Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 2.8e-140 501.9 249 100.0
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 5.2e-134 481.1 249 94.4
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 2.5e-128 462.2 248 89.5
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 3.6e-127 458.4 249 87.1
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 6.1e-127 457.6 248 88.3
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 8.0e-127 457.2 255 88.2
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 1.4e-126 456.4 248 87.5
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 6.7e-126 454.1 248 87.9
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 6.7e-126 454.1 248 87.9
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 8.8e-126 453.8 249 87.6
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 2.6e-125 452.2 249 88.8
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 3.3e-125 451.8 249 87.1
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.8e-124 448.7 249 87.6
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.8e-124 448.7 249 87.6
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 3.1e-123 445.3 249 86.3
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.2e-122 443.4 250 86.8
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 1.2e-122 443.4 249 86.7
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 1.6e-122 443.0 250 87.6
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 1.6e-122 443.0 250 87.6
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 4.5e-122 441.4 275 78.5
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.0e-121 440.3 249 85.1
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.3e-121 439.9 248 83.1
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.7e-121 439.5 251 85.7
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 2.2e-121 439.1 260 81.9
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 2.2e-121 439.1 249 85.1
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 5.0e-121 438.0 250 86.0
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 5.0e-121 438.0 250 84.4
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 6.5e-121 437.6 251 84.9
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 6.5e-121 437.6 251 84.9
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 6.5e-121 437.6 250 84.0
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 1.5e-120 436.4 249 85.5
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 1.5e-120 436.4 250 84.0
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 1.9e-120 436.0 249 85.1
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.9e-120 436.0 250 83.6
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 2.5e-120 435.6 250 84.8
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 5.5e-120 434.5 249 84.3
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 9.4e-120 433.7 250 84.8
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.2e-119 433.3 249 83.9
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 1.0e-118 430.3 249 82.7
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 1.0e-118 430.3 251 84.1
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 4.0e-118 428.3 249 81.9
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 5.2e-118 427.9 290 74.5
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 6.8e-118 427.6 249 84.3
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 8.8e-118 427.2 249 82.3
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 1.2e-117 426.8 249 81.9
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 1.5e-117 426.4 251 80.9
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 1.5e-117 426.4 249 82.3
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 2.0e-117 426.0 249 81.9
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 3.4e-117 425.2 248 82.3
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 3.4e-117 425.2 249 81.5
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 3.4e-117 425.2 252 81.7
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 4.4e-117 424.9 249 81.5
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 4.4e-117 424.9 249 81.5
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 4.4e-117 424.9 249 83.1
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 4.4e-117 424.9 249 81.1
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 5.7e-117 424.5 249 81.9
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 7.5e-117 424.1 249 81.9
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 7.5e-117 424.1 249 79.9
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 9.8e-117 423.7 249 81.9
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 9.8e-117 423.7 271 78.6
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 9.8e-117 423.7 249 83.1
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 1.3e-116 423.3 252 81.3
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 1.7e-116 422.9 249 81.1
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 1.7e-116 422.9 276 76.1
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 2.2e-116 422.5 250 80.8
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 4.8e-116 421.4 255 82.4
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 6.3e-116 421.0 253 81.8
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 8.3e-116 420.6 255 80.4
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 1.1e-115 420.2 250 80.8
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.1e-115 420.2 250 80.8
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.4e-115 419.9 254 81.5
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 1.8e-115 419.5 253 81.4
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 2.4e-115 419.1 249 81.5
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 4.1e-115 418.3 249 79.9
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 1.2e-114 416.8 252 79.4
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 3.5e-114 415.2 251 79.7
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 4.5e-114 414.8 248 80.2
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 1.3e-113 413.3 234 83.3
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 6.5e-113 411.0 248 80.2
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 8.6e-113 410.6 249 81.1
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 1.0e-110 403.7 252 80.2
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 3.0e-110 402.1 252 79.8
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 3.4e-109 398.7 248 77.0
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 4.4e-109 398.3 222 84.7
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 1.7e-108 396.4 222 84.2
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 1.8e-107 392.9 231 81.4
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 1.8e-107 392.9 231 81.4
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 4.1e-107 391.7 248 79.0
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 3.8e-105 385.2 248 76.6
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 1.6e-103 379.8 254 74.0
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 3.6e-103 378.6 249 77.5
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 3.6e-103 378.6 251 72.1
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 1.2e-101 373.6 248 71.8
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 1.3e-100 370.2 221 81.4
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 2.2e-100 369.4 449 48.3
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 4.9e-100 368.2 219 83.6
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 6.4e-100 367.9 250 75.2
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 2.4e-99 365.9 251 69.3
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 3.2e-99 365.5 208 85.6
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.3e-97 359.4 253 75.5
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 1.1e-96 357.1 279 67.7
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 4.3e-96 355.1 251 72.9
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 4.0e-94 348.6 237 73.4
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 5.2e-94 348.2 250 67.6
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 2.2e-92 342.8 235 69.4
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 1.4e-91 340.1 250 70.8
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.7e-90 335.9 242 69.8
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 5.0e-89 331.6 207 76.3
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 1.5e-88 330.1 248 66.1
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 5.6e-88 328.2 190 82.6
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 3.6e-87 325.5 249 68.7
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 1.4e-86 323.6 195 79.0
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 4.0e-86 322.0 249 63.1
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 7.5e-85 317.8 268 64.2
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 1.3e-81 307.0 335 55.2
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.3e-81 306.2 278 60.4
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 2.6e-77 292.7 210 72.4
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 3.4e-77 292.4 202 74.3
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.1e-75 287.3 248 62.9
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.3e-73 280.4 207 69.6
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 3.9e-73 278.9 157 84.1
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 4.0e-70 268.9 227 54.6
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 7.6e-69 264.6 157 80.9
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 1.0e-65 254.2 228 51.8
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 8.7e-65 251.1 170 73.5
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 1.5e-64 250.4 283 51.9
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 5.6e-64 248.4 230 53.5
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 5.6e-64 248.4 145 79.3
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 9.9e-61 237.7 140 85.0
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 2.3e-57 226.5 157 72.0
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 2.5e-56 223.0 206 57.8
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.9e-48 196.8 114 81.6
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 1.3e-44 184.1 115 77.4
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 5.7e-40 168.7 129 69.8
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.5e-37 160.6 91 80.2
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 5.0e-36 155.6 92 77.2
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 3.9e-33 146.0 174 48.3
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.5e-32 144.1 248 42.3
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-29 132.5 102 67.6
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 4.2e-19 99.4 51 88.2


User provided reference genes

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