Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0996 Trochodendron aralioides HOM05D003238 ORTHO05D003571 6.3e-28 126.7 64 100.0
TAR624G0020 Trochodendron aralioides HOM05D003238 ORTHO05D003571 1.3e-25 119.0 64 93.8
TAR362G1092 Trochodendron aralioides HOM05D003238 ORTHO05D003571 5.6e-24 113.6 64 90.6
CiPaw.02G138700 Carya illinoinensis HOM05D003238 ORTHO05D003571 3.3e-16 87.8 60 68.3
SGA_v2.0_scaffold10G05235 Striga asiatica HOM05D002348 ORTHO05D002512 4.7e-15 84.0 57 73.7
Prupe.3G046400 Prunus persica HOM05D003238 ORTHO05D003571 6.2e-15 83.6 63 63.5
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 1.0e-14 82.8 60 68.3
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 2.3e-14 81.6 64 64.1
RcHm_v2.0_Chr2g0144001 Rosa chinensis HOM05D003238 ORTHO05D003571 6.8e-14 80.1 63 63.5
PGR142G0437 Punica granatum HOM05D003238 ORTHO05D003571 1.5e-13 79.0 56 71.4
Oeu004201.1 Olea europaea HOM05D003238 ORTHO05D003571 2.0e-13 78.6 64 64.1
THA.LOC104813494 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 5.8e-13 77.0 61 63.9
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 9.8e-13 76.3 56 66.1
FAN14G3690 Fragaria x ananassa HOM05D003238 ORTHO05D003571 9.8e-13 76.3 64 59.4
TWI63G0468 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 9.8e-13 76.3 61 63.9
Migut.D00960 Erythranthe guttata HOM05D003238 ORTHO05D003571 2.2e-12 75.1 51 64.7
FvH4_6g33970 Fragaria vesca HOM05D003238 ORTHO05D003571 2.2e-12 75.1 64 59.4
FAN09G2388 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.2e-12 75.1 64 59.4
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 2.9e-12 74.7 59 67.8
HanXRQChr04g0126171 Helianthus annuus HOM05D003238 ORTHO05D003571 3.7e-12 74.3 58 63.8
SalBow6G6091 Salvia bowleyana HOM05D003238 ORTHO05D003571 3.7e-12 74.3 48 72.9
FAN05G5076 Fragaria x ananassa HOM05D003238 ORTHO05D003571 4.9e-12 73.9 64 57.8
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 6.4e-12 73.6 53 71.7
Potri.004G095300 Populus trichocarpa HOM05D003238 ORTHO05D003571 8.3e-12 73.2 60 60.0
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.1e-11 72.8 55 58.2
Ciclev10009462m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.1e-11 72.8 55 69.1
Migut.J00580 Erythranthe guttata HOM05D003238 ORTHO05D003571 1.1e-11 72.8 49 73.5
arahy.Tifrunner.gnm1.ann1.57GLQM Arachis hypogaea HOM05D003238 ORTHO05D003571 2.4e-11 71.6 57 63.2
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 2.4e-11 71.6 65 56.9
RcHm_v2.0_Chr3g0459511 Rosa chinensis HOM05D003238 ORTHO05D003571 2.4e-11 71.6 54 63.0
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 4.1e-11 70.9 52 67.3
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 4.1e-11 70.9 63 57.1
MSTRG.6003 Avicennia marina HOM05D003238 ORTHO05D003571 5.4e-11 70.5 56 66.1
DCAR_031341 Daucus carota HOM05D003238 ORTHO05D003571 5.4e-11 70.5 55 63.6
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 7.0e-11 70.1 53 66.0
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 7.0e-11 70.1 53 66.0
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 7.0e-11 70.1 49 71.4
COL.COLO4_18181 Corchorus olitorius HOM05D003238 ORTHO05D003571 9.2e-11 69.7 48 66.7
Thhalv10014757m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 9.2e-11 69.7 65 55.4
BcaB08g36028 Brassica carinata HOM05D003238 ORTHO05D003571 1.2e-10 69.3 65 53.8
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 1.2e-10 69.3 56 60.7
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 1.2e-10 69.3 65 58.5
Ca_26161_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.6e-10 68.9 56 60.7
Psat1g140480 Pisum sativum HOM05D003238 ORTHO05D003571 1.6e-10 68.9 56 62.5
A03p13050 Brassica napus HOM05D003238 ORTHO05D003571 2.0e-10 68.6 62 54.8
BraA03t10615Z Brassica rapa HOM05D003238 ORTHO05D003571 2.0e-10 68.6 62 54.8
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 2.0e-10 68.6 64 59.4
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.0e-10 68.6 64 59.4
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.0e-10 68.6 64 59.4
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.0e-10 68.6 64 59.4
ClCG05G000830 Citrullus lanatus HOM05D003238 ORTHO05D003571 2.7e-10 68.2 60 58.3
