Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1113 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.3e-78 296.2 142 100.0
TAR629G0329 Trochodendron aralioides HOM05D008129 ORTHO05D010232 1.3e-44 183.3 129 69.8
Haze_08930 Corylus avellana HOM05D008129 ORTHO05D010232 3.1e-35 152.1 129 57.4
Dinv38993 Davidia involucrata HOM05D008129 ORTHO05D010232 5.3e-35 151.4 124 56.5
Cfa012120 Carpinus fangiana HOM05D008129 ORTHO05D010232 2.0e-34 149.4 129 56.6
Hma1.2p1_0514F.1_g169980 Hydrangea macrophylla HOM05D008129 ORTHO05D010232 2.6e-34 149.1 129 55.8
MD04G1064800 Malus domestica HOM05D008129 ORTHO05D010232 2.9e-33 145.6 142 54.2
Thecc.03G273100 Theobroma cacao HOM05D008129 ORTHO05D010232 2.9e-33 145.6 130 55.4
CiPaw.11G139400 Carya illinoinensis HOM05D008129 ORTHO05D010232 5.0e-33 144.8 129 51.9
MD00G1110200 Malus domestica HOM05D008129 ORTHO05D010232 1.9e-32 142.9 126 55.6
Nn6g34205 Nelumbo nucifera HOM05D008129 ORTHO05D010232 1.9e-32 142.9 130 55.4
RcHm_v2.0_Chr7g0198961 Rosa chinensis HOM05D008129 ORTHO05D010232 9.4e-32 140.6 120 56.7
CSS0045994 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 3.6e-31 138.7 121 55.4
QL12p017600 Quercus lobata HOM05D008129 ORTHO05D010232 3.0e-30 135.6 135 50.4
Gohir.D03G153100 Gossypium hirsutum HOM05D008129 ORTHO05D010232 1.5e-29 133.3 130 51.5
Gohir.A03G018500 Gossypium hirsutum HOM05D008129 ORTHO05D010232 3.3e-29 132.1 130 51.5
Sabra01G0081800 Salix brachista HOM05D008129 ORTHO05D010232 3.3e-29 132.1 119 52.1
FvH4_5g01760 Fragaria vesca HOM05D008129 ORTHO05D010232 7.5e-29 131.0 112 54.5
FAN18G4443 Fragaria x ananassa HOM05D008129 ORTHO05D010232 7.5e-29 131.0 112 54.5
QL12p017610 Quercus lobata HOM05D008129 ORTHO05D010232 7.5e-29 131.0 136 48.5
Gorai.003G160700 Gossypium raimondii HOM05D008129 ORTHO05D010232 1.7e-28 129.8 130 51.5
COL.COLO4_05253 Corchorus olitorius HOM05D008129 ORTHO05D010232 4.8e-28 128.3 120 53.3
FAN13G1875 Fragaria x ananassa HOM05D008129 ORTHO05D010232 4.8e-28 128.3 112 54.5
FAN04G1130 Fragaria x ananassa HOM05D008129 ORTHO05D010232 6.3e-28 127.9 112 53.6
Prupe.5G093100 Prunus persica HOM05D008129 ORTHO05D010232 6.3e-28 127.9 121 53.7
FAN08G0538 Fragaria x ananassa HOM05D008129 ORTHO05D010232 1.8e-27 126.3 112 52.7
CiPaw.12G097000 Carya illinoinensis HOM05D008129 ORTHO05D010232 2.4e-27 125.9 130 49.2
Potri.001G108300 Populus trichocarpa HOM05D008129 ORTHO05D010232 4.1e-27 125.2 111 50.5
CSS0008314 Camellia sinensis var. sinensis HOM05D008129 ORTHO05D010232 1.6e-26 123.2 135 48.1
Ciclev10022388m.g Citrus clementina HOM05D008129 ORTHO05D010232 1.7e-25 119.8 121 49.6
AUR62010633 Chenopodium quinoa HOM05D008129 ORTHO05D010232 6.5e-25 117.9 125 47.2
Manes.01G065300 Manihot esculenta HOM05D008129 ORTHO05D010232 6.5e-25 117.9 120 47.5
Rhsim07G0093300 Rhododendron simsii HOM05D008129 ORTHO05D010232 6.5e-25 117.9 124 50.8
EL10Ac5g12748 Beta vulgaris HOM05D008129 ORTHO05D010232 1.9e-24 116.3 130 47.7
