Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1144 Trochodendron aralioides HOM05D001602 ORTHO05D001470 2.3e-116 422.2 205 100.0
TAR356G0001 Trochodendron aralioides HOM05D001602 ORTHO05D001470 6.9e-84 314.3 204 78.9
TAR375G0358 Trochodendron aralioides HOM05D001602 ORTHO05D001470 1.0e-66 257.3 170 77.6
TAR375G0707 Trochodendron aralioides HOM05D001602 ORTHO05D001470 1.3e-63 246.9 177 73.4
TAR374G1398 Trochodendron aralioides HOM05D001602 ORTHO05D001470 4.5e-43 178.7 185 56.2
Nn1g00671 Nelumbo nucifera HOM05D001602 ORTHO05D001470 4.1e-36 155.6 171 53.2
Hma1.2p1_0414F.1_g147600 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 5.0e-34 148.7 170 51.2
Cfa012366 Carpinus fangiana HOM05D001602 ORTHO05D001470 8.5e-34 147.9 179 47.5
Aqoxy3G02562 Aquilegia oxysepala HOM05D001602 ORTHO05D001470 2.7e-32 142.9 172 50.0
Haze_08317 Corylus avellana HOM05D001602 ORTHO05D001470 6.1e-32 141.7 170 48.2
QL12p007555 Quercus lobata HOM05D001602 ORTHO05D001470 1.0e-31 141.0 202 44.6
Rhsim07G0121000 Rhododendron simsii HOM05D001602 ORTHO05D001470 3.0e-31 139.4 173 46.2
Lj2P248T46 Lonicera japonica HOM05D001602 ORTHO05D001470 4.0e-31 139.0 175 46.9
Potri.001G148200 Populus trichocarpa HOM05D001602 ORTHO05D001470 1.3e-29 134.0 168 47.6
MD06G1042700 Malus domestica HOM05D001602 ORTHO05D001470 2.2e-29 133.3 169 45.6
Duzib068G0907 Durio zibethinus HOM05D001602 ORTHO05D001470 8.2e-29 131.3 170 44.7
Ciclev10033731m.g Citrus clementina HOM05D001602 ORTHO05D001470 1.4e-28 130.6 173 47.4
ClCG10G001950 Citrullus lanatus HOM05D001602 ORTHO05D001470 7.0e-28 128.3 168 42.9
Thecc.03G235700 Theobroma cacao HOM05D001602 ORTHO05D001470 9.1e-28 127.9 166 45.2
Cc08_g01690 Coffea canephora HOM05D001602 ORTHO05D001470 1.3e-26 124.0 172 43.0
MELO3C013880.2 Cucumis melo HOM05D001602 ORTHO05D001470 2.2e-26 123.2 168 43.5
RcHm_v2.0_Chr7g0207961 Rosa chinensis HOM05D001602 ORTHO05D001470 3.8e-26 122.5 167 45.5
TWI81G0159 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 3.8e-26 122.5 166 45.8
Gorai.004G189800 Gossypium raimondii HOM05D001602 ORTHO05D001470 3.2e-25 119.4 165 41.2
Gohir.A08G160600 Gossypium hirsutum HOM05D001602 ORTHO05D001470 5.5e-25 118.6 165 41.8
Gohir.D08G180900 Gossypium hirsutum HOM05D001602 ORTHO05D001470 1.2e-24 117.5 165 40.6
CDE11G1140 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 1.6e-24 117.1 177 42.9
PSO384G4997 Papaver somniferum HOM05D001602 ORTHO05D001470 8.0e-24 114.8 175 40.0
PGR042G0660 Punica granatum HOM05D001602 ORTHO05D001470 1.0e-23 114.4 167 43.1
COL.COLO4_17122 Corchorus olitorius HOM05D001602 ORTHO05D001470 6.8e-23 111.7 173 40.5
CiPaw.11G086400 Carya illinoinensis HOM05D001602 ORTHO05D001470 8.0e-16 88.2 122 45.1
SEGI_27117 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 8.0e-16 88.2 160 39.4
Zm00001eb432040 Zea mays HOM05D001602 ORTHO05D001470 8.0e-16 88.2 172 35.5
TAR375G1087 Trochodendron aralioides HOM05D001602 ORTHO05D001470 5.2e-15 85.5 85 55.3
Os04g0645500 Oryza sativa ssp. japonica HOM05D001602 ORTHO05D001470 1.5e-14 84.0 175 33.7
Mapoly0059s0066 Marchantia polymorpha HOM05D001602 ORTHO05D001470 8.3e-13 78.2 171 34.5
SMO118G0160 Selaginella moellendorffii HOM05D001602 ORTHO05D001470 1.8e-12 77.0 164 36.6
Ah.12g053740 Amaranthus hybridus HOM05D001602 ORTHO05D001470 2.7e-11 73.2 180 33.3
CDE05G3564 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 3.5e-11 72.8 168 36.3
GSVIVG01013248001 Vitis vinifera HOM05D001602 ORTHO05D001470 3.6e-08 62.8 96 41.7


User provided reference genes

Program Settings