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.7e-10 68.2 64 59.4
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 2.7e-10 68.2 52 63.5
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 2.7e-10 68.2 52 63.5
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 4.6e-10 67.4 64 59.4
MSTRG.4775 Avicennia marina HOM05D003238 ORTHO05D003571 6.0e-10 67.0 54 57.4
HPP92_006473 Vanilla planifolia HOM05D003238 ORTHO05D003571 6.0e-10 67.0 46 71.7
C09p48650 Brassica napus HOM05D003238 ORTHO05D003571 7.8e-10 66.6 68 52.9
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 7.8e-10 66.6 61 57.4
ECA236G3496 Erigeron canadensis HOM05D003238 ORTHO05D003571 7.8e-10 66.6 55 60.0
Phvul.009G231100 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 7.8e-10 66.6 52 57.7
BcaC04g20028 Brassica carinata HOM05D003238 ORTHO05D003571 1.3e-09 65.9 70 51.4
BolC9t57711H Brassica oleracea HOM05D003238 ORTHO05D003571 1.3e-09 65.9 70 51.4
CANSAT56G2721 Cannabis sativa HOM05D003238 ORTHO05D003571 1.7e-09 65.5 54 63.0
Sed0010916 Sechium edule HOM05D003238 ORTHO05D003571 1.7e-09 65.5 58 56.9
Carub.0002s1954 Capsella rubella HOM05D003238 ORTHO05D003571 2.3e-09 65.1 49 59.2
TPR.G13426 Trifolium pratense HOM05D003238 ORTHO05D003571 2.3e-09 65.1 44 70.5
Os09g0363700 Oryza sativa ssp. japonica HOM05D003238 ORTHO05D003571 3.0e-09 64.7 52 61.5
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 5.0e-09 63.9 62 51.6
arahy.Tifrunner.gnm1.ann1.ZSY109 Arachis hypogaea HOM05D003238 ORTHO05D003571 1.1e-08 62.8 45 68.9
Lsat_1_v5_gn_8_86760 Lactuca sativa HOM05D003238 ORTHO05D003571 1.1e-08 62.8 55 61.8
MELO3C006025.2 Cucumis melo HOM05D003238 ORTHO05D003571 1.5e-08 62.4 50 64.0
DCAR_031339 Daucus carota HOM05D003238 ORTHO05D003571 1.5e-08 62.4 52 61.5
CARHR270740 Cardamine hirsuta HOM05D003238 ORTHO05D003571 1.9e-08 62.0 53 56.6
Glyma.15G170900 Glycine max HOM05D003238 ORTHO05D003571 3.3e-08 61.2 56 57.1
Sp6g18700 Schrenkiella parvula HOM05D003238 ORTHO05D003571 3.3e-08 61.2 62 53.2
Lalb_Chr08g0232341 Lupinus albus HOM05D003238 ORTHO05D003571 4.3e-08 60.8 63 46.0
MD09G1190500 Malus domestica HOM05D003238 ORTHO05D003571 4.3e-08 60.8 49 55.1
HanXRQChr06g0178591 Helianthus annuus HOM05D003238 ORTHO05D003571 5.6e-08 60.5 50 58.0
Sc14g0000680 Simmondsia chinensis HOM05D051806 ORTHO05D003571 7.3e-08 60.1 49 57.1
unitig_26.g9174 Utricularia gibba HOM05D003238 ORTHO05D003571 7.3e-08 60.1 50 62.0
Zm00001eb310990 Zea mays HOM05D003238 ORTHO05D003571 7.3e-08 60.1 47 63.8
CsaV3_3G008070 Cucumis sativus L. HOM05D003238 ORTHO05D003571 1.6e-07 58.9 50 62.0
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 1.6e-07 58.9 49 63.3
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 2.8e-07 58.2 59 45.8
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 2.8e-07 58.2 76 51.3
Lsat_1_v5_gn_1_35700 Lactuca sativa HOM05D003238 ORTHO05D003571 3.6e-07 57.8 49 57.1
Sed0023757 Sechium edule HOM05D003238 ORTHO05D003571 3.6e-07 57.8 49 61.2
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 4.7e-07 57.4 62 48.4
Lj6g0026431 Lotus japonicus HOM05D003238 ORTHO05D003571 8.1e-07 56.6 56 55.4
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 8.1e-07 56.6 74 47.3
BcaB05g22307 Brassica carinata HOM05D003238 ORTHO05D003571 1.4e-06 55.8 64 45.3
HanXRQChr02g0031751 Helianthus annuus HOM05D003238 ORTHO05D003571 1.4e-06 55.8 45 60.0
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.8e-06 55.5 62 46.8
Sabra04G0064600 Salix brachista HOM05D003238 ORTHO05D003571 1.8e-06 55.5 59 50.8
HPP92_006471 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.3e-06 55.1 45 60.0
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 3.1e-06 54.7 64 46.9
Aa31LG7G2200 Aethionema arabicum HOM05D003238 ORTHO05D003571 4.0e-06 54.3 45 55.6
Atru.chr1.3787 Acer truncatum HOM05D003238 ORTHO05D003571 5.2e-06 53.9 62 46.8
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 5.2e-06 53.9 58 46.6
Thhalv10019375m.g Eutrema salsugineum HOM05D003238 ORTHO05D003571 8.9e-06 53.1 59 45.8


User provided reference genes

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