Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1080 Trochodendron aralioides HOM05D000191 ORTHO05D031279 3.8e-114 414.8 208 100.0
TAR374G1724 Trochodendron aralioides HOM05D000191 ORTHO05D000122 8.0e-80 300.8 198 78.3
TAR374G1043 Trochodendron aralioides HOM05D000191 ORTHO05D000122 2.7e-72 275.8 185 77.8
TAR629G2371 Trochodendron aralioides HOM05D000191 ORTHO05D000122 1.5e-57 226.9 204 66.2
GSVIVG01006274001 Vitis vinifera HOM05D000191 ORTHO05D000122 3.9e-50 202.2 206 55.8
Haze_07946 Corylus avellana HOM05D000191 ORTHO05D000122 4.4e-46 188.7 201 53.2
Cfa012687 Carpinus fangiana HOM05D000191 ORTHO05D000122 8.3e-45 184.5 201 53.7
Nn6g33890 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.3e-42 177.2 192 53.6
CiPaw.12G050800 Carya illinoinensis HOM05D000191 ORTHO05D000122 1.4e-39 167.2 194 50.5
Dinv21653 Davidia involucrata HOM05D000191 ORTHO05D000122 2.9e-37 159.5 204 49.0
MBI01_g19337_MAGBIO Magnolia biondii HOM05D000191 ORTHO05D000122 4.1e-36 155.6 215 43.3
TWI81G0079 Tripterygium wilfordii HOM05D000191 ORTHO05D000122 2.1e-35 153.3 206 49.0
Aqoxy5G03822 Aquilegia oxysepala HOM05D000191 ORTHO05D000122 1.7e-34 150.2 197 49.2
Cpa.g.sc89.77 Carica papaya HOM05D000191 ORTHO05D028468 2.3e-34 149.8 212 46.7
Manes.01G082900 Manihot esculenta HOM05D000191 ORTHO05D000122 1.5e-33 147.1 207 43.5
Eucgr.D02098 Eucalyptus grandis HOM05D000191 ORTHO05D000122 5.6e-33 145.2 212 42.9
Rhsim09G0172600 Rhododendron simsii HOM05D000191 ORTHO05D000122 2.1e-32 143.3 209 46.9
CANSAT56G1135 Cannabis sativa HOM05D000191 ORTHO05D000122 3.6e-32 142.5 195 43.6
Sabra03G0049100 Salix brachista HOM05D000191 ORTHO05D000122 8.1e-32 141.4 204 39.7
FAN04G2024 Fragaria x ananassa HOM05D000191 ORTHO05D000122 5.2e-31 138.7 208 43.3
PSO063G6032 Papaver somniferum HOM05D000191 ORTHO05D000122 8.9e-31 137.9 195 44.1
FAN18G4581 Fragaria x ananassa HOM05D000191 ORTHO05D000122 1.2e-30 137.5 208 42.8
FAN13G3259 Fragaria x ananassa HOM05D000191 ORTHO05D000122 2.6e-30 136.3 208 42.3
MD04G1060100 Malus domestica HOM05D000191 ORTHO05D000122 3.4e-30 136.0 207 41.5
Potri.003G079000 Populus trichocarpa HOM05D000191 ORTHO05D000122 3.4e-30 136.0 195 39.5
FvH4_5g19390 Fragaria vesca HOM05D000191 ORTHO05D000122 2.2e-29 133.3 208 42.3
PGSC0003DMG400012501 Solanum tuberosum HOM05D000191 ORTHO05D000122 3.8e-29 132.5 182 43.4
Prupe.5G065600 Prunus persica HOM05D000191 ORTHO05D000122 6.4e-29 131.7 205 43.9
RcHm_v2.0_Chr7g0203891 Rosa chinensis HOM05D000191 ORTHO05D000122 8.4e-29 131.3 209 42.6
QL12p011481 Quercus lobata HOM05D000191 ORTHO05D000122 1.4e-28 130.6 171 47.4
CAN.G1227.22 Capsicum annuum HOM05D000191 ORTHO05D000122 5.4e-28 128.6 198 41.9
Thecc.03G248400 Theobroma cacao HOM05D000191 ORTHO05D000122 6.0e-27 125.2 207 42.0
PGR031G0404 Punica granatum HOM05D000191 ORTHO05D000122 7.8e-27 124.8 198 36.4
