Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0121 Trochodendron aralioides HOM05D014619 ORTHO05D010925 5.1e-185 651.0 338 100.0
TAR101G0004 Trochodendron aralioides HOM05D000194 ORTHO05D000069 4.9e-63 245.7 158 84.2
TAR381G1695 Trochodendron aralioides HOM05D000194 ORTHO05D000069 2.0e-43 180.6 158 62.7
TAR376G0525 Trochodendron aralioides HOM05D000194 ORTHO05D000069 6.7e-36 155.6 160 58.8
Actinidia34350 Actinidia chinensis HOM05D000194 ORTHO05D000069 2.2e-26 124.0 162 49.4
Actinidia00533 Actinidia chinensis HOM05D000194 ORTHO05D000069 1.7e-23 114.4 160 50.6
Dinv23511 Davidia involucrata HOM05D000194 ORTHO05D000069 1.7e-23 114.4 159 50.3
TAR203G0004 Trochodendron aralioides HOM05D014619 ORTHO05D010925 1.7e-23 114.4 112 61.6
TAR677G0006 Trochodendron aralioides HOM05D014619 ORTHO05D010925 1.7e-23 114.4 112 61.6
Rhsim11G0178500 Rhododendron simsii HOM05D000194 ORTHO05D000069 2.2e-23 114.0 172 45.3
vmacro02094 Vaccinium macrocarpon HOM05D000194 ORTHO05D000069 6.5e-23 112.5 173 47.4
CiPaw.06G134700 Carya illinoinensis HOM05D000194 ORTHO05D000069 8.5e-23 112.1 170 45.9
Thecc.02G083900 Theobroma cacao HOM05D000194 ORTHO05D000069 8.5e-23 112.1 168 47.6
Cfa004988 Carpinus fangiana HOM05D000194 ORTHO05D000069 1.5e-22 111.3 162 46.9
Hma1.2p1_0066F.1_g036290 Hydrangea macrophylla HOM05D000194 ORTHO05D000069 9.4e-22 108.6 170 45.9
Duzib132G0538 Durio zibethinus HOM05D000194 ORTHO05D000069 3.6e-21 106.7 168 45.2
Aqoxy5G01601 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 8.0e-21 105.5 168 45.8
GSVIVG01023783001 Vitis vinifera HOM05D000194 ORTHO05D000069 1.4e-20 104.8 161 47.8
Lj5A196T49 Lonicera japonica HOM05D000194 ORTHO05D000069 1.8e-20 104.4 172 44.8
Cpa.g.sc62.160 Carica papaya HOM05D000194 ORTHO05D000069 4.0e-20 103.2 161 46.0
MBI10_g18261_MAGBIO Magnolia biondii HOM05D000194 ORTHO05D000069 1.2e-19 101.7 157 45.9
Duzib248G1153 Durio zibethinus HOM05D000194 ORTHO05D000069 1.5e-19 101.3 167 43.7
Cc02_g17440 Coffea canephora HOM05D000194 ORTHO05D000069 4.4e-19 99.8 172 41.9
COL.COLO4_25945 Corchorus olitorius HOM05D000194 ORTHO05D000069 7.5e-19 99.0 167 44.9
Duzib052G0036 Durio zibethinus HOM05D000194 ORTHO05D000069 7.5e-19 99.0 168 42.9
Aqoxy6G01132 Aquilegia oxysepala HOM05D000194 ORTHO05D000069 1.3e-18 98.2 164 43.9
Atru.chr5.3033 Acer truncatum HOM05D000194 ORTHO05D000069 4.8e-18 96.3 161 42.9
TAR633G1247 Trochodendron aralioides HOM05D053444 ORTHO05D415680 4.8e-18 96.3 83 56.6
TWI79G0915 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 6.3e-18 95.9 185 40.5
Oeu061210.1 Olea europaea HOM05D000194 ORTHO05D000069 3.1e-17 93.6 169 40.8
RcHm_v2.0_Chr6g0264701 Rosa chinensis HOM05D000194 ORTHO05D000069 4.1e-17 93.2 133 47.4
