Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1104 Trochodendron aralioides HOM05D001176 ORTHO05D007019 0.0e+00 1360.1 698 100.0
MBI04_g37458_MAGBIO Magnolia biondii HOM05D001176 ORTHO05D007019 0.0e+00 1144.8 696 82.8
COL.COLO4_11286 Corchorus olitorius HOM05D001176 ORTHO05D007019 0.0e+00 1132.1 698 82.2
CiPaw.11G075700 Carya illinoinensis HOM05D001176 ORTHO05D007019 0.0e+00 1129.8 697 82.8
CSS0027781 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 0.0e+00 1128.6 694 83.3
GSVIVG01013198001 Vitis vinifera HOM05D001176 ORTHO05D007019 0.0e+00 1127.9 698 82.1
Duzib205G1840 Durio zibethinus HOM05D001176 ORTHO05D007019 0.0e+00 1127.5 698 81.4
Lj9C202G6 Lonicera japonica HOM05D001176 ORTHO05D007019 0.0e+00 1121.3 696 81.6
Thecc.03G318700 Theobroma cacao HOM05D001176 ORTHO05D007019 0.0e+00 1121.3 698 81.8
Atru.chr8.2633 Acer truncatum HOM05D001176 ORTHO05D007019 0.0e+00 1115.5 699 80.7
Aqoxy7G00899 Aquilegia oxysepala HOM05D001176 ORTHO05D007019 0.0e+00 1111.3 696 83.5
Haze_02517 Corylus avellana HOM05D001176 ORTHO05D007019 0.0e+00 1110.9 732 79.0
PSO732G0580 Papaver somniferum HOM05D001176 ORTHO05D007019 0.0e+00 1108.2 698 81.2
Rhsim11G0036600 Rhododendron simsii HOM05D001176 ORTHO05D007019 0.0e+00 1107.4 742 77.5
Gorai.004G178200 Gossypium raimondii HOM05D001176 ORTHO05D007019 0.0e+00 1106.3 701 79.7
Gohir.D08G170800 Gossypium hirsutum HOM05D001176 ORTHO05D007019 0.0e+00 1104.7 701 79.7
Nn1g09379 Nelumbo nucifera HOM05D001176 ORTHO05D007019 0.0e+00 1103.6 696 81.9
Lj2g0027044 Lotus japonicus HOM05D001176 ORTHO05D007019 0.0e+00 1100.9 694 81.3
Medtr5g025410 Medicago truncatula HOM05D001176 ORTHO05D007019 0.0e+00 1098.2 694 80.7
Gohir.A08G149700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 0.0e+00 1097.0 698 79.4
PSO675G7478 Papaver somniferum HOM05D001176 ORTHO05D007019 0.0e+00 1096.6 698 80.8
Potri.004G236600 Populus trichocarpa HOM05D001176 ORTHO05D007019 0.0e+00 1096.3 695 80.7
Psat2g146720 Pisum sativum HOM05D001176 ORTHO05D007019 0.0e+00 1093.2 694 80.8
Manes.15G189800 Manihot esculenta HOM05D001176 ORTHO05D007019 0.0e+00 1092.4 696 81.0
Lalb_Chr09g0324961 Lupinus albus HOM05D001176 ORTHO05D007019 0.0e+00 1091.6 694 80.8
MSTRG.25741 Avicennia marina HOM05D001176 ORTHO05D007019 0.0e+00 1090.9 697 79.9
Cc08_g05630 Coffea canephora HOM05D001176 ORTHO05D007019 0.0e+00 1090.1 700 80.0
Glyma.11G090100 Glycine max HOM05D001176 ORTHO05D007019 0.0e+00 1090.1 694 80.5
Eucgr.D02557 Eucalyptus grandis HOM05D001176 ORTHO05D007019 0.0e+00 1089.3 693 79.8
SalBow4G1488 Salvia bowleyana HOM05D001176 ORTHO05D007019 0.0e+00 1088.6 696 79.2
AUR62017508 Chenopodium quinoa HOM05D001176 ORTHO05D007019 0.0e+00 1088.2 693 79.1