Solyc08g007310.3 Solanum lycopersicum HOM05D000191 ORTHO05D000122 1.7e-26 123.6 204 40.2
Nitab4.5_0000712g0100 Nicotiana tabacum HOM05D000191 ORTHO05D000122 3.0e-26 122.9 205 41.5
Nitab4.5_0000190g0200 Nicotiana tabacum HOM05D000191 ORTHO05D000122 1.1e-25 120.9 184 44.0
Sc07g0009220 Simmondsia chinensis HOM05D000191 ORTHO05D000122 1.5e-25 120.6 185 43.2
Ciclev10019663m.g Citrus clementina HOM05D000191 ORTHO05D000122 3.3e-25 119.4 194 40.7
vmacro00003 Vaccinium macrocarpon HOM05D000191 ORTHO05D000122 9.6e-25 117.9 206 43.2
Nn1g00942 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.6e-24 117.1 90 62.2
Ah.12g054300 Amaranthus hybridus HOM05D000191 ORTHO05D000122 2.1e-24 116.7 183 39.9
Peaxi162Scf00209g00119 Petunia axillaris HOM05D000191 ORTHO05D000122 2.1e-24 116.7 204 41.2
EL10Ac5g12359 Beta vulgaris HOM05D000191 ORTHO05D000122 2.8e-24 116.3 185 41.1
Sed0020230 Sechium edule HOM05D000191 ORTHO05D000122 3.6e-24 115.9 195 37.9
Nitab4.5_0001381g0170 Nicotiana tabacum HOM05D000191 ORTHO05D000122 2.4e-23 113.2 204 38.2
Peaxi162Scf00102g01050 Petunia axillaris HOM05D000191 ORTHO05D000122 4.0e-23 112.5 207 40.6
Lj4g0009015 Lotus japonicus HOM05D000191 ORTHO05D000122 5.3e-23 112.1 205 36.6
Sc01g0008300 Simmondsia chinensis HOM05D000191 ORTHO05D000122 1.2e-22 110.9 183 38.8
CSS0027264 Camellia sinensis var. sinensis HOM05D000191 ORTHO05D000122 2.0e-22 110.2 206 39.8
Medtr4g100730 Medicago truncatula HOM05D000191 ORTHO05D000122 3.4e-22 109.4 206 38.3
MSTRG.12120 Avicennia marina HOM05D000191 ORTHO05D000122 5.8e-22 108.6 206 38.8
Migut.A01128 Erythranthe guttata HOM05D000191 ORTHO05D000122 5.8e-22 108.6 207 36.2
arahy.Tifrunner.gnm1.ann1.CJR1AW Arachis hypogaea HOM05D000191 ORTHO05D000122 7.6e-22 108.2 204 35.8
Glyma.17G143500 Glycine max HOM05D000191 ORTHO05D000122 9.9e-22 107.8 210 37.1
Hma1.2p1_0316F.1_g122890 Hydrangea macrophylla HOM05D000191 ORTHO05D000122 9.9e-22 107.8 204 38.7
Nitab4.5_0002289g0100 Nicotiana tabacum HOM05D000191 ORTHO05D000122 1.3e-21 107.5 208 37.0
Oeu040707.1 Olea europaea HOM05D000191 ORTHO05D000122 1.3e-21 107.5 204 36.3
CsaV3_5G004430 Cucumis sativus L. HOM05D000191 ORTHO05D000122 3.8e-21 105.9 208 35.1
Ca_21978_v3 Cicer arietinum L. HOM05D000191 ORTHO05D000122 4.9e-21 105.5 205 37.1
arahy.Tifrunner.gnm1.ann1.B87IR2 Arachis hypogaea HOM05D000191 ORTHO05D000122 1.1e-20 104.4 204 35.8
CAN.G673.12 Capsicum annuum HOM05D000191 ORTHO05D028468 1.1e-20 104.4 163 43.6
AUR62019972 Chenopodium quinoa HOM05D000191 ORTHO05D000122 1.9e-20 103.6 204 33.8
Duzib084G0991 Durio zibethinus HOM05D000191 ORTHO05D000122 4.2e-20 102.4 207 37.2
Lalb_Chr16g0386811 Lupinus albus HOM05D000191 ORTHO05D000122 9.3e-20 101.3 204 34.3
ClCG01G004230 Citrullus lanatus HOM05D000191 ORTHO05D000122 1.6e-19 100.5 202 33.2
Phvul.003G222300 Phaseolus vulgaris HOM05D000191 ORTHO05D000122 2.1e-19 100.1 205 32.2
