Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0261 Trochodendron aralioides HOM05D005669 ORTHO05D026298 1.3e-79 299.7 153 100.0
TAR628G1623 Trochodendron aralioides HOM05D005669 ORTHO05D007632 3.4e-43 178.7 232 49.6
Nn5g31030 Nelumbo nucifera HOM05D005669 ORTHO05D007632 6.6e-39 164.5 136 60.3
Dinv31980 Davidia involucrata HOM05D005669 ORTHO05D007632 2.3e-36 156.0 120 65.8
Thecc.05G147000 Theobroma cacao HOM05D005669 ORTHO05D007632 8.3e-34 147.5 123 60.2
Manes.05G126500 Manihot esculenta HOM05D005669 ORTHO05D007632 1.1e-33 147.1 141 55.3
CiPaw.07G134500 Carya illinoinensis HOM05D005669 ORTHO05D007632 5.9e-32 141.4 124 61.3
MBI14_g18952_MAGBIO Magnolia biondii HOM05D005669 ORTHO05D007632 5.9e-32 141.4 146 51.4
PSO357G0659 Papaver somniferum HOM05D005669 ORTHO05D007632 7.8e-32 141.0 114 65.8
PSO541G5566 Papaver somniferum HOM05D005669 ORTHO05D007632 1.7e-31 139.8 145 55.2
Potri.002G006100 Populus trichocarpa HOM05D005669 ORTHO05D007632 1.7e-31 139.8 141 51.1
PSO675G5095 Papaver somniferum HOM05D005669 ORTHO05D007632 3.0e-31 139.0 145 55.2
PSO170G6908 Papaver somniferum HOM05D005669 ORTHO05D007632 3.9e-31 138.7 114 64.9
Aqoxy6G01556 Aquilegia oxysepala HOM05D005669 ORTHO05D007632 6.6e-31 137.9 136 55.9
Atru.chr13.76 Acer truncatum HOM05D005669 ORTHO05D007632 8.6e-31 137.5 141 52.5
Cpa.g.sc26.145 Carica papaya HOM05D005669 ORTHO05D007632 8.6e-31 137.5 142 50.0
QL02p015311 Quercus lobata HOM05D005669 ORTHO05D007632 8.6e-31 137.5 120 57.5
Sabra02G0004300 Salix brachista HOM05D005669 ORTHO05D007632 1.1e-30 137.1 141 50.4
Actinidia37907 Actinidia chinensis HOM05D005669 ORTHO05D007632 2.5e-30 136.0 115 62.6
COL.COLO4_36509 Corchorus olitorius HOM05D005669 ORTHO05D007632 4.3e-30 135.2 124 58.1
Ciclev10000240m.g Citrus clementina HOM05D005669 ORTHO05D007632 2.8e-29 132.5 144 49.3
Cfa014128 Carpinus fangiana HOM05D005669 ORTHO05D007632 6.2e-29 131.3 147 51.0
Duzib093G1476 Durio zibethinus HOM05D005669 ORTHO05D007632 1.0e-28 130.6 125 54.4
Gohir.A04G091400 Gossypium hirsutum HOM05D005669 ORTHO05D007632 2.3e-28 129.4 123 56.1
Potri.005G255500 Populus trichocarpa HOM05D005669 ORTHO05D007632 2.3e-28 129.4 133 51.1
Haze_22850 Corylus avellana HOM05D005669 ORTHO05D007632 3.1e-28 129.0 121 57.0
Gorai.012G107400 Gossypium raimondii HOM05D005669 ORTHO05D007632 3.1e-28 129.0 123 56.1
FvH4_2g26870 Fragaria vesca HOM05D005669 ORTHO05D007632 4.0e-28 128.6 144 52.8
Gohir.D04G124200 Gossypium hirsutum HOM05D005669 ORTHO05D007632 8.9e-28 127.5 123 55.3
FAN20G0946 Fragaria x ananassa HOM05D005669 ORTHO05D007632 1.5e-27 126.7 144 52.1
