Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.1e-177 625.5 312 100.0
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.0e-107 394.0 284 68.7
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 2.3e-107 392.9 271 72.7
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.0e-106 389.8 295 66.1
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.8e-104 383.3 294 65.0
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 1.1e-101 374.0 295 63.7
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 7.2e-101 371.3 297 63.0
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 4.7e-100 368.6 288 59.0
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 1.8e-99 366.7 293 63.5
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 3.0e-99 365.9 293 64.2
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 8.8e-99 364.4 293 63.1
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 6.3e-97 358.2 304 60.9
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 6.3e-97 358.2 297 61.3
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 5.3e-96 355.1 294 61.6
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 1.6e-95 353.6 279 64.5
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 1.6e-95 353.6 304 60.5
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 2.0e-95 353.2 286 63.3
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 3.8e-94 349.0 294 60.5
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 6.5e-94 348.2 284 61.3
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 1.1e-93 347.4 300 61.7
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 1.9e-93 346.7 294 60.5
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 5.5e-93 345.1 307 57.7
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 7.2e-93 344.7 300 60.0
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 1.0e-91 340.9 296 62.5
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 1.4e-91 340.5 312 59.3
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 3.0e-91 339.3 296 61.8
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 6.8e-91 338.2 298 58.1
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 6.8e-91 338.2 285 59.6
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 1.5e-90 337.0 293 55.6
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 2.0e-90 336.7 276 60.9
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 2.2e-89 333.2 279 60.6
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 3.7e-89 332.4 297 59.6
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 6.3e-89 331.6 303 58.7
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.1e-88 330.9 291 58.1
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 1.8e-88 330.1 303 57.1
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 3.1e-88 329.3 297 58.9
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 4.1e-88 328.9 301 56.8
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 5.4e-88 328.6 282 57.8
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 1.2e-87 327.4 278 59.4
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.0e-87 326.6 291 57.4
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 7.7e-87 324.7 302 59.9
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 2.2e-86 323.2 283 57.2
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 2.9e-86 322.8 291 57.0
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 1.4e-83 313.9 298 55.0
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 4.0e-83 312.4 309 55.3
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 4.0e-83 312.4 283 56.9
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 3.4e-82 309.3 310 52.3
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 1.7e-81 307.0 287 56.1
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 4.9e-81 305.4 292 56.5
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 4.9e-81 305.4 280 58.9
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 8.3e-81 304.7 315 52.7
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 3.5e-79 299.3 281 56.9
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 6.6e-78 295.0 299 51.5
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 2.1e-76 290.0 284 51.8
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.3e-75 286.6 276 55.8
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 6.8e-75 285.0 276 55.4
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.4e-74 282.7 265 57.4
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 7.5e-74 281.6 293 52.9
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.9e-73 279.6 276 54.3
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 4.9e-73 278.9 289 51.6
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 9.5e-69 264.6 206 64.6
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 2.8e-60 236.5 234 53.0
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 1.3e-57 227.6 278 46.4
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 6.0e-55 218.8 161 66.5
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 1.3e-46 191.0 132 68.9
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 2.2e-41 173.7 161 55.3
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 1.9e-37 160.6 117 68.4
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.2e-34 151.4 232 42.7
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 5.4e-32 142.5 498 26.5
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 1.2e-26 124.8 300 37.3
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 3.8e-25 119.8 79 72.2
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.5e-18 97.8 120 45.8
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 5.8e-18 95.9 105 53.3
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 2.5e-13 80.5 56 66.1


User provided reference genes

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