AUR62007110 Chenopodium quinoa HOM05D000191 ORTHO05D000122 3.5e-19 99.4 204 34.8
Solyc08g078450.3 Solanum lycopersicum HOM05D000191 ORTHO05D000122 5.1e-18 95.5 188 38.3
Sopen08g026940 Solanum pennellii HOM05D000191 ORTHO05D000122 5.1e-18 95.5 191 37.7
Lj2A222T49 Lonicera japonica HOM05D000191 ORTHO05D000122 6.6e-18 95.1 146 44.5
Hund14576 Selenicereus undatus HOM05D000191 ORTHO05D000122 6.6e-18 95.1 182 34.6
PGSC0003DMG400004769 Solanum tuberosum HOM05D000191 ORTHO05D000122 6.6e-18 95.1 189 36.0
Atru.chr9.1282 Acer truncatum HOM05D000191 ORTHO05D000122 2.5e-17 93.2 205 35.1
CAN.G1178.21 Capsicum annuum HOM05D000191 ORTHO05D000122 7.3e-17 91.7 179 38.0
Nitab4.5_0025610g0010 Nicotiana tabacum HOM05D000191 ORTHO05D000122 7.3e-17 91.7 185 38.4
PSO782G0678 Papaver somniferum HOM05D000191 ORTHO05D031279 9.6e-17 91.3 167 37.1
COL.COLO4_37133 Corchorus olitorius HOM05D000191 ORTHO05D000122 1.3e-16 90.9 173 36.4
MBI04_g09527_MAGBIO Magnolia biondii HOM05D000191 ORTHO05D000122 1.3e-16 90.9 316 26.9
Hund11608 Selenicereus undatus HOM05D000191 ORTHO05D000122 1.3e-16 90.9 211 32.2
Psat4g072800 Pisum sativum HOM05D000191 ORTHO05D000122 2.1e-16 90.1 207 34.8
BcaC09g50408 Brassica carinata HOM05D000191 ORTHO05D000122 6.2e-16 88.6 208 35.6
DCAR_006842 Daucus carota HOM05D000191 ORTHO05D000122 8.1e-16 88.2 183 33.9
SalBow1G5739 Salvia bowleyana HOM05D000191 ORTHO05D000122 8.1e-16 88.2 209 32.5
VMungo0251G1444 Vigna mungo HOM05D000191 ORTHO05D000122 1.1e-15 87.8 196 30.6
CAN.G1178.25 Capsicum annuum HOM05D000191 ORTHO05D000122 6.9e-15 85.1 85 55.3
Gohir.A08G168700 Gossypium hirsutum HOM05D000191 ORTHO05D000122 3.4e-14 82.8 137 46.0
Gohir.D08G187200 Gossypium hirsutum HOM05D000191 ORTHO05D000122 3.4e-14 82.8 171 40.9
Gorai.004G196900 Gossypium raimondii HOM05D000191 ORTHO05D000122 3.4e-14 82.8 144 43.1
Actinidia02150 Actinidia chinensis HOM05D000191 ORTHO05D000122 5.8e-14 82.0 128 46.1
Aa31LG2G12920 Aethionema arabicum HOM05D000191 ORTHO05D000122 9.9e-14 81.3 207 30.9
TPR.G37635 Trifolium pratense HOM05D000191 ORTHO05D000122 9.9e-14 81.3 190 37.9
Cc08_g12190 Coffea canephora HOM05D000191 ORTHO05D000122 1.3e-13 80.9 191 34.0
ECA240G0143 Erigeron canadensis HOM05D000191 ORTHO05D000122 1.3e-13 80.9 184 34.8
C01p25810 Brassica napus HOM05D000191 ORTHO05D000122 1.7e-13 80.5 209 33.5
TPR.G12482 Trifolium pratense HOM05D000191 ORTHO05D000122 2.2e-13 80.1 206 33.0
BcaNung00154 Brassica carinata HOM05D000191 ORTHO05D000122 2.9e-13 79.7 204 33.8
CDE04G0751 Ceratophyllum demersum HOM05D000191 ORTHO05D000122 2.9e-13 79.7 220 28.6
CAN.G845.12 Capsicum annuum HOM05D000191 ORTHO05D028468 3.8e-13 79.3 124 42.7
ATR0057G010 Amborella trichopoda HOM05D000191 ORTHO05D000122 6.4e-13 78.6 321 28.3
BolC1t02529H Brassica oleracea HOM05D000191 ORTHO05D000122 5.4e-12 75.5 209 32.5
