Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 0.0e+00 1322.4 656 100.0
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 1.9e-273 945.7 667 73.0
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 2.5e-273 945.3 674 72.1
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 9.7e-273 943.3 676 71.7
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 9.7e-273 943.3 674 72.1
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 1.6e-272 942.6 683 71.4
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 4.8e-272 941.0 676 71.9
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 5.3e-271 937.6 685 71.2
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 1.0e-269 933.3 677 71.5
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 1.1e-265 919.8 672 71.4
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 5.7e-265 917.5 673 70.1
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 2.2e-264 915.6 672 70.4
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 8.5e-261 903.7 707 67.3
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 7.2e-260 900.6 676 69.1
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 1.6e-259 899.4 676 68.2
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 7.9e-259 897.1 584 77.7
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 3.9e-258 894.8 678 68.0
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 5.1e-258 894.4 675 67.3
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 8.8e-258 893.6 680 68.5
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 1.5e-257 892.9 675 68.1
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.0e-257 892.5 680 68.4
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 2.6e-257 892.1 678 68.7
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 6.3e-256 887.5 670 69.1
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 2.4e-255 885.6 680 67.9
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.4e-255 885.6 678 67.7
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 5.3e-255 884.4 671 68.9
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 9.1e-255 883.6 679 68.5
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.2e-254 883.2 587 75.6
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 1.2e-254 883.2 670 68.8
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 4.5e-254 881.3 680 67.8
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 3.8e-253 878.2 680 67.6
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 5.0e-253 877.9 676 66.1
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 4.2e-252 874.8 698 65.5
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 4.2e-252 874.8 674 65.4
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 2.7e-251 872.1 682 67.2
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 4.7e-251 871.3 676 66.1
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 8.0e-251 870.5 674 66.2
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 1.1e-249 866.7 638 69.9
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 2.0e-249 865.9 673 65.7
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 2.0e-249 865.9 666 65.5
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.0e-249 865.9 667 67.8
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 2.6e-249 865.5 671 66.3
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 5.7e-249 864.4 675 66.1
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.7e-248 862.8 691 66.3
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 1.7e-248 862.8 678 65.2
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 4.1e-247 858.2 674 65.3
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 9.1e-247 857.1 687 65.1
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 2.6e-246 855.5 679 64.9
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 3.5e-246 855.1 682 64.8
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 5.9e-246 854.4 676 66.6
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 5.0e-245 851.3 676 66.3
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 3.2e-244 848.6 675 66.5
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 4.2e-244 848.2 676 66.3
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 4.2e-244 848.2 670 64.6
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 3.7e-240 835.1 654 66.4
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 3.7e-240 835.1 654 66.5
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 3.7e-240 835.1 701 62.8
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 4.1e-239 831.6 674 63.9
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 7.0e-239 830.9 607 70.0
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 5.0e-237 824.7 666 63.1
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 4.2e-236 821.6 671 63.5
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 2.7e-235 818.9 645 65.0
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 1.7e-232 809.7 710 60.3
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 2.8e-232 808.9 670 62.5
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 2.8e-232 808.9 645 64.2
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 5.0e-229 798.1 677 62.3
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 2.5e-228 795.8 678 62.2