HanXRQChr03g0068151 Helianthus annuus HOM05D001176 ORTHO05D007019 0.0e+00 1087.8 696 79.3
DCAR_001483 Daucus carota HOM05D001176 ORTHO05D007019 0.0e+00 1087.0 693 79.7
PGR031G2625 Punica granatum HOM05D001176 ORTHO05D007019 0.0e+00 1085.5 699 78.8
Oeu039635.2 Olea europaea HOM05D001176 ORTHO05D007019 0.0e+00 1082.0 740 75.5
Nitab4.5_0000030g0410 Nicotiana tabacum HOM05D001176 ORTHO05D007019 0.0e+00 1081.2 696 79.6
Prupe.1G077200 Prunus persica HOM05D001176 ORTHO05D007019 0.0e+00 1080.9 698 79.4
ECA240G2428 Erigeron canadensis HOM05D001176 ORTHO05D007019 0.0e+00 1080.5 697 78.6
Lalb_Chr16g0380331 Lupinus albus HOM05D001176 ORTHO05D007019 0.0e+00 1080.5 695 79.4
Phvul.002G121100 Phaseolus vulgaris HOM05D001176 ORTHO05D007019 0.0e+00 1080.5 694 80.4
Migut.A00530 Erythranthe guttata HOM05D001176 ORTHO05D007019 0.0e+00 1080.1 696 79.3
RcHm_v2.0_Chr6g0304421 Rosa chinensis HOM05D001176 ORTHO05D007019 0.0e+00 1080.1 693 80.1
Ca_25034_v3 Cicer arietinum L. HOM05D001176 ORTHO05D007019 3.3e-311 1071.2 677 80.8
CAN.G930.8 Capsicum annuum HOM05D001176 ORTHO05D007019 4.7e-310 1067.4 696 78.6
Ciclev10011152m.g Citrus clementina HOM05D001176 ORTHO05D007019 1.1e-309 1066.2 698 79.4
Sed0008250 Sechium edule HOM05D001176 ORTHO05D007019 1.4e-309 1065.8 694 78.7
EL10Ac5g11241 Beta vulgaris HOM05D001176 ORTHO05D007019 2.3e-309 1065.1 698 76.8
FAN27G0701 Fragaria x ananassa HOM05D001176 ORTHO05D007019 3.1e-309 1064.7 693 79.2
VMungo1215G1610 Vigna mungo HOM05D001176 ORTHO05D007019 5.2e-309 1063.9 694 79.0
Sopen08g024070 Solanum pennellii HOM05D001176 ORTHO05D007019 3.4e-308 1061.2 696 78.3
Solyc08g075440.4 Solanum lycopersicum HOM05D001176 ORTHO05D007019 4.4e-308 1060.8 696 78.3
CsaV3_4G027950 Cucumis sativus L. HOM05D001176 ORTHO05D007019 1.3e-307 1059.3 694 78.4
FAN20G0920 Fragaria x ananassa HOM05D001176 ORTHO05D007019 3.7e-307 1057.7 693 78.6
SGA_v2.0_scaffold96G29093 Striga asiatica HOM05D001176 ORTHO05D007019 8.3e-307 1056.6 802 69.5
Sc21g0000770 Simmondsia chinensis HOM05D001176 ORTHO05D007019 1.4e-306 1055.8 699 77.4
ATR0665G266 Amborella trichopoda HOM05D001176 ORTHO05D007019 1.9e-306 1055.4 699 77.7
Sabra01G0180800 Salix brachista HOM05D001176 ORTHO05D007019 3.2e-306 1054.7 695 78.3
TWI79G0428 Tripterygium wilfordii HOM05D001176 ORTHO05D007019 5.4e-306 1053.9 699 78.4
MELO3C010519.2 Cucumis melo HOM05D001176 ORTHO05D007019 4.6e-305 1050.8 695 78.3
Ah.05g167880 Amaranthus hybridus HOM05D001176 ORTHO05D007019 1.5e-303 1045.8 726 73.0
Peaxi162Scf00193g00811 Petunia axillaris HOM05D001176 ORTHO05D007019 9.5e-303 1043.1 696 77.4
ClCG11G016030 Citrullus lanatus HOM05D001176 ORTHO05D007019 2.8e-302 1041.6 694 77.7
Gohir.D08G170700 Gossypium hirsutum HOM05D001176 ORTHO05D007019 4.7e-302 1040.8 701 75.9
