Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 4.4e-244 847.4 403 100.0
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 6.4e-227 790.4 402 93.0
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 3.6e-222 774.6 401 91.0
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 4.2e-218 761.1 403 88.6
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 4.2e-218 761.1 403 89.8
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 1.2e-217 759.6 402 89.6
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 1.2e-217 759.6 402 90.0
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.1e-217 758.8 404 90.3
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 1.8e-216 755.7 403 88.8
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 3.0e-216 755.0 404 89.9
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 3.9e-216 754.6 403 89.1
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 4.3e-215 751.1 403 88.1
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 3.7e-214 748.0 415 88.0
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 8.1e-214 746.9 402 87.8
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 1.1e-213 746.5 403 88.8
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 1.4e-213 746.1 401 87.3
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 4.0e-213 744.6 402 87.8
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 5.3e-213 744.2 402 86.8
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 2.0e-212 742.3 403 87.8
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 2.0e-212 742.3 403 87.8
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 2.0e-212 742.3 405 86.9
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 7.6e-212 740.3 409 85.6
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 7.6e-212 740.3 390 91.0
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 1.0e-211 740.0 405 87.2
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.0e-211 740.0 402 87.3
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.3e-211 739.6 402 88.3
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 1.3e-211 739.6 401 88.8
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 1.7e-211 739.2 400 88.2
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 2.9e-211 738.4 404 86.4
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 3.8e-211 738.0 403 88.1
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 6.5e-211 737.3 403 88.1
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 8.4e-211 736.9 403 87.6
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 8.4e-211 736.9 401 87.8
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 8.4e-211 736.9 402 86.8
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 1.4e-210 736.1 405 86.7
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 1.4e-210 736.1 403 87.3
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 1.4e-210 736.1 403 87.3
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 1.4e-210 736.1 404 86.6
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 2.5e-210 735.3 418 84.2
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 3.2e-210 734.9 403 86.6
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 4.2e-210 734.6 401 85.3
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 1.2e-209 733.0 403 87.8
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.2e-209 733.0 405 85.9
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 2.1e-209 732.3 405 85.9
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 2.7e-209 731.9 403 85.9
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 1.0e-208 729.9 405 86.4
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 1.0e-208 729.9 391 88.5
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 1.3e-208 729.6 402 87.1
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 3.0e-208 728.4 403 86.1
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 5.1e-208 727.6 406 85.7
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 6.7e-208 727.2 401 85.0
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 1.1e-207 726.5 402 86.8
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 1.5e-207 726.1 405 85.7
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 7.4e-207 723.8 401 84.8
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.3e-206 723.0 402 85.6
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 2.8e-206 721.8 410 84.9
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 3.1e-205 718.4 403 84.4
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 5.3e-205 717.6 414 83.8
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 6.9e-205 717.2 434 80.9
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 1.2e-204 716.5 396 84.6
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 3.4e-204 714.9 390 87.2
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 3.4e-204 714.9 395 86.1
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 1.3e-203 713.0 404 82.4
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.7e-203 712.6 403 84.1
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 2.9e-203 711.8 390 86.2
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 2.9e-203 711.8 397 85.1
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 3.8e-203 711.4 410 83.7
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 1.1e-202 709.9 403 82.1
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.1e-202 709.9 404 82.4
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.4e-202 709.5 399 84.0
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.9e-202 709.1 403 82.4
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 3.2e-202 708.4 415 82.4
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 4.2e-202 708.0 403 82.9
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 6.1e-201 704.1 389 85.6
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 7.9e-201 703.7 401 84.5
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 7.9e-201 703.7 432 78.9
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 1.3e-200 703.0 405 84.0
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 8.7e-200 700.3 401 84.0
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 3.3e-199 698.4 401 84.5
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 4.3e-199 698.0 397 83.1
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 1.3e-198 696.4 400 83.2
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 1.6e-198 696.0 404 81.7
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 2.8e-198 695.3 402 82.1
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 3.1e-197 691.8 391 83.9
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 8.5e-195 683.7 420 80.5
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 1.4e-194 682.9 403 79.4
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 3.2e-194 681.8 387 83.5
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 7.2e-194 680.6 386 82.4
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 7.2e-194 680.6 386 82.4
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 6.7e-192 674.1 403 79.4
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 1.1e-191 673.3 388 82.0
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 2.8e-190 668.7 380 83.4
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.1e-189 666.8 403 81.4
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 6.9e-189 664.1 385 81.6
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.0e-187 660.2 357 86.8
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 5.0e-187 657.9 409 77.5
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 7.2e-186 654.1 366 84.7
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 1.8e-184 649.4 387 78.8
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 3.9e-184 648.3 387 78.6
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 1.5e-183 646.4 399 77.4
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 3.3e-183 645.2 387 78.0
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 3.3e-183 645.2 410 78.8
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 2.2e-182 642.5 402 78.1
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 2.4e-181 639.0 403 78.7
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 5.0e-179 631.3 375 78.9
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 3.6e-177 625.2 341 86.2
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 5.0e-171 604.7 356 79.8
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 4.2e-170 601.7 393 71.5
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 1.2e-167 593.6 396 70.5
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 2.6e-167 592.4 325 84.6
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 2.4e-165 585.9 399 70.4
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 4.1e-165 585.1 395 72.9
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 2.2e-163 579.3 394 68.0
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.1e-162 577.0 305 90.2
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 1.4e-157 560.1 306 87.3
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 7.7e-156 554.3 345 76.8
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.7e-153 545.0 306 85.9
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 5.7e-151 538.1 400 64.5
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 7.0e-149 531.2 396 64.1
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 7.6e-119 431.4 242 85.1
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 4.3e-106 389.0 266 68.0
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 7.9e-100 368.2 208 84.6
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 3.9e-91 339.3 186 83.9
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 6.5e-86 322.0 171 88.3
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 9.3e-85 318.2 218 76.1
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 9.3e-85 318.2 371 51.5
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 3.4e-79 299.7 224 64.7
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.3e-78 297.7 159 85.5
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.5e-77 293.5 436 39.7
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 7.7e-71 271.9 146 87.0
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 2.1e-60 237.3 144 78.5
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 2.0e-58 230.7 173 63.6
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 5.5e-45 186.0 189 55.0
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 6.0e-31 139.4 72 90.3
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 2.3e-22 110.9 201 40.3
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 6.4e-17 92.8 272 30.9
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 2.1e-07 61.2 51 60.8


User provided reference genes

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