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 5.5e-228 794.7 671 62.6
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 5.5e-228 794.7 676 62.3
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 9.5e-228 793.9 632 65.7
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 8.0e-227 790.8 673 62.9
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 4.0e-226 788.5 617 64.2
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 2.0e-225 786.2 580 68.1
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 2.6e-225 785.8 676 60.9
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 3.4e-225 785.4 618 64.4
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 4.4e-225 785.0 635 64.9
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 2.2e-224 782.7 670 62.2
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 1.6e-222 776.5 616 64.3
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 1.0e-221 773.9 615 64.2
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 1.7e-221 773.1 673 60.6
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 3.8e-221 771.9 677 60.7
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 5.0e-221 771.5 542 73.1
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 1.6e-219 766.5 612 62.7
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 1.2e-217 760.4 612 63.4
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 5.8e-217 758.1 648 61.9
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 2.2e-216 756.1 649 62.1
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 4.1e-215 751.9 584 68.5
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 5.2e-210 734.9 632 60.9
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 6.8e-210 734.6 668 60.0
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 1.2e-209 733.8 674 60.4
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 8.6e-205 717.6 655 59.4
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 4.7e-203 711.8 638 61.3
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 2.9e-200 702.6 635 59.7
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 7.3e-196 688.0 462 75.3
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 2.1e-190 669.8 618 56.8
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 4.3e-188 662.1 533 64.7
unitig_899.g15485 Utricularia gibba HOM05D006590 ORTHO05D008427 1.1e-170 604.4 618 52.9
Lj1C1015G5 Lonicera japonica HOM05D006590 ORTHO05D008427 6.7e-165 585.1 670 51.5
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 2.5e-156 556.6 643 49.0
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 3.7e-155 552.7 416 70.0
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 4.6e-150 535.8 457 63.5
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 1.3e-144 517.7 634 47.2
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 4.7e-142 509.2 360 68.9
SalBow4G1387 Salvia bowleyana HOM05D006590 ORTHO05D008427 1.2e-126 458.0 329 66.9
Sabra15G0013100 Salix brachista HOM05D006590 ORTHO05D008427 8.0e-102 375.6 260 74.2
CBR_g39728 Chara braunii HOM05D006590 ORTHO05D008427 2.0e-84 317.8 883 30.0
Potri.015G016500 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.6e-84 317.4 325 54.2
Actinidia33527 Actinidia chinensis HOM05D006590 ORTHO05D008427 7.8e-73 279.3 334 50.9
Potri.015G016600 Populus trichocarpa HOM05D006590 ORTHO05D008427 3.5e-57 227.3 158 70.9
Sabra15G0012800 Salix brachista HOM05D006590 ORTHO05D008427 1.4e-50 205.3 149 68.5
BcaC04g19592 Brassica carinata HOM05D006590 ORTHO05D008427 7.2e-42 176.4 122 73.0
Potri.015G016375 Populus trichocarpa HOM05D006590 ORTHO05D008427 4.6e-41 173.7 144 64.6
Hund04856 Selenicereus undatus HOM05D006590 ORTHO05D008427 7.4e-39 166.4 189 53.4
Potri.015G016300 Populus trichocarpa HOM05D006590 ORTHO05D008427 8.2e-30 136.3 116 64.7
Actinidia34212 Actinidia chinensis HOM05D006590 ORTHO05D008427 1.8e-29 135.2 74 86.5
COL.COLO4_02893 Corchorus olitorius HOM05D006590 ORTHO05D008427 2.3e-24 118.2 61 90.2
Hma1.2p1_0404F.1_g145520 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 6.5e-19 100.1 61 82.0
CDE10G1176 Ceratophyllum demersum HOM05D006590 ORTHO05D008427 3.2e-18 97.8 58 75.9
Lsat_1_v5_gn_2_64600 Lactuca sativa HOM05D006590 ORTHO05D011991 1.6e-12 79.0 63 60.3
Aqoxy2G01300 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 1.7e-11 75.5 47 70.2
Sabra10G0098600 Salix brachista HOM05D002406 ORTHO05D007964 9.4e-10 69.7 348 23.9
AagrBONN_evm.TU.Sc2ySwM_117.16 Anthoceros agrestis HOM05D002406 ORTHO05D007964 8.0e-09 66.6 267 22.5
CAN.G37.10 Capsicum annuum HOM05D006590 ORTHO05D008427 1.0e-08 66.2 56 55.4
unitig_52.g17148 Utricularia gibba HOM05D002406 ORTHO05D007964 3.0e-08 64.7 345 22.9
Sabra08G0088500 Salix brachista HOM05D002406 ORTHO05D007964 9.8e-07 59.7 298 24.5
CSS0033832 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 2.2e-06 58.5 198 23.7
CSS0035809 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 2.2e-06 58.5 198 23.7
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 4.8e-06 57.4 208 25.0
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 4.8e-06 57.4 198 22.7
Ciclev10031094m.g Citrus clementina HOM05D002406 ORTHO05D007964 6.3e-06 57.0 350 24.6


User provided reference genes

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