MELO3C005516.2 Cucumis melo HOM05D000191 ORTHO05D000122 5.4e-12 75.5 121 40.5
unitig_0.g1054 Utricularia gibba HOM05D000191 ORTHO05D000122 7.1e-12 75.1 184 31.0
HPP92_024711 Vanilla planifolia HOM05D000191 ORTHO05D000122 3.5e-11 72.8 49 63.3
Thhalv10024835m.g Eutrema salsugineum HOM05D000191 ORTHO05D000122 4.6e-11 72.4 211 31.3
FAN08G3174 Fragaria x ananassa HOM05D000191 ORTHO05D000122 1.3e-10 70.9 44 70.5
BcaNung02849 Brassica carinata HOM05D000191 ORTHO05D000122 1.8e-10 70.5 209 32.1
Zm00001eb334360 Zea mays HOM05D000191 ORTHO05D000122 5.1e-10 68.9 57 57.9
A01p20540 Brassica napus HOM05D000191 ORTHO05D000122 6.7e-10 68.6 208 31.2
BraA01t01983Z Brassica rapa HOM05D000191 ORTHO05D000122 6.7e-10 68.6 208 31.2
HanXRQChr03g0088841 Helianthus annuus HOM05D000191 ORTHO05D000122 8.7e-10 68.2 191 34.0
HPP92_009703 Vanilla planifolia HOM05D000191 ORTHO05D000122 2.5e-09 66.6 41 68.3
CARHR223310 Cardamine hirsuta HOM05D000191 ORTHO05D000122 5.6e-09 65.5 204 31.4
Carub.0007s2464 Capsella rubella HOM05D000191 ORTHO05D000122 7.4e-09 65.1 210 30.0
Lsat_1_v5_gn_6_92500 Lactuca sativa HOM05D000191 ORTHO05D000122 1.6e-08 63.9 189 34.9
Os01g0640600 Oryza sativa ssp. japonica HOM05D000191 ORTHO05D000122 1.6e-08 63.9 54 61.1
CDE11G0824 Ceratophyllum demersum HOM05D000191 ORTHO05D000122 2.8e-08 63.2 202 28.7
Os01g0107700 Oryza sativa ssp. japonica HOM05D000191 ORTHO05D000122 2.8e-08 63.2 79 45.6
THA.LOC104815502 Tarenaya hassleriana HOM05D000191 ORTHO05D000122 2.8e-08 63.2 207 28.5
HPP92_011611 Vanilla planifolia HOM05D000191 ORTHO05D000122 2.8e-08 63.2 188 33.5
Aqoxy6G01906 Aquilegia oxysepala HOM05D000191 ORTHO05D031279 4.8e-08 62.4 129 36.4
AL7G37960 Arabidopsis lyrata HOM05D000191 ORTHO05D000122 1.1e-07 61.2 60 51.7
Glyma.06G085300 Glycine max HOM05D000191 ORTHO05D000122 1.1e-07 61.2 47 63.8
Sp7g17380 Schrenkiella parvula HOM05D000191 ORTHO05D000122 1.1e-07 61.2 204 27.0
Lj8A577G36 Lonicera japonica HOM05D000191 ORTHO05D000122 1.4e-07 60.8 80 43.8
Lj8A586T43 Lonicera japonica HOM05D000191 ORTHO05D000122 1.4e-07 60.8 80 43.8
AT4G16745 Arabidopsis thaliana HOM05D000191 ORTHO05D000122 1.8e-07 60.5 203 32.5
ATR0705G012 Amborella trichopoda HOM05D000191 ORTHO05D000122 2.4e-07 60.1 44 61.4
Migut.E00839 Erythranthe guttata HOM05D000191 ORTHO05D000122 2.4e-07 60.1 166 30.1
Thecc.09G044400 Theobroma cacao HOM05D000191 ORTHO05D000122 2.4e-07 60.1 122 36.9
arahy.Tifrunner.gnm1.ann1.3X1J6L Arachis hypogaea HOM05D000191 ORTHO05D000122 3.1e-07 59.7 41 61.0
arahy.Tifrunner.gnm1.ann1.SPZ2MT Arachis hypogaea HOM05D000191 ORTHO05D000122 3.1e-07 59.7 41 61.0
Cpa.g.sc40.36 Carica papaya HOM05D000191 ORTHO05D000122 4.0e-07 59.3 45 60.0
Sed0009172 Sechium edule HOM05D000191 ORTHO05D000122 4.0e-07 59.3 41 63.4
HPP92_009701 Vanilla planifolia HOM05D000191 ORTHO05D000122 4.0e-07 59.3 49 57.1