SGA_v2.0_scaffold144G35967 Striga asiatica HOM05D008129 ORTHO05D010232 5.5e-24 114.8 130 43.8
ECA246G2221 Erigeron canadensis HOM05D008129 ORTHO05D010232 1.6e-23 113.2 126 47.6
Lj2P194T38 Lonicera japonica HOM05D008129 ORTHO05D010232 4.7e-23 111.7 126 46.0
Migut.E01284 Erythranthe guttata HOM05D008129 ORTHO05D010232 2.6e-21 105.9 127 40.2
Cc08_g14170 Coffea canephora HOM05D008129 ORTHO05D010232 4.4e-21 105.1 133 45.1
PGSC0003DMG400003052 Solanum tuberosum HOM05D008129 ORTHO05D010232 4.8e-20 101.7 119 43.7
Nitab4.5_0003924g0090 Nicotiana tabacum HOM05D008129 ORTHO05D010232 1.1e-19 100.5 119 44.5
Solyc08g080530.1 Solanum lycopersicum HOM05D008129 ORTHO05D010232 1.4e-19 100.1 119 42.9
Oeu029783.1 Olea europaea HOM05D008129 ORTHO05D010232 5.4e-19 98.2 122 41.0
SGA_v2.0_scaffold385G50459 Striga asiatica HOM05D008129 ORTHO05D010232 3.5e-18 95.5 102 43.1
MELO3C005638.2 Cucumis melo HOM05D008129 ORTHO05D010232 1.8e-14 83.2 114 43.0
Eucgr.E00553 Eucalyptus grandis HOM05D008129 ORTHO05D010232 1.8e-14 83.2 122 34.4
CsaV3_5G003170 Cucumis sativus L. HOM05D008129 ORTHO05D010232 4.0e-14 82.0 119 42.0
Eucgr.D01909 Eucalyptus grandis HOM05D008129 ORTHO05D010232 4.0e-14 82.0 123 38.2
Lalb_Chr09g0333221 Lupinus albus HOM05D008129 ORTHO05D010232 5.7e-13 78.2 119 36.1
Medtr8g096860 Medicago truncatula HOM05D008129 ORTHO05D010232 1.7e-12 76.6 111 38.7
Psat7g036080 Pisum sativum HOM05D008129 ORTHO05D010232 4.9e-12 75.1 121 38.8
Lsat_1_v5_gn_3_8420 Lactuca sativa HOM05D008129 ORTHO05D010232 4.1e-11 72.0 72 52.8
TPR.G12796 Trifolium pratense HOM05D000268 ORTHO05D000261 2.7e-10 69.3 121 37.2
Glyma.11G025800 Glycine max HOM05D008129 ORTHO05D010232 3.5e-10 68.9 112 39.3
ClCG01G003050 Citrullus lanatus HOM05D008129 ORTHO05D010232 1.0e-09 67.4 115 40.0
Nitab4.5_0005213g0010 Nicotiana tabacum HOM05D008129 ORTHO05D010232 2.9e-09 65.9 80 46.2
VMungo1215G1765 Vigna mungo HOM05D008129 ORTHO05D010232 2.9e-09 65.9 113 38.9
SEGI_31534 Sequoiadendron giganteum HOM05D001109 ORTHO05D002124 6.6e-09 64.7 116 34.5
Phvul.002G155100 Phaseolus vulgaris HOM05D008129 ORTHO05D010232 1.5e-08 63.5 112 33.9
COL.COLO4_05254 Corchorus olitorius HOM05D008129 ORTHO05D010232 7.3e-08 61.2 126 33.3
TPR.G26844 Trifolium pratense HOM05D000865 ORTHO05D000739 1.0e-06 57.4 121 29.8
Hma1.2p1_0402F.1_g145130 Hydrangea macrophylla HOM05D000865 ORTHO05D000739 1.8e-06 56.6 115 31.3
BraA08t35393Z Brassica rapa HOM05D000865 ORTHO05D000739 3.0e-06 55.8 113 29.2
Gorai.003G160800 Gossypium raimondii HOM05D008129 ORTHO05D010232 3.0e-06 55.8 113 34.5
Gohir.D03G153200 Gossypium hirsutum HOM05D008129 ORTHO05D010232 5.2e-06 55.1 113 34.5
Gohir.A03G018400 Gossypium hirsutum HOM05D008129 ORTHO05D010232 6.8e-06 54.7 72 44.4
VMungo1383G1522 Vigna mungo HOM05D002113 ORTHO05D002124 6.8e-06 54.7 120 33.3
Zm00001eb269500 Zea mays HOM05D041313 ORTHO05D010232 8.9e-06 54.3 120 28.3


User provided reference genes

Program Settings