Gorai.008G029300 Gossypium raimondii HOM05D000194 ORTHO05D000069 7.0e-17 92.4 164 40.9
Ciclev10028494m.g Citrus clementina HOM05D000194 ORTHO05D000069 9.1e-17 92.0 182 42.3
PSO731G0083 Papaver somniferum HOM05D000194 ORTHO05D000069 9.1e-17 92.0 184 41.8
Eucgr.I01279 Eucalyptus grandis HOM05D000194 ORTHO05D000069 1.2e-16 91.7 168 45.2
FAN24G1806 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.2e-16 91.7 133 46.6
FvH4_2g09030 Fragaria vesca HOM05D000194 ORTHO05D000069 1.6e-16 91.3 133 46.6
FAN15G2770 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.6e-16 91.3 153 43.1
FAN27G2861 Fragaria x ananassa HOM05D000194 ORTHO05D000069 1.6e-16 91.3 133 46.6
Gohir.A12G029400 Gossypium hirsutum HOM05D000194 ORTHO05D000069 2.7e-16 90.5 164 41.5
Nn1g04951 Nelumbo nucifera HOM05D000194 ORTHO05D000069 2.7e-16 90.5 137 47.4
PSO210G3820 Papaver somniferum HOM05D000194 ORTHO05D000069 2.7e-16 90.5 184 42.4
TWI31G0165 Tripterygium wilfordii HOM05D000194 ORTHO05D000069 5.9e-16 89.4 184 39.7
Eucgr.G01683 Eucalyptus grandis HOM05D000194 ORTHO05D000069 1.7e-15 87.8 195 39.0
Gohir.D13G032000 Gossypium hirsutum HOM05D000194 ORTHO05D000069 1.7e-15 87.8 165 41.2
Manes.11G086600 Manihot esculenta HOM05D000194 ORTHO05D000069 1.7e-15 87.8 173 43.4
AUR62011307 Chenopodium quinoa HOM05D000194 ORTHO05D000069 3.8e-15 86.7 168 41.7
Gohir.A13G033700 Gossypium hirsutum HOM05D000194 ORTHO05D000069 3.8e-15 86.7 193 37.3
FAN20G0474 Fragaria x ananassa HOM05D000194 ORTHO05D000069 5.0e-15 86.3 153 41.8
Ah.01g019290 Amaranthus hybridus HOM05D000194 ORTHO05D000069 6.5e-15 85.9 186 38.7
QL11p044710 Quercus lobata HOM05D000194 ORTHO05D000069 6.5e-15 85.9 166 41.0
Gorai.013G036400 Gossypium raimondii HOM05D000194 ORTHO05D000069 1.1e-14 85.1 165 40.6
Lj9C373G7 Lonicera japonica HOM05D000194 ORTHO05D000069 2.5e-14 84.0 168 43.5
Sabra09G0090000 Salix brachista HOM05D000194 ORTHO05D000069 9.5e-14 82.0 179 39.7
Gohir.D12G112532 Gossypium hirsutum HOM05D000194 ORTHO05D000069 2.8e-13 80.5 125 44.8
Prupe.8G095700 Prunus persica HOM05D000194 ORTHO05D000069 2.8e-13 80.5 120 45.8
MD05G1065100 Malus domestica HOM05D000194 ORTHO05D000069 4.7e-13 79.7 165 38.2
Sabra04G0104000 Salix brachista HOM05D000194 ORTHO05D000069 6.1e-13 79.3 178 41.0
Gohir.D04G028151 Gossypium hirsutum HOM05D000194 ORTHO05D000069 1.0e-12 78.6 164 38.4
Gorai.012G031100 Gossypium raimondii HOM05D000194 ORTHO05D000069 1.0e-12 78.6 164 38.4
MD10G1074000 Malus domestica HOM05D000194 ORTHO05D000069 1.0e-12 78.6 166 39.2
CANSAT01G3116 Cannabis sativa HOM05D000194 ORTHO05D000069 1.8e-12 77.8 170 38.2
Haze_02401 Corylus avellana HOM05D000194 ORTHO05D000069 1.8e-12 77.8 162 39.5
Gohir.D12G028700 Gossypium hirsutum HOM05D000194 ORTHO05D000069 1.8e-12 77.8 164 37.8
