Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.2e-99 366.7 216 100.0
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 9.6e-36 154.5 216 50.9
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 2.2e-32 143.3 191 55.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 6.4e-32 141.7 208 50.5
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 4.8e-27 125.6 157 52.2
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 1.1e-26 124.4 224 44.6
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.2e-25 120.9 215 43.3
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 1.5e-25 120.6 160 49.4
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 2.0e-25 120.2 176 50.0
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 2.0e-25 120.2 199 45.7
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 3.4e-25 119.4 169 53.3
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 1.3e-24 117.5 149 53.7
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 2.9e-24 116.3 224 49.6
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 6.4e-24 115.2 195 45.1
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 5.5e-23 112.1 211 44.1
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 3.5e-22 109.4 222 44.1
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 3.0e-21 106.3 195 44.1
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 6.7e-21 105.1 173 45.7
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 6.7e-21 105.1 215 41.4
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.9e-20 103.6 193 45.6
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 2.5e-20 103.2 174 48.9
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 9.6e-20 101.3 212 38.7
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 9.6e-20 101.3 208 40.4
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 1.3e-19 100.9 123 61.8
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 1.3e-19 100.9 222 33.3
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 6.2e-19 98.6 132 57.6
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 8.1e-19 98.2 218 40.4
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 1.1e-18 97.8 181 44.8
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 1.4e-18 97.4 174 50.0
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 4.0e-18 95.9 224 33.9
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 4.0e-18 95.9 212 35.4
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 6.9e-18 95.1 172 40.7
Actinidia10351 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.2e-17 94.4 197 47.7
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 2.6e-17 93.2 225 40.4
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 2.6e-17 93.2 215 35.8
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 3.4e-17 92.8 147 52.4
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 5.8e-17 92.0 215 37.2
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 7.6e-17 91.7 171 36.8
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 7.6e-17 91.7 218 41.7
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 2.2e-16 90.1 220 42.7
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 4.9e-16 89.0 179 42.5
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 4.9e-16 89.0 217 32.3
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 4.9e-16 89.0 209 34.9
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 8.4e-16 88.2 201 39.8
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 8.4e-16 88.2 209 34.4
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.1e-15 87.8 217 37.3
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 1.4e-15 87.4 173 48.6
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 1.4e-15 87.4 173 48.6
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 1.4e-15 87.4 128 55.5
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 1.4e-15 87.4 170 43.5
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 2.5e-15 86.7 220 36.8
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 3.2e-15 86.3 149 49.0
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 2.1e-14 83.6 183 41.5
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.7e-14 83.2 210 34.3
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 6.0e-14 82.0 161 41.0
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 6.0e-14 82.0 170 40.6
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 7.9e-14 81.6 150 34.0
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 7.9e-14 81.6 227 36.6
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 7.9e-14 81.6 136 46.3
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 1.3e-13 80.9 143 53.1
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 1.8e-13 80.5 162 33.3
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 1.8e-13 80.5 138 37.0
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 2.3e-13 80.1 211 40.3
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 3.9e-13 79.3 138 36.2
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 6.7e-13 78.6 189 41.3
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 6.7e-13 78.6 157 47.8
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 8.7e-13 78.2 141 44.0
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 8.7e-13 78.2 123 48.8
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 8.7e-13 78.2 178 32.0
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.5e-12 77.4 157 44.6
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.5e-12 77.4 138 39.9
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.9e-12 77.0 139 42.4
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.9e-12 77.0 114 53.5
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 1.9e-12 77.0 147 46.9
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.5e-12 76.6 216 38.0
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.5e-12 76.6 140 44.3
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.3e-12 76.3 122 38.5
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 7.4e-12 75.1 128 46.1
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 1.3e-11 74.3 161 34.2
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 1.3e-11 74.3 180 28.9
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.6e-11 73.9 167 38.3
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 2.1e-11 73.6 208 36.5
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.8e-11 73.2 143 45.5
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 2.8e-11 73.2 162 41.4
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 3.7e-11 72.8 222 34.7
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 3.7e-11 72.8 136 46.3
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 1.4e-10 70.9 167 36.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.8e-10 70.5 129 46.5
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 2.4e-10 70.1 148 39.2
ClCG09G015950 Citrullus lanatus HOM05D007310 ORTHO05D002375 2.4e-10 70.1 110 56.4
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.1e-10 69.3 125 47.2
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 4.1e-10 69.3 112 53.6
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.9e-10 68.6 137 45.3
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 6.9e-10 68.6 140 40.0
MELO3C018616.2 Cucumis melo HOM05D007310 ORTHO05D002375 9.0e-10 68.2 127 50.4
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 9.0e-10 68.2 133 43.6
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.2e-09 67.8 185 37.3
Gorai.005G224000 Gossypium raimondii HOM05D007310 ORTHO05D002375 2.6e-09 66.6 129 46.5
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.4e-09 66.2 147 35.4
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 4.5e-09 65.9 186 36.0
TAR376G0070 Trochodendron aralioides HOM05D015253 ORTHO05D002375 7.6e-09 65.1 142 29.6
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 7.6e-09 65.1 180 35.0
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 1.3e-08 64.3 144 44.4
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 2.2e-08 63.5 130 43.1
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.8e-08 62.8 137 39.4
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 5.0e-08 62.4 172 34.3
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 5.0e-08 62.4 67 49.3
CsaV3_7G006790 Cucumis sativus L. HOM05D007310 ORTHO05D002375 6.5e-08 62.0 110 52.7
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 6.5e-08 62.0 142 29.6
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 8.5e-08 61.6 172 40.1
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 1.1e-07 61.2 119 30.3
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 1.4e-07 60.8 107 34.6
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.4e-07 60.8 134 35.8
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 1.4e-07 60.8 67 47.8
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.9e-07 60.5 147 34.0
MBI02_g10701_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 2.5e-07 60.1 127 47.2
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 2.5e-07 60.1 159 42.1
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 4.2e-07 59.3 122 43.4
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 7.2e-07 58.5 68 52.9
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 7.2e-07 58.5 155 32.9
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 9.3e-07 58.2 135 42.2
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-06 57.8 198 35.9
Atru.chr6.1219 Acer truncatum HOM05D058201 ORTHO05D037924 1.6e-06 57.4 80 45.0
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.6e-06 57.4 66 51.5
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.6e-06 57.4 127 43.3
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.6e-06 57.4 121 41.3
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.7e-06 56.6 124 44.4
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.7e-06 56.6 127 42.5
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 4.6e-06 55.8 120 39.2
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 4.6e-06 55.8 137 24.1
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 4.6e-06 55.8 146 40.4
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.1e-06 55.5 155 41.9
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.1e-06 55.5 127 42.5
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 6.1e-06 55.5 118 45.8
Cc07_g14530 Coffea canephora HOM05D004728 ORTHO05D002375 7.9e-06 55.1 167 38.3


User provided reference genes

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