Lsat_1_v5_gn_9_124460 Lactuca sativa HOM05D001176 ORTHO05D007019 3.4e-300 1034.6 712 75.7
TPR.G8989 Trifolium pratense HOM05D001176 ORTHO05D007019 3.2e-298 1028.1 651 80.2
CDE04G2738 Ceratophyllum demersum HOM05D001176 ORTHO05D007019 5.4e-298 1027.3 695 76.0
Nitab4.5_0001333g0050 Nicotiana tabacum HOM05D001176 ORTHO05D007019 1.3e-296 1022.7 696 76.1
Carub.0001s3008 Capsella rubella HOM05D001176 ORTHO05D007019 3.6e-294 1014.6 697 75.2
AL1G45850 Arabidopsis lyrata HOM05D001176 ORTHO05D007019 6.2e-294 1013.8 698 74.5
Cpa.g.sc90.31 Carica papaya HOM05D001176 ORTHO05D007019 8.1e-294 1013.4 698 75.1
THA.LOC104798522 Tarenaya hassleriana HOM05D001176 ORTHO05D007019 4.0e-293 1011.1 697 74.5
BcaB07g32825 Brassica carinata HOM05D001176 ORTHO05D007019 5.2e-293 1010.7 698 74.8
AT1G31780 Arabidopsis thaliana HOM05D001176 ORTHO05D007019 3.4e-292 1008.1 697 74.7
Sp1g27470 Schrenkiella parvula HOM05D001176 ORTHO05D007019 9.9e-292 1006.5 700 74.6
A09p34570 Brassica napus HOM05D001176 ORTHO05D007019 4.2e-290 1001.1 698 74.2
BraA09t38996Z Brassica rapa HOM05D001176 ORTHO05D007019 5.4e-290 1000.7 698 74.2
BcaC05g27192 Brassica carinata HOM05D001176 ORTHO05D007019 1.6e-289 999.2 698 74.1
BolC5t31821H Brassica oleracea HOM05D001176 ORTHO05D007019 1.6e-289 999.2 698 74.1
Thhalv10006980m.g Eutrema salsugineum HOM05D001176 ORTHO05D007019 2.1e-289 998.8 699 74.1
CARHR031080 Cardamine hirsuta HOM05D001176 ORTHO05D007019 5.1e-288 994.2 697 73.7
unitig_748.g7392 Utricularia gibba HOM05D001176 ORTHO05D007019 1.1e-287 993.0 697 73.2
Aa31LG2G14290 Aethionema arabicum HOM05D001176 ORTHO05D007019 9.6e-287 989.9 695 73.5
C05p30980 Brassica napus HOM05D001176 ORTHO05D007019 6.2e-286 987.3 698 73.4
SEGI_32977 Sequoiadendron giganteum HOM05D001176 ORTHO05D007019 5.1e-280 967.6 703 71.1
QL12p003889 Quercus lobata HOM05D001176 ORTHO05D007019 7.9e-273 943.7 1202 48.3
Zm00001eb009310 Zea mays HOM05D001176 ORTHO05D007019 2.5e-266 922.2 693 69.1
Actinidia01255 Actinidia chinensis HOM05D001176 ORTHO05D007019 2.7e-265 918.7 551 84.6
AUR62015049 Chenopodium quinoa HOM05D001176 ORTHO05D007019 2.7e-265 918.7 693 69.3
Oeu014108.2 Olea europaea HOM05D001176 ORTHO05D007019 5.5e-258 894.4 770 63.5
HPP92_018761 Vanilla planifolia HOM05D001176 ORTHO05D007019 5.5e-250 867.8 572 77.8
Mapoly0009s0222 Marchantia polymorpha HOM05D001176 ORTHO05D007019 2.1e-249 865.9 724 63.7
Pp3c2_23210 Physcomitrium patens HOM05D001176 ORTHO05D007019 8.5e-243 844.0 723 60.9
FvH4_2g37280 Fragaria vesca HOM05D001176 ORTHO05D007019 1.0e-235 820.5 536 79.9
PGSC0003DMG400001956 Solanum tuberosum HOM05D001176 ORTHO05D007019 7.5e-223 777.7 514 77.0
FAN15G1703 Fragaria x ananassa HOM05D001176 ORTHO05D007019 9.7e-223 777.3 469 83.4