RcHm_v2.0_Chr6g0295721 Rosa chinensis HOM05D005669 ORTHO05D007632 2.0e-27 126.3 150 51.3
Prupe.1G498000 Prunus persica HOM05D005669 ORTHO05D007632 3.4e-27 125.6 143 49.0
FAN27G1463 Fragaria x ananassa HOM05D005669 ORTHO05D007632 9.8e-27 124.0 144 51.4
AUR62035163 Chenopodium quinoa HOM05D005669 ORTHO05D007632 3.7e-26 122.1 139 49.6
TWI12G0088 Tripterygium wilfordii HOM05D005669 ORTHO05D007632 3.7e-26 122.1 141 46.1
TWI56G0116 Tripterygium wilfordii HOM05D005669 ORTHO05D007632 6.4e-26 121.3 141 47.5
Sabra05G0198000 Salix brachista HOM05D005669 ORTHO05D007632 8.3e-26 120.9 133 49.6
Sc26g0004730 Simmondsia chinensis HOM05D005669 ORTHO05D007632 1.4e-25 120.2 138 48.6
AUR62024103 Chenopodium quinoa HOM05D005669 ORTHO05D007632 5.4e-25 118.2 139 48.2
vmacro04423 Vaccinium macrocarpon HOM05D005669 ORTHO05D007632 1.2e-24 117.1 125 56.0
Ah.11g045150 Amaranthus hybridus HOM05D005669 ORTHO05D007632 2.0e-24 116.3 139 51.8
CsaV3_4G037550 Cucumis sativus L. HOM05D005669 ORTHO05D007632 2.0e-24 116.3 145 50.3
MELO3C017049.2 Cucumis melo HOM05D005669 ORTHO05D007632 7.8e-24 114.4 145 49.7
Lsat_1_v5_gn_2_2161 Lactuca sativa HOM05D005669 ORTHO05D007632 7.8e-24 114.4 141 40.4
EL10Ac1g01890 Beta vulgaris HOM05D005669 ORTHO05D007632 1.7e-23 113.2 146 44.5
ClCG11G018950 Citrullus lanatus HOM05D005669 ORTHO05D007632 2.3e-23 112.8 144 49.3
Cc10_g00330 Coffea canephora HOM05D005669 ORTHO05D007632 3.9e-23 112.1 137 44.5
Eucgr.F03586 Eucalyptus grandis HOM05D005669 ORTHO05D007632 6.6e-23 111.3 146 45.9
ECA238G3105 Erigeron canadensis HOM05D005669 ORTHO05D007632 3.3e-22 109.0 138 44.2
Ca_17223_v3 Cicer arietinum L. HOM05D005669 ORTHO05D007632 1.6e-21 106.7 144 45.1
Psat7g004160 Pisum sativum HOM05D005669 ORTHO05D007632 2.1e-21 106.3 143 42.7
DCAR_020086 Daucus carota HOM05D005669 ORTHO05D007632 2.8e-21 105.9 138 42.0
VMungo0251G0358 Vigna mungo HOM05D005669 ORTHO05D007632 2.8e-21 105.9 140 43.6
MSTRG.22085 Avicennia marina HOM05D005669 ORTHO05D007632 3.6e-21 105.5 132 45.5
Lj2g0000882 Lotus japonicus HOM05D005669 ORTHO05D007632 6.2e-21 104.8 120 49.2
Medtr8g106680 Medicago truncatula HOM05D005669 ORTHO05D007632 8.1e-21 104.4 144 41.7
PGR031G0991 Punica granatum HOM05D005669 ORTHO05D007632 8.1e-21 104.4 146 44.5
Lj4g0027418 Lotus japonicus HOM05D005669 ORTHO05D007632 1.4e-20 103.6 142 46.5
Peaxi162Scf00463g00035 Petunia axillaris HOM05D005669 ORTHO05D007632 2.3e-20 102.8 121 48.8
MSTRG.24914 Avicennia marina HOM05D005669 ORTHO05D007632 3.1e-20 102.4 132 45.5
CSS0001195 Camellia sinensis var. sinensis HOM05D005669 ORTHO05D007632 3.1e-20 102.4 141 46.1
Glyma.05G243200 Glycine max HOM05D005669 ORTHO05D007632 4.0e-20 102.1 145 42.8