ClCG09G007030 Citrullus lanatus HOM05D000191 ORTHO05D000122 5.3e-07 58.9 41 63.4
MELO3C015835.2 Cucumis melo HOM05D000191 ORTHO05D000122 6.9e-07 58.5 41 58.5
Ca_17351_v3 Cicer arietinum L. HOM05D000191 ORTHO05D000122 9.0e-07 58.2 52 57.7
Psat7g015760 Pisum sativum HOM05D000191 ORTHO05D000122 9.0e-07 58.2 52 53.8
FAN27G0963 Fragaria x ananassa HOM05D000191 ORTHO05D000122 1.2e-06 57.8 41 58.5
Phvul.009G109300 Phaseolus vulgaris HOM05D000191 ORTHO05D000122 1.5e-06 57.4 41 63.4
Lj4g0024261 Lotus japonicus HOM05D000191 ORTHO05D000122 2.6e-06 56.6 52 51.9
Lalb_Chr05g0223121 Lupinus albus HOM05D000191 ORTHO05D000122 2.6e-06 56.6 41 61.0
PGR044G0819 Punica granatum HOM05D000191 ORTHO05D000122 2.6e-06 56.6 41 65.9
VMungo0251G3195 Vigna mungo HOM05D000191 ORTHO05D000122 2.6e-06 56.6 41 63.4
CiPaw.03G226900 Carya illinoinensis HOM05D000191 ORTHO05D000122 3.4e-06 56.2 41 56.1
Lalb_Chr24g0402661 Lupinus albus HOM05D000191 ORTHO05D000122 3.4e-06 56.2 41 58.5
Phvul.002G310300 Phaseolus vulgaris HOM05D000191 ORTHO05D000122 3.4e-06 56.2 41 61.0
BcaC04g19362 Brassica carinata HOM05D000191 ORTHO05D000122 4.5e-06 55.8 41 61.0
C09p56510 Brassica napus HOM05D000191 ORTHO05D000122 4.5e-06 55.8 41 61.0
BolC9t58516H Brassica oleracea HOM05D000191 ORTHO05D000122 4.5e-06 55.8 41 61.0
Thhalv10013011m.g Eutrema salsugineum HOM05D000191 ORTHO05D000122 4.5e-06 55.8 41 61.0
MBI04_g27063_MAGBIO Magnolia biondii HOM05D000191 ORTHO05D000122 4.5e-06 55.8 50 52.0
GSVIVG01035630001 Vitis vinifera HOM05D000191 ORTHO05D000122 4.5e-06 55.8 41 58.5
A10p20050 Brassica napus HOM05D000191 ORTHO05D000122 5.8e-06 55.5 41 61.0
BraA10t44079Z Brassica rapa HOM05D000191 ORTHO05D000122 5.8e-06 55.5 41 61.0
Cfa013361 Carpinus fangiana HOM05D000191 ORTHO05D000122 5.8e-06 55.5 36 69.4
Lj7A702G37 Lonicera japonica HOM05D000191 ORTHO05D000122 5.8e-06 55.5 36 63.9
Lalb_Chr22g0360961 Lupinus albus HOM05D000191 ORTHO05D000122 5.8e-06 55.5 41 58.5
Lalb_Chr23g0269581 Lupinus albus HOM05D000191 ORTHO05D000122 5.8e-06 55.5 117 33.3
Sp2g21810 Schrenkiella parvula HOM05D000191 ORTHO05D000122 5.8e-06 55.5 41 65.9
Sp6g24710 Schrenkiella parvula HOM05D000191 ORTHO05D000122 5.8e-06 55.5 41 61.0
TPR.G23447 Trifolium pratense HOM05D000191 ORTHO05D000122 5.8e-06 55.5 52 53.8
BcaB04g19762 Brassica carinata HOM05D000191 ORTHO05D000122 7.6e-06 55.1 41 65.9
CsaV3_7G028130 Cucumis sativus L. HOM05D000191 ORTHO05D000122 7.6e-06 55.1 41 56.1
Glyma.05G228200 Glycine max HOM05D000191 ORTHO05D000122 7.6e-06 55.1 41 61.0
Psat5g021800 Pisum sativum HOM05D000191 ORTHO05D000122 7.6e-06 55.1 41 63.4
Lalb_Chr14g0362481 Lupinus albus HOM05D000191 ORTHO05D000122 9.9e-06 54.7 85 37.6
QL12p041580 Quercus lobata HOM05D000191 ORTHO05D000122 9.9e-06 54.7 41 56.1


User provided reference genes

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