Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR376G0051 Trochodendron aralioides HOM05D005030 ORTHO05D006490 3.1e-87 325.1 161 100.0
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 1.9e-20 103.2 115 53.9
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 2.7e-19 99.4 145 46.9
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 1.4e-18 97.1 149 45.6
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 5.1e-18 95.1 161 40.4
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 1.3e-13 80.5 128 42.2
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 2.2e-13 79.7 128 43.8
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 1.1e-12 77.4 121 43.8
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 1.6e-11 73.6 125 37.6
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 3.6e-11 72.4 138 37.0
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 8.0e-11 71.2 103 43.7
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 1.8e-10 70.1 113 39.8
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 2.3e-10 69.7 136 39.0
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 2.3e-10 69.7 96 44.8
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 3.0e-10 69.3 124 40.3
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 3.0e-10 69.3 123 38.2
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 6.7e-10 68.2 121 40.5
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 8.8e-10 67.8 116 40.5
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 8.8e-10 67.8 102 41.2
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 1.5e-09 67.0 121 39.7
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 2.0e-09 66.6 116 39.7
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 2.0e-09 66.6 146 37.7
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 3.3e-09 65.9 108 38.9
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 4.4e-09 65.5 136 35.3
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 5.7e-09 65.1 166 34.3
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 5.7e-09 65.1 166 34.9
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 7.4e-09 64.7 166 34.9
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 9.7e-09 64.3 120 38.3
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 1.3e-08 63.9 121 39.7
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 1.3e-08 63.9 71 52.1
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 2.2e-08 63.2 152 36.2
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 2.2e-08 63.2 95 44.2
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 3.7e-08 62.4 97 43.3
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 4.8e-08 62.0 123 37.4
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 6.3e-08 61.6 120 38.3
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 8.2e-08 61.2 139 36.0
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 8.2e-08 61.2 116 39.7
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 8.2e-08 61.2 117 36.8
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 1.1e-07 60.8 152 36.8
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 2.4e-07 59.7 123 35.8
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 1.2e-06 57.4 140 33.6
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 1.2e-06 57.4 123 35.8
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 1.2e-06 57.4 123 35.8
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 1.6e-06 57.0 147 36.7
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 1.6e-06 57.0 99 35.4
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.6e-06 57.0 121 35.5
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 1.6e-06 57.0 132 32.6
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 2.0e-06 56.6 121 38.0
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 2.0e-06 56.6 100 37.0
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 2.6e-06 56.2 114 36.0
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 2.6e-06 56.2 123 36.6
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 2.6e-06 56.2 141 33.3
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 3.5e-06 55.8 125 34.4
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 3.5e-06 55.8 138 35.5
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 4.5e-06 55.5 121 34.7
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 5.9e-06 55.1 123 34.1
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 7.7e-06 54.7 98 38.8
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 7.7e-06 54.7 98 37.8


User provided reference genes

Program Settings