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 4.3e-57 225.3 192 65.6
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 4.3e-57 225.3 207 63.3
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 2.2e-56 223.0 210 59.0
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 2.8e-56 222.6 172 67.4
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 2.8e-56 222.6 172 67.4
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 3.7e-56 222.2 189 66.7
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.4e-55 219.5 186 62.9
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 2.4e-55 219.5 200 63.0
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.5e-54 216.9 170 67.6
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.0e-54 216.5 198 60.1
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 2.0e-54 216.5 158 70.9
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 3.4e-54 215.7 198 62.6
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 4.5e-54 215.3 148 73.6
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.9e-52 209.9 147 74.8
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 5.5e-52 208.4 147 74.1
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 7.2e-52 208.0 210 58.1
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 1.6e-51 206.8 241 52.7
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 7.9e-51 204.5 144 70.8
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 7.9e-51 204.5 138 77.5
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 5.1e-50 201.8 188 58.0
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 2.8e-48 196.1 130 77.7
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 1.2e-46 190.7 139 70.5
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 2.0e-46 189.9 168 58.3
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 2.6e-46 189.5 116 81.0
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 5.0e-45 185.3 118 77.1
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 2.1e-43 179.9 186 53.2
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 4.7e-43 178.7 199 54.8
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 1.0e-42 177.6 124 71.0
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 5.1e-42 175.3 136 70.6
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 2.2e-40 169.9 137 67.9
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 2.4e-39 166.4 122 76.2
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 2.1e-35 153.3 119 68.9
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.0e-29 134.4 113 64.6
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.5e-28 130.6 82 80.5
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 4.2e-28 129.0 214 38.8
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 7.2e-28 128.3 82 79.3
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 2.1e-27 126.7 148 54.7
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 8.0e-27 124.8 99 65.7
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 1.8e-26 123.6 82 76.8
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 4.0e-26 122.5 175 38.9
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 1.3e-24 117.5 151 49.7
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 4.8e-24 115.5 121 51.2
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 6.3e-24 115.2 96 63.5
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.8e-23 113.6 210 33.3
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 4.1e-23 112.5 82 68.3
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 1.0e-21 107.8 70 77.1
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 3.0e-18 96.3 119 39.5
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 5.2e-18 95.5 78 64.1
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 5.2e-18 95.5 65 72.3
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 3.4e-17 92.8 64 76.6
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 4.9e-16 89.0 140 38.6
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 5.2e-10 68.9 82 48.8


User provided reference genes

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