Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 3.3e-105 385.2 211 100.0
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 4.7e-80 301.6 206 76.7
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 3.1e-71 272.3 208 69.7
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 2.0e-70 269.6 208 70.2
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 2.0e-70 269.6 208 70.7
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 3.4e-70 268.9 198 72.2
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.2e-69 266.2 208 68.3
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 2.2e-69 266.2 208 68.3
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 2.8e-64 249.2 208 64.4
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 2.8e-64 249.2 210 64.3
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 3.6e-64 248.8 212 63.2
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 6.2e-64 248.1 208 64.9
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.4e-63 246.9 208 64.4
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 3.1e-63 245.7 208 63.5
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 4.0e-63 245.4 206 65.0
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 5.3e-63 245.0 208 62.5
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 2.0e-62 243.0 210 63.3
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 2.6e-62 242.7 206 64.6
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 2.6e-62 242.7 210 64.8
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 5.8e-62 241.5 206 63.6
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 7.6e-62 241.1 211 62.1
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.3e-61 240.4 209 63.2
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 2.2e-61 239.6 208 62.5
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 2.9e-61 239.2 210 62.4
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 6.4e-61 238.0 210 62.4
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 6.4e-61 238.0 210 62.4
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 8.4e-61 237.7 211 62.1
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 8.4e-61 237.7 209 63.2
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 1.1e-60 237.3 211 63.5
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.1e-60 237.3 208 62.0
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 1.1e-60 237.3 211 61.1
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 1.4e-60 236.9 209 62.7
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 1.9e-60 236.5 208 61.1
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.9e-60 236.5 210 61.9
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.4e-60 236.1 209 62.7
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 2.4e-60 236.1 210 61.9
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 4.2e-60 235.3 210 59.0
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 5.4e-60 235.0 211 62.1
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 5.4e-60 235.0 209 63.2
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 7.1e-60 234.6 208 58.7
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 9.3e-60 234.2 210 61.9
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 9.3e-60 234.2 208 60.1
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 1.2e-59 233.8 210 61.9
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 2.7e-59 232.6 208 58.7
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 6.0e-59 231.5 206 61.7
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 1.0e-58 230.7 211 60.7
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 1.0e-58 230.7 213 59.6
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 1.8e-58 229.9 209 61.7
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 1.8e-58 229.9 210 60.0
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 2.3e-58 229.6 210 60.5
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 3.0e-58 229.2 208 57.7
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 5.1e-58 228.4 208 60.6
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 1.5e-57 226.9 210 58.6
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 2.5e-57 226.1 207 58.5
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 4.3e-57 225.3 210 59.5
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 5.6e-57 224.9 209 61.7
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 1.3e-56 223.8 200 58.5
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 2.1e-56 223.0 210 56.2
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 6.2e-56 221.5 210 60.0
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 8.1e-56 221.1 212 57.5
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 1.1e-55 220.7 210 59.5
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.8e-55 219.9 210 59.0
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.4e-55 219.5 209 60.8
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 2.4e-55 219.5 205 60.5
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 5.3e-55 218.4 210 55.2
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 9.0e-55 217.6 209 57.9
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 2.6e-54 216.1 210 55.2
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 5.8e-54 214.9 208 55.8
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 7.6e-54 214.5 199 58.3
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 1.3e-53 213.8 209 58.4
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.7e-53 213.4 207 57.5
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 4.9e-53 211.8 207 58.9
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 6.5e-53 211.5 214 55.6
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 1.1e-52 210.7 210 56.7
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 1.4e-52 210.3 210 54.8
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.5e-52 209.5 210 56.7
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 4.2e-52 208.8 211 55.9
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 4.2e-52 208.8 199 58.3
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 5.5e-52 208.4 218 53.7
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.2e-51 207.2 212 53.3
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 1.2e-51 207.2 208 54.8
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 1.2e-51 207.2 178 64.6
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 1.2e-51 207.2 209 53.6
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 3.5e-51 205.7 212 53.8
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 6.0e-51 204.9 214 53.3
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 7.9e-51 204.5 212 54.2
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.0e-50 204.1 209 57.4
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.3e-50 203.8 212 56.1
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 2.3e-50 203.0 208 52.9
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 2.3e-50 203.0 210 52.9
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.3e-50 203.0 214 55.6
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 3.0e-50 202.6 215 53.5
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 1.5e-49 200.3 217 54.4
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 1.5e-49 200.3 209 52.6
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 4.3e-49 198.7 208 54.8
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.3e-48 197.2 199 55.8
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 1.3e-48 197.2 209 52.6
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.6e-48 196.8 212 53.8
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 3.7e-48 195.7 210 51.9
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 6.2e-48 194.9 215 50.7
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 2.4e-47 193.0 211 53.1
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 2.4e-47 193.0 209 56.0
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 3.1e-47 192.6 201 54.7
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 9.0e-47 191.0 204 51.5
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 7.6e-46 188.0 210 51.0
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 1.7e-45 186.8 207 52.2
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 1.1e-44 184.1 214 48.6
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 1.4e-44 183.7 209 49.3
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 2.7e-43 179.5 208 49.5
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 2.7e-43 179.5 212 49.1
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 3.5e-43 179.1 199 51.3
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 6.1e-43 178.3 217 47.5
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 1.0e-42 177.6 200 50.5
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 1.0e-42 177.6 205 49.8
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 2.3e-42 176.4 207 48.8
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 3.9e-42 175.6 206 49.5
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 3.9e-42 175.6 209 50.7
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 4.3e-41 172.2 213 48.4
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 2.2e-40 169.9 138 63.8
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 3.7e-40 169.1 215 48.4
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 6.3e-40 168.3 196 49.0
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 6.3e-40 168.3 196 49.0
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 1.1e-39 167.5 198 49.5
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 1.4e-39 167.2 213 46.9
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 1.8e-39 166.8 194 51.0
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 2.4e-39 166.4 196 49.0
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 2.4e-39 166.4 160 56.2
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 4.1e-39 165.6 183 49.7
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 4.1e-39 165.6 218 46.3
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 5.3e-39 165.2 196 49.0
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.4e-38 162.5 190 50.0
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 3.4e-38 162.5 208 45.2
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 4.5e-38 162.2 190 48.9
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 4.5e-38 162.2 211 48.8
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 4.5e-38 162.2 206 46.6
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 6.5e-37 158.3 208 45.2
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 6.5e-37 158.3 206 47.6
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 5.5e-36 155.2 183 48.1
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 1.7e-32 143.7 213 43.7
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 8.2e-32 141.4 143 53.8
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 2.4e-31 139.8 211 42.7
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 5.3e-31 138.7 216 41.2
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.2e-30 137.5 215 42.8
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 1.2e-30 137.5 212 41.5
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 5.5e-28 128.6 193 43.0
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 7.9e-27 124.8 139 51.8
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 2.3e-26 123.2 114 58.8
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 5.7e-25 118.6 116 56.0
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 5.7e-25 118.6 181 41.4
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 3.7e-24 115.9 138 48.6
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 2.4e-23 113.2 202 36.6
CSS0037477 Camellia sinensis var. sinensis HOM05D000739 ORTHO05D109703 5.7e-09 65.5 84 48.8
Phvul.008G182701 Phaseolus vulgaris HOM05D004648 ORTHO05D307582 9.8e-09 64.7 87 44.8
FAN28G2101 Fragaria x ananassa HOM05D004648 ORTHO05D005782 1.4e-07 60.8 55 58.2
BolC6t39019H Brassica oleracea HOM05D004648 ORTHO05D031748 9.1e-07 58.2 63 47.6


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