Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0381 Trochodendron aralioides HOM05D008758 ORTHO05D009412 7.2e-25 116.7 70 100.0
TAR376G0225 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.4e-23 112.5 70 97.1
TAR376G0113 Trochodendron aralioides HOM05D008758 ORTHO05D009412 7.4e-22 106.7 70 91.4
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 7.4e-22 106.7 70 92.9
TAR376G0475 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.8e-21 104.8 70 90.0
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 4.1e-20 100.9 71 90.1
TAR633G0918 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.9e-17 92.0 70 78.6
TAR291G0003 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.5e-17 91.7 70 82.9
TAR375G0878 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.5e-17 91.7 70 82.9
TAR291G0001 Trochodendron aralioides HOM05D008758 ORTHO05D009412 4.2e-17 90.9 70 81.4
TAR375G0339 Trochodendron aralioides HOM05D008758 ORTHO05D009412 4.2e-17 90.9 70 81.4
Nn2g15429 Nelumbo nucifera HOM05D008758 ORTHO05D009412 2.2e-13 78.6 72 73.6
Nn7g36171 Nelumbo nucifera HOM05D008758 ORTHO05D009412 2.9e-10 68.2 70 60.0
Potri.016G052200 Populus trichocarpa HOM05D008758 ORTHO05D009412 2.9e-10 68.2 70 60.0
TAR633G0082 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.1e-09 66.2 47 78.7
Atru.chr1.1009 Acer truncatum HOM05D008758 ORTHO05D009412 1.5e-09 65.9 70 55.7
Atru.chr1.977 Acer truncatum HOM05D008758 ORTHO05D009412 1.5e-09 65.9 70 55.7
Atru.chr1.980 Acer truncatum HOM05D008758 ORTHO05D009412 2.5e-09 65.1 70 57.1
Atru.chr1.1012 Acer truncatum HOM05D008758 ORTHO05D009412 1.2e-08 62.8 70 54.3
PGSC0003DMG400027225 Solanum tuberosum HOM05D008319 ORTHO05D009412 1.6e-08 62.4 70 52.9
Atru.chr1.1014 Acer truncatum HOM05D008758 ORTHO05D009412 2.1e-08 62.0 63 57.1
Atru.chr1.1010 Acer truncatum HOM05D008758 ORTHO05D009412 2.7e-08 61.6 70 52.9
Atru.chr1.1011 Acer truncatum HOM05D008758 ORTHO05D009412 2.7e-08 61.6 70 51.4
QL07p021867 Quercus lobata HOM05D008758 ORTHO05D009412 2.7e-08 61.6 69 55.1
Atru.chr1.978 Acer truncatum HOM05D008758 ORTHO05D009412 4.7e-08 60.8 70 52.9
Manes.07G005200 Manihot esculenta HOM05D012217 ORTHO05D009412 8.0e-08 60.1 71 56.3
TWI09G0015 Tripterygium wilfordii HOM05D012217 ORTHO05D013836 1.4e-07 59.3 70 55.7
Potri.006G056000 Populus trichocarpa HOM05D008758 ORTHO05D009412 2.3e-07 58.5 71 56.3
Peaxi162Scf00164g01135 Petunia axillaris HOM05D008319 ORTHO05D009412 3.0e-07 58.2 70 50.0
Solyc05g053060.1 Solanum lycopersicum HOM05D008319 ORTHO05D009412 4.0e-07 57.8 70 51.4
Sopen05g031580 Solanum pennellii HOM05D008319 ORTHO05D009412 4.0e-07 57.8 70 51.4
PGSC0003DMG400008180 Solanum tuberosum HOM05D008319 ORTHO05D009412 4.0e-07 57.8 70 51.4
Nn2g15427 Nelumbo nucifera HOM05D008758 ORTHO05D009412 6.7e-07 57.0 70 62.9
Nitab4.5_0003074g0030 Nicotiana tabacum HOM05D008319 ORTHO05D009412 8.8e-07 56.6 70 54.3
ClCG04G000650 Citrullus lanatus HOM05D008758 ORTHO05D009412 1.2e-06 56.2 60 51.7
Sc11g0009250 Simmondsia chinensis HOM05D008758 ORTHO05D009412 1.2e-06 56.2 70 48.6
Nn2g15428 Nelumbo nucifera HOM05D008758 ORTHO05D009412 1.5e-06 55.8 60 58.3
Sopen10g029740 Solanum pennellii HOM05D008319 ORTHO05D009412 1.5e-06 55.8 70 50.0
CAN.G1392.9 Capsicum annuum HOM05D008319 ORTHO05D009412 2.0e-06 55.5 60 48.3
Peaxi162Scf00189g00522 Petunia axillaris HOM05D008319 ORTHO05D018042 2.6e-06 55.1 71 53.5
Sabra06G0039600 Salix brachista HOM05D008758 ORTHO05D009412 4.4e-06 54.3 70 58.6
Oeu064313.1 Olea europaea HOM05D008319 ORTHO05D009412 5.7e-06 53.9 71 50.7
Sed0026319 Sechium edule HOM05D008758 ORTHO05D009412 5.7e-06 53.9 62 48.4
Potri.001G268400 Populus trichocarpa HOM05D012217 ORTHO05D009412 7.5e-06 53.5 71 52.1


User provided reference genes

Program Settings