Potri.009G117300 Populus trichocarpa HOM05D000194 ORTHO05D000069 1.8e-12 77.8 137 44.5
Hund06239 Selenicereus undatus HOM05D000194 ORTHO05D000069 3.0e-12 77.0 177 36.2
Manes.04G088800 Manihot esculenta HOM05D000194 ORTHO05D000069 4.0e-12 76.6 143 42.0
Oeu041637.1 Olea europaea HOM05D000194 ORTHO05D000069 5.2e-12 76.3 168 38.1
EL10Ac9g21713 Beta vulgaris HOM05D000194 ORTHO05D000069 8.9e-12 75.5 184 37.0
CiPaw.05G065800 Carya illinoinensis HOM05D000194 ORTHO05D000069 3.4e-11 73.6 137 41.6
Potri.004G156000 Populus trichocarpa HOM05D000194 ORTHO05D000069 7.5e-11 72.4 177 37.3
CAN.G865.1 Capsicum annuum HOM05D000194 ORTHO05D000069 3.7e-10 70.1 168 36.3
TAR636G0616 Trochodendron aralioides HOM05D014619 ORTHO05D415235 4.9e-10 69.7 43 83.7
CAN.G1412.16 Capsicum annuum HOM05D000194 ORTHO05D000069 1.8e-09 67.8 168 36.3
Lalb_Chr01g0002501 Lupinus albus HOM05D000194 ORTHO05D000069 4.1e-09 66.6 169 37.3
Sopen01g051890 Solanum pennellii HOM05D000194 ORTHO05D000069 4.1e-09 66.6 170 38.2
PGSC0003DMG400000711 Solanum tuberosum HOM05D000194 ORTHO05D000069 7.0e-09 65.9 170 37.1
Hund00259 Selenicereus undatus HOM05D000194 ORTHO05D000069 9.2e-09 65.5 180 34.4
Solyc01g109700.3 Solanum lycopersicum HOM05D000194 ORTHO05D000069 1.2e-08 65.1 170 37.1
CSS0021699 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 3.5e-08 63.5 175 34.3
CSS0033788 Camellia sinensis var. sinensis HOM05D000194 ORTHO05D000069 3.5e-08 63.5 175 34.3
MSTRG.16816 Avicennia marina HOM05D000194 ORTHO05D000069 5.9e-08 62.8 172 39.0
CsaV3_7G000080 Cucumis sativus L. HOM05D000194 ORTHO05D000069 5.9e-08 62.8 213 31.0
DCAR_022979 Daucus carota HOM05D000194 ORTHO05D000069 5.9e-08 62.8 89 50.6
Dinv42055 Davidia involucrata HOM05D000194 ORTHO05D000069 5.9e-08 62.8 59 62.7
Duzib187G0645 Durio zibethinus HOM05D000194 ORTHO05D000069 1.0e-07 62.0 118 38.1
Glyma.04G012500 Glycine max HOM05D000194 ORTHO05D000069 1.0e-07 62.0 121 43.0
ClCG02G004870 Citrullus lanatus HOM05D000194 ORTHO05D000069 1.3e-07 61.6 228 30.3
Nitab4.5_0003526g0020 Nicotiana tabacum HOM05D000194 ORTHO05D000069 2.3e-07 60.8 167 36.5
Gorai.005G244200 Gossypium raimondii HOM05D000194 ORTHO05D000069 2.9e-07 60.5 120 40.8
GSVIVG01018942001 Vitis vinifera HOM05D000194 ORTHO05D000069 6.6e-07 59.3 158 35.4
Glyma.06G012200 Glycine max HOM05D000194 ORTHO05D000069 2.5e-06 57.4 120 39.2
GSVIVG01017452001 Vitis vinifera HOM05D010074 ORTHO05D010925 5.6e-06 56.2 70 51.4
DCAR_001572 Daucus carota HOM05D000194 ORTHO05D000069 7.3e-06 55.8 139 37.4
Gohir.A03G195000 Gossypium hirsutum HOM05D000194 ORTHO05D000069 7.3e-06 55.8 155 36.1


User provided reference genes

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