Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 0.0e+00 1243.8 679 100.0
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 6.6e-208 728.0 687 62.0
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 4.3e-207 725.3 679 63.5
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 1.8e-205 719.9 688 64.1
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.2e-204 717.2 681 62.3
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 5.8e-204 714.9 674 62.8
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.3e-203 713.8 688 63.2
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 9.2e-202 707.6 687 64.2
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 3.9e-200 702.2 680 63.5
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 3.3e-199 699.1 674 61.9
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 4.7e-198 695.3 676 62.1
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 7.1e-194 681.4 680 61.9
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 3.5e-193 679.1 688 58.9
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 1.9e-191 673.3 580 66.4
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 2.1e-190 669.8 693 59.6
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 3.4e-188 662.5 675 60.1
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 7.6e-188 661.4 667 60.1
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 3.8e-187 659.1 685 60.0
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 5.4e-186 655.2 689 59.5
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 1.9e-183 646.7 691 58.6
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.3e-183 645.6 670 59.4
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 5.6e-183 645.2 672 60.4
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 4.5e-180 635.6 698 58.3
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 3.8e-179 632.5 684 57.9
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 1.9e-178 630.2 740 54.9
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 3.2e-178 629.4 679 55.4
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 5.4e-178 628.6 675 58.8
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 2.1e-177 626.7 676 57.1
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.3e-176 624.0 687 54.7
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 3.0e-176 622.9 697 57.1
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 8.7e-176 621.3 680 57.5
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 5.6e-175 618.6 686 57.0
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 7.4e-175 618.2 680 57.2
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 3.7e-174 615.9 685 55.0
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 1.8e-173 613.6 686 56.7
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 6.9e-173 611.7 681 55.9
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 9.0e-173 611.3 674 56.1
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.5e-172 610.5 676 53.1
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 4.5e-172 609.0 674 56.7
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 5.8e-172 608.6 684 57.3
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 1.7e-171 607.1 687 53.6
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 3.2e-170 602.8 676 56.1
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 5.5e-170 602.1 682 54.8
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 5.5e-170 602.1 686 54.7
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 5.5e-170 602.1 688 54.4
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 2.7e-169 599.7 692 52.6
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 4.6e-169 599.0 675 55.0
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 1.3e-168 597.4 675 55.4
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 3.0e-168 596.3 718 51.5
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 5.1e-168 595.5 686 52.9
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.9e-167 593.6 698 54.3
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 3.3e-167 592.8 696 53.4
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.8e-166 589.0 655 58.6
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.8e-165 587.0 682 52.3
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.2e-163 580.1 685 51.4
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 2.2e-163 580.1 669 55.5
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 2.9e-163 579.7 710 53.9
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 2.9e-163 579.7 676 54.7
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 1.9e-162 577.0 538 59.5
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 3.2e-162 576.2 576 60.9
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 4.6e-161 572.4 686 53.4
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 8.7e-160 568.2 684 53.5
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 1.5e-159 567.4 694 53.3
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 7.4e-159 565.1 670 54.0
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 1.3e-158 564.3 687 53.6
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 9.0e-157 558.1 673 50.1
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 7.7e-156 555.1 548 61.3
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 7.2e-154 548.5 669 52.6
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 9.4e-154 548.1 689 50.4
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.7e-153 546.6 666 52.9
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 2.5e-151 540.0 670 50.4
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 7.4e-151 538.5 674 51.6
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 2.2e-150 537.0 685 49.5
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 2.2e-150 537.0 677 51.0
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 5.0e-147 525.8 530 57.2
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.9e-146 523.9 532 57.0
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 3.3e-143 513.1 683 49.0
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 5.7e-143 512.3 643 48.5
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 1.3e-142 511.1 523 55.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 5.9e-140 502.3 701 47.5
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 5.5e-138 495.7 525 53.3
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.3e-134 484.6 534 52.6
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 1.3e-134 484.6 684 48.4
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 5.9e-132 475.7 686 45.9
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 1.3e-131 474.6 557 52.8
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 1.7e-131 474.2 516 52.3
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.5e-130 470.3 705 44.8
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 5.5e-130 469.2 578 54.0
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 5.5e-130 469.2 525 51.6
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 2.1e-129 467.2 691 44.7
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 1.4e-125 454.5 556 47.8
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 9.4e-122 441.8 549 51.7
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 5.2e-120 436.0 599 49.4
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 1.2e-119 434.9 516 50.6
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 1.2e-119 434.9 516 50.6
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 2.2e-118 430.6 518 48.3
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 3.6e-113 413.3 498 49.2
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.3e-107 394.0 539 46.9
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 3.2e-101 373.6 382 54.2
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 3.9e-99 366.7 457 48.4
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 9.2e-93 345.5 374 52.9
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.4e-88 331.6 685 38.4
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 6.0e-84 316.2 535 39.6
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.0e-83 315.5 629 39.7
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 7.1e-69 266.2 305 50.5
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 4.3e-66 256.9 538 35.9
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 5.5e-61 240.0 227 56.4
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 4.6e-52 210.3 484 33.1
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 7.9e-44 183.0 313 47.0
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 1.3e-33 149.1 483 32.5
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.8e-32 145.2 522 29.9
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 1.1e-24 119.4 168 47.6
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 9.4e-21 106.3 188 58.0
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 2.2e-09 68.6 50 62.0
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 1.1e-08 66.2 141 36.2
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.6e-07 62.4 96 43.8
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 2.9e-06 58.2 103 37.9


User provided reference genes

Program Settings