Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 1.8e-87 325.9 161 100.0
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 3.8e-45 185.3 160 60.6
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 9.3e-44 180.6 135 61.5
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 1.2e-43 180.3 162 54.9
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 1.3e-42 176.8 117 68.4
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 3.0e-42 175.6 160 58.1
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 3.3e-41 172.2 159 59.7
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 5.6e-41 171.4 137 64.2
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 8.2e-40 167.5 126 60.3
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.8e-39 166.4 160 53.1
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 3.1e-39 165.6 140 57.9
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 3.1e-39 165.6 108 65.7
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 5.3e-39 164.9 124 60.5
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 9.0e-39 164.1 155 62.6
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 2.0e-38 162.9 127 59.1
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 7.6e-38 161.0 138 58.0
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.0e-37 160.6 138 58.0
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.3e-37 160.2 131 60.3
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.7e-37 159.8 132 59.1
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 2.2e-37 159.5 130 55.4
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 2.9e-37 159.1 130 57.7
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.9e-37 159.1 145 62.8
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.9e-36 156.4 127 63.8
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 2.5e-36 156.0 93 72.0
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.2e-35 153.7 104 66.3
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 1.3e-34 150.2 164 50.6
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.3e-34 150.2 157 51.6
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 3.0e-34 149.1 165 52.1
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 5.1e-34 148.3 157 53.5
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 1.9e-33 146.4 115 59.1
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 3.3e-33 145.6 138 50.7
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 3.3e-33 145.6 144 52.1
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 7.4e-33 144.4 121 54.5
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 9.7e-33 144.1 121 54.5
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 1.3e-32 143.7 127 53.5
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 2.2e-32 142.9 123 56.1
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 2.2e-32 142.9 158 48.7
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 4.8e-32 141.7 171 45.0
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 6.3e-32 141.4 124 54.8
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.8e-31 139.8 140 49.3
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 4.1e-31 138.7 127 52.8
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 4.1e-31 138.7 139 50.4
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 9.0e-31 137.5 144 50.7
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 9.0e-31 137.5 119 52.9
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 1.2e-30 137.1 137 49.6
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 1.5e-30 136.7 135 48.9
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 1.5e-30 136.7 124 51.6
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 2.0e-30 136.3 131 51.9
FAN03G2224 Fragaria x ananassa HOM05D007737 ORTHO05D009754 5.9e-30 134.8 135 48.9
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 8.5e-29 131.0 126 60.3
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 1.9e-28 129.8 135 48.1
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 1.9e-28 129.8 138 47.1
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 1.9e-28 129.8 105 65.7
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 2.5e-28 129.4 112 64.3
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 2.5e-28 129.4 129 48.1
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 7.2e-28 127.9 108 53.7
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 7.2e-28 127.9 121 49.6
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 7.9e-27 124.4 94 69.1
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 6.7e-26 121.3 98 60.2
FAN10G0020 Fragaria x ananassa HOM05D007737 ORTHO05D009754 2.2e-24 116.3 120 47.5
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 1.4e-23 113.6 127 44.9
HPP92_007265 Vanilla planifolia HOM05D007737 ORTHO05D009754 4.1e-23 112.1 103 57.3
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 2.6e-22 109.4 96 53.1
AUR62023349 Chenopodium quinoa HOM05D007737 ORTHO05D009754 2.6e-22 109.4 120 44.2
Os04g0589200 Oryza sativa ssp. japonica HOM05D007737 ORTHO05D009754 7.7e-22 107.8 108 42.6
AUR62013808 Chenopodium quinoa HOM05D007737 ORTHO05D009754 8.5e-21 104.4 120 41.7
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 2.5e-20 102.8 123 48.8
Sopen06g017020 Solanum pennellii HOM05D007737 ORTHO05D009754 9.4e-20 100.9 77 57.1
THA.LOC104806480 Tarenaya hassleriana HOM05D007737 ORTHO05D009754 1.2e-19 100.5 95 52.6
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 1.6e-19 100.1 113 50.4
Mapoly0099s0043 Marchantia polymorpha HOM05D007737 ORTHO05D009754 3.6e-19 99.0 86 52.3
CARHR093000 Cardamine hirsuta HOM05D007737 ORTHO05D009754 1.0e-18 97.4 131 46.6
BcaC09g48726 Brassica carinata HOM05D001802 ORTHO05D001788 3.9e-18 95.5 123 46.3
Sp3g15800 Schrenkiella parvula HOM05D007737 ORTHO05D009754 5.1e-18 95.1 99 52.5
Prupe.2G111200 Prunus persica HOM05D007737 ORTHO05D009754 8.8e-18 94.4 101 51.5
C01p46550 Brassica napus HOM05D007737 ORTHO05D009754 1.1e-17 94.0 96 54.2
Thhalv10021734m.g Eutrema salsugineum HOM05D007737 ORTHO05D009754 1.1e-17 94.0 99 52.5
Medtr5g088570 Medicago truncatula HOM05D004879 ORTHO05D008271 1.1e-17 94.0 83 55.4
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 1.5e-17 93.6 98 50.0
ClCG06G000750 Citrullus lanatus HOM05D007737 ORTHO05D009754 4.4e-17 92.0 69 59.4
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 7.4e-17 91.3 130 43.8
MELO3C022466.2 Cucumis melo HOM05D007737 ORTHO05D009754 1.7e-16 90.1 144 39.6
FAN06G2876 Fragaria x ananassa HOM05D007737 ORTHO05D009754 4.8e-16 88.6 74 56.8
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 6.3e-16 88.2 92 63.0
BcaB04g20827 Brassica carinata HOM05D001802 ORTHO05D001788 1.4e-15 87.0 129 44.2
Nitab4.5_0000507g0110 Nicotiana tabacum HOM05D007737 ORTHO05D009754 1.8e-15 86.7 106 44.3
vmacro13551 Vaccinium macrocarpon HOM05D007737 ORTHO05D009754 5.3e-15 85.1 175 32.0
Pp3c17_5190 Physcomitrium patens HOM05D007737 ORTHO05D009754 5.9e-14 81.6 84 44.0
unitig_22.g5837 Utricularia gibba HOM05D007737 ORTHO05D009754 5.9e-14 81.6 89 43.8
Pp3c8_23020 Physcomitrium patens HOM05D007737 ORTHO05D009754 1.7e-13 80.1 84 45.2
EL10Ac1g00699 Beta vulgaris HOM05D007737 ORTHO05D009754 5.2e-10 68.6 64 51.6
Peaxi162Scf01343g00168 Petunia axillaris HOM05D007737 ORTHO05D009754 2.6e-09 66.2 98 41.8
HPP92_007269 Vanilla planifolia HOM05D007737 ORTHO05D009754 5.7e-09 65.1 40 65.0
Nn1g00594 Nelumbo nucifera HOM05D007737 ORTHO05D009754 5.3e-07 58.5 44 61.4
Cre02.g091193 Chlamydomonas reinhardtii HOM05D007737 ORTHO05D009754 1.2e-06 57.4 64 40.6
A01p36650 Brassica napus HOM05D007737 ORTHO05D009754 2.6e-06 56.2 48 70.8


User provided reference genes

Program Settings