HanXRQChr14g0427911 Helianthus annuus HOM05D005669 ORTHO05D007632 4.0e-20 102.1 121 46.3
TPR.G12831 Trifolium pratense HOM05D005669 ORTHO05D007632 4.0e-20 102.1 150 41.3
Psat1g033840 Pisum sativum HOM05D005669 ORTHO05D007632 6.8e-20 101.3 129 44.2
VMungo0464G1382 Vigna mungo HOM05D005669 ORTHO05D007632 6.8e-20 101.3 123 46.3
Phvul.004G130100 Phaseolus vulgaris HOM05D005669 ORTHO05D007632 1.2e-19 100.5 126 46.0
Atru.chr13.287 Acer truncatum HOM05D005669 ORTHO05D007632 1.5e-19 100.1 120 46.7
TPR.G7965 Trifolium pratense HOM05D005669 ORTHO05D007632 2.0e-19 99.8 131 42.0
Phvul.002G326900 Phaseolus vulgaris HOM05D005669 ORTHO05D007632 3.4e-19 99.0 141 44.0
Solyc10g006330.3 Solanum lycopersicum HOM05D005669 ORTHO05D007632 3.4e-19 99.0 121 47.9
Sopen10g002280 Solanum pennellii HOM05D005669 ORTHO05D007632 4.4e-19 98.6 121 47.9
Glyma.08G051000 Glycine max HOM05D005669 ORTHO05D007632 5.8e-19 98.2 141 41.8
Glyma.09G155700 Glycine max HOM05D005669 ORTHO05D007632 9.8e-19 97.4 124 46.0
PGSC0003DMG400014391 Solanum tuberosum HOM05D005669 ORTHO05D007632 1.3e-18 97.1 121 47.1
Medtr6g080430 Medicago truncatula HOM05D005669 ORTHO05D007632 1.7e-18 96.7 124 42.7
MD08G1162900 Malus domestica HOM05D005669 ORTHO05D007632 2.2e-18 96.3 100 52.0
Nitab4.5_0012070g0010 Nicotiana tabacum HOM05D005669 ORTHO05D007632 2.2e-18 96.3 121 46.3
MSTRG.1001 Avicennia marina HOM05D005669 ORTHO05D007632 2.9e-18 95.9 132 43.2
Nitab4.5_0000119g0330 Nicotiana tabacum HOM05D005669 ORTHO05D007632 2.9e-18 95.9 121 45.5
CAN.G1781.6 Capsicum annuum HOM05D005669 ORTHO05D007632 3.7e-18 95.5 143 44.1
Ca_25308_v3 Cicer arietinum L. HOM05D005669 ORTHO05D007632 3.7e-18 95.5 126 44.4
Lalb_Chr24g0398011 Lupinus albus HOM05D005669 ORTHO05D007632 3.7e-18 95.5 125 42.4
arahy.Tifrunner.gnm1.ann1.7LZL5F Arachis hypogaea HOM05D005669 ORTHO05D007632 6.4e-18 94.7 144 40.3
Glyma.16G206400 Glycine max HOM05D005669 ORTHO05D007632 1.4e-17 93.6 124 42.7
Lalb_Chr05g0221901 Lupinus albus HOM05D005669 ORTHO05D007632 1.4e-17 93.6 146 41.1
Sed0011906 Sechium edule HOM05D005669 ORTHO05D007632 1.9e-17 93.2 136 47.1
arahy.Tifrunner.gnm1.ann1.Y01VEH Arachis hypogaea HOM05D005669 ORTHO05D007632 3.2e-17 92.4 144 41.0
Migut.C00359 Erythranthe guttata HOM05D005669 ORTHO05D007632 3.2e-17 92.4 134 44.0
Ah.03g148520 Amaranthus hybridus HOM05D005669 ORTHO05D026298 4.1e-17 92.0 96 53.1
unitig_32.g11141 Utricularia gibba HOM05D005669 ORTHO05D007632 2.1e-16 89.7 132 42.4
CANSAT56G1505 Cannabis sativa HOM05D005669 ORTHO05D007632 2.7e-16 89.4 132 40.2
BcaC07g37454 Brassica carinata HOM05D005669 ORTHO05D007632 3.9e-15 85.5 141 37.6
