Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0988 Trochodendron aralioides HOM05D008679 ORTHO05D010804 1.8e-257 892.1 451 100.0
TAR374G0287 Trochodendron aralioides HOM05D008679 ORTHO05D010804 4.9e-175 618.2 452 72.6
Dinv38933 Davidia involucrata HOM05D008679 ORTHO05D010804 5.5e-86 322.4 419 45.1
Actinidia14568 Actinidia chinensis HOM05D008679 ORTHO05D010804 4.0e-68 263.1 425 38.4
Actinidia01999 Actinidia chinensis HOM05D008679 ORTHO05D010804 2.2e-66 257.3 432 38.7
Hma1.2p1_0896F.1_g234080 Hydrangea macrophylla HOM05D008679 ORTHO05D010804 1.1e-65 255.0 431 37.4
QL12p032781 Quercus lobata HOM05D008679 ORTHO05D010804 2.1e-64 250.8 587 32.4
Cfa012221 Carpinus fangiana HOM05D008679 ORTHO05D010804 3.9e-55 219.9 577 32.4
MBI17_g24686_MAGBIO Magnolia biondii HOM05D008679 ORTHO05D010804 6.6e-55 219.2 452 36.1
Lj2P184T43 Lonicera japonica HOM05D008679 ORTHO05D010804 1.9e-54 217.6 437 35.2
Dinv37632 Davidia involucrata HOM05D008679 ORTHO05D010804 9.6e-54 215.3 434 34.3
vmacro11364 Vaccinium macrocarpon HOM05D005554 ORTHO05D007823 8.9e-52 208.8 436 34.6
Rhsim02G0231800 Rhododendron simsii HOM05D008679 ORTHO05D010804 1.1e-49 201.8 446 32.1
CiPaw.11G134300 Carya illinoinensis HOM05D008679 ORTHO05D010804 9.2e-49 198.7 431 33.9
Thecc.03G280000 Theobroma cacao HOM05D008679 ORTHO05D010804 1.7e-47 194.5 531 29.8
Potri.001G103200 Populus trichocarpa HOM05D008679 ORTHO05D010804 8.7e-47 192.2 578 28.7
Ciclev10019505m.g Citrus clementina HOM05D008679 ORTHO05D010804 3.6e-45 186.8 549 29.5
Nn1g01544 Nelumbo nucifera HOM05D008679 ORTHO05D010804 8.1e-45 185.7 284 44.7
TWI15G0527 Tripterygium wilfordii HOM05D008679 ORTHO05D010804 3.4e-43 180.3 526 30.8
Prupe.5G101200 Prunus persica HOM05D008679 ORTHO05D010804 9.9e-43 178.7 560 30.5
Potri.003G128400 Populus trichocarpa HOM05D008679 ORTHO05D010804 2.4e-41 174.1 573 28.1
Duzib205G1921 Durio zibethinus HOM05D008679 ORTHO05D010804 6.0e-40 169.5 561 29.1
RcHm_v2.0_Chr7g0197481 Rosa chinensis HOM05D008679 ORTHO05D010804 1.0e-39 168.7 571 27.8
Haze_08788 Corylus avellana HOM05D005554 ORTHO05D007823 1.1e-38 165.2 406 32.8
Duzib084G0348 Durio zibethinus HOM05D008679 ORTHO05D010804 1.5e-38 164.9 571 28.5
Nn6g33405 Nelumbo nucifera HOM05D008679 ORTHO05D010804 2.5e-38 164.1 307 39.7
Sabra01G0077900 Salix brachista HOM05D008679 ORTHO05D010804 5.8e-35 152.9 589 25.6
Manes.02G019900 Manihot esculenta HOM05D008679 ORTHO05D010804 1.6e-32 144.8 580 25.9
Cpa.g.sc74.7 Carica papaya HOM05D008679 ORTHO05D010804 6.7e-31 139.4 533 28.3
FAN13G2706 Fragaria x ananassa HOM05D005554 ORTHO05D007823 2.8e-29 134.0 572 25.7
FAN04G2302 Fragaria x ananassa HOM05D008679 ORTHO05D010804 1.8e-28 131.3 585 25.0
FAN08G1707 Fragaria x ananassa HOM05D008679 ORTHO05D010804 1.8e-28 131.3 572 25.0
FvH4_5g02611 Fragaria vesca HOM05D008679 ORTHO05D010804 2.9e-26 124.0 572 24.7
MD06G1085200 Malus domestica HOM05D008679 ORTHO05D010804 6.5e-26 122.9 465 28.8
FAN18G1823 Fragaria x ananassa HOM05D008679 ORTHO05D010804 1.1e-25 122.1 572 24.7
Gohir.D12G231200 Gossypium hirsutum HOM05D008679 ORTHO05D010804 1.9e-22 111.3 539 26.0
Gorai.008G247400 Gossypium raimondii HOM05D008679 ORTHO05D010804 5.7e-22 109.8 542 26.0
Lj2C0T7 Lonicera japonica HOM05D008679 ORTHO05D010804 1.3e-21 108.6 199 37.2
COL.COLO4_34476 Corchorus olitorius HOM05D008679 ORTHO05D010804 1.6e-21 108.2 519 26.6
DCAR_000618 Daucus carota HOM05D008679 ORTHO05D010804 1.1e-20 105.5 447 26.0
Sabra03G0091300 Salix brachista HOM05D008679 ORTHO05D010804 3.4e-19 100.5 267 31.5
Oeu007747.1 Olea europaea HOM05D008679 ORTHO05D010804 5.8e-19 99.8 434 27.0
Gohir.A12G230100 Gossypium hirsutum HOM05D008679 ORTHO05D010804 1.2e-16 92.0 537 24.8
SGA_v2.0_scaffold360G49893 Striga asiatica HOM05D033559 ORTHO05D000309 5.9e-11 73.2 448 23.7
PGR031G2708 Punica granatum HOM05D008679 ORTHO05D010804 5.5e-09 66.6 428 26.4
Carub.0007s3417 Capsella rubella HOM05D012463 ORTHO05D014408 3.6e-08 63.9 172 29.1


User provided reference genes

Program Settings