MD13G1243800 Malus domestica HOM05D001176 ORTHO05D007019 1.8e-216 756.5 522 74.1
AagrBONN_evm.TU.Sc2ySwM_362.2951 Anthoceros agrestis HOM05D001176 ORTHO05D007019 1.2e-212 743.8 642 59.7
SMO339G0033 Selaginella moellendorffii HOM05D001176 ORTHO05D007019 2.7e-212 742.7 698 58.9
MD13G1244000 Malus domestica HOM05D001176 ORTHO05D007019 1.1e-194 684.1 418 82.1
Cre13.g587750 Chlamydomonas reinhardtii HOM05D001176 ORTHO05D007019 1.4e-144 517.7 718 42.6
PRCOL_00001869 Prasinoderma coloniale HOM05D001176 ORTHO05D007019 2.6e-135 486.9 713 41.5
Actinidia32787 Actinidia chinensis HOM05D001176 ORTHO05D007019 8.5e-134 481.9 693 45.3
CSS0004945 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.1e-133 481.5 694 46.1
MCO03G158 Micromonas commoda HOM05D001176 ORTHO05D007019 3.0e-131 473.4 709 40.2
Dinv41808 Davidia involucrata HOM05D001176 ORTHO05D007019 1.4e-128 464.5 268 87.7
Dinv41809 Davidia involucrata HOM05D001176 ORTHO05D007019 7.4e-122 442.2 277 83.8
CSS0012136 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 1.5e-117 427.9 661 43.9
CBR_g61503 Chara braunii HOM05D001176 ORTHO05D007019 4.7e-116 422.9 476 50.4
CSS0030107 Camellia sinensis var. sinensis HOM05D001176 ORTHO05D007019 5.0e-110 402.9 232 86.6
Cc07_g20650 Coffea canephora HOM05D001176 ORTHO05D007019 1.1e-101 375.2 431 52.2
CDE07G2068 Ceratophyllum demersum HOM05D004834 ORTHO05D006247 8.8e-99 365.5 683 38.2
MD13G1243900 Malus domestica HOM05D001176 ORTHO05D007019 2.2e-89 334.3 251 70.1
FAN15G2248 Fragaria x ananassa HOM05D001176 ORTHO05D007019 3.0e-78 297.4 226 69.5
vmacro00085 Vaccinium macrocarpon HOM05D001176 ORTHO05D007019 3.0e-78 297.4 296 58.1
Hund16023 Selenicereus undatus HOM05D001176 ORTHO05D007019 2.0e-66 258.1 203 68.5
CBR_g61501 Chara braunii HOM05D001176 ORTHO05D007019 3.7e-65 253.8 167 73.7
arahy.Tifrunner.gnm1.ann1.7XHH75 Arachis hypogaea HOM05D001176 ORTHO05D007019 2.4e-48 198.0 137 78.8
arahy.Tifrunner.gnm1.ann1.V0K3WG Arachis hypogaea HOM05D001176 ORTHO05D007019 2.4e-48 198.0 137 78.8
Glyma.01G154501 Glycine max HOM05D001176 ORTHO05D007019 1.4e-40 172.2 101 81.2
Glyma.01G154450 Glycine max HOM05D001176 ORTHO05D007019 2.3e-38 164.9 118 76.3
Os03g0225600 Oryza sativa ssp. japonica HOM05D001176 ORTHO05D007019 7.1e-32 143.3 117 61.5
HPP92_018762 Vanilla planifolia HOM05D001176 ORTHO05D007019 3.7e-28 131.0 86 72.1
CsaV3_4G027980 Cucumis sativus L. HOM05D001176 ORTHO05D007019 5.3e-19 100.5 79 63.3
Glyma.01G154551 Glycine max HOM05D001176 ORTHO05D214389 1.2e-18 99.4 76 73.7
TPR.G11479 Trifolium pratense HOM05D001176 ORTHO05D007019 1.4e-16 92.4 64 75.0
Zm00001eb399610 Zea mays HOM05D001176 ORTHO05D007019 2.1e-15 88.6 150 38.7


User provided reference genes

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