A08p07670 Brassica napus HOM05D005669 ORTHO05D007632 3.9e-15 85.5 141 37.6
BolC8t47774H Brassica oleracea HOM05D005669 ORTHO05D007632 3.9e-15 85.5 141 37.6
BraA08t32781Z Brassica rapa HOM05D005669 ORTHO05D007632 3.9e-15 85.5 141 37.6
C08p09250 Brassica napus HOM05D005669 ORTHO05D007632 5.1e-15 85.1 141 37.6
AL1G51380 Arabidopsis lyrata HOM05D005669 ORTHO05D007632 8.6e-15 84.3 141 36.9
Thhalv10003646m.g Eutrema salsugineum HOM05D005669 ORTHO05D007632 1.1e-14 84.0 141 37.6
HPP92_009984 Vanilla planifolia HOM05D005669 ORTHO05D007632 1.5e-14 83.6 146 42.5
BcaB04g17779 Brassica carinata HOM05D005669 ORTHO05D007632 2.5e-14 82.8 141 36.9
Os09g0553900 Oryza sativa ssp. japonica HOM05D005669 ORTHO05D007632 3.3e-14 82.4 141 38.3
SalBow7G1312 Salvia bowleyana HOM05D005669 ORTHO05D007632 3.3e-14 82.4 134 38.8
Sp1g37310 Schrenkiella parvula HOM05D005669 ORTHO05D007632 4.3e-14 82.0 141 37.6
THA.LOC104813177 Tarenaya hassleriana HOM05D005669 ORTHO05D007632 7.3e-14 81.3 145 38.6
Aa31sc286G30 Aethionema arabicum HOM05D005669 ORTHO05D007632 2.1e-13 79.7 134 37.3
AT1G42550 Arabidopsis thaliana HOM05D005669 ORTHO05D007632 2.1e-13 79.7 141 35.5
CARHR035190 Cardamine hirsuta HOM05D005669 ORTHO05D007632 2.1e-13 79.7 141 35.5
Os10g0539700 Oryza sativa ssp. japonica HOM05D005669 ORTHO05D007632 2.3e-12 76.3 139 40.3
SGA_v2.0_scaffold26G11216 Striga asiatica HOM05D005669 ORTHO05D007632 1.5e-11 73.6 139 35.3
ATR0807G083 Amborella trichopoda HOM05D005669 ORTHO05D007632 2.0e-11 73.2 150 38.0
Zm00001eb320750 Zea mays HOM05D005669 ORTHO05D007632 2.0e-11 73.2 141 36.2
Lj4P811T82 Lonicera japonica HOM05D005669 ORTHO05D007632 2.2e-10 69.7 90 44.4
Actinidia33594 Actinidia chinensis HOM05D005669 ORTHO05D026298 1.1e-09 67.4 68 54.4
CDE05G3319 Ceratophyllum demersum HOM05D005669 ORTHO05D007632 3.2e-09 65.9 142 31.7
Carub.0001s3430 Capsella rubella HOM05D005669 ORTHO05D007632 5.4e-09 65.1 141 32.6
CDE05G3677 Ceratophyllum demersum HOM05D005669 ORTHO05D007632 7.1e-09 64.7 135 34.8
Lj7A246T30 Lonicera japonica HOM05D002422 ORTHO05D002569 1.0e-07 60.8 173 26.6
GSVIVG01035425001 Vitis vinifera HOM05D002422 ORTHO05D002569 3.9e-07 58.9 172 26.7
unitig_749.g13833 Utricularia gibba HOM05D002422 ORTHO05D002569 5.1e-07 58.5 125 28.8
CDE02G2157 Ceratophyllum demersum HOM05D005669 ORTHO05D026298 4.3e-06 55.5 106 34.0
Oeu000305.2 Olea europaea HOM05D002422 ORTHO05D002569 7.3e-06 54.7 174 26.4
HanXRQChr03g0071421 Helianthus annuus HOM05D002422 ORTHO05D002569 9.6e-06 54.3 99 32.3


User provided reference genes

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