Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 2.1e-84 317.4 154 100.0
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 3.1e-83 313.5 154 99.4
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 1.7e-28 131.7 142 51.4
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 8.2e-28 129.4 148 52.0
Actinidia08731 Actinidia chinensis HOM05D007456 ORTHO05D009411 2.1e-23 114.8 140 44.3
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 1.4e-22 112.1 129 47.3
MSTRG.26940 Avicennia marina HOM05D007456 ORTHO05D009411 3.0e-22 110.9 139 43.2
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 6.7e-22 109.8 77 62.3
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 2.0e-21 108.2 79 68.4
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 3.3e-21 107.5 158 44.9
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 5.7e-21 106.7 157 43.9
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 5.7e-21 106.7 77 63.6
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 1.3e-20 105.5 158 43.7
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 1.7e-20 105.1 156 44.2
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 2.8e-20 104.4 148 43.2
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 3.7e-20 104.0 77 59.7
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 3.7e-20 104.0 77 59.7
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 4.8e-20 103.6 77 59.7
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 6.3e-20 103.2 77 61.0
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 6.3e-20 103.2 77 61.0
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 1.1e-19 102.4 158 43.7
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 1.4e-19 102.1 77 62.3
Aqoxy3G00913 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 5.3e-19 100.1 88 56.8
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 5.3e-19 100.1 140 45.0
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 7.0e-19 99.8 144 45.8
vmacro06487 Vaccinium macrocarpon HOM05D007456 ORTHO05D009411 5.9e-18 96.7 87 57.5
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 6.5e-17 93.2 78 61.5
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 1.5e-16 92.0 80 58.8
AUR62005926 Chenopodium quinoa HOM05D007456 ORTHO05D009411 1.9e-16 91.7 150 38.7
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 1.6e-15 88.6 81 55.6
QL09p026466 Quercus lobata HOM05D007456 ORTHO05D009411 1.6e-15 88.6 112 45.5
QL09p026540 Quercus lobata HOM05D007456 ORTHO05D009411 1.6e-15 88.6 112 45.5
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 2.7e-15 87.8 61 65.6
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 2.7e-15 87.8 61 65.6
EL10Ac3g05110 Beta vulgaris HOM05D007456 ORTHO05D009411 4.7e-15 87.0 76 48.7
Ah.07g203680 Amaranthus hybridus HOM05D007456 ORTHO05D009411 8.0e-15 86.3 130 40.0
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 1.8e-14 85.1 70 57.1
MBI13_g23885_MAGBIO Magnolia biondii HOM05D007456 ORTHO05D009411 3.0e-14 84.3 151 35.1
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 3.0e-14 84.3 107 46.7
PGR142G2334 Punica granatum HOM05D007456 ORTHO05D009411 4.0e-14 84.0 76 57.9
SGA_v2.0_scaffold44G16881 Striga asiatica HOM05D007456 ORTHO05D009411 4.0e-14 84.0 137 40.9
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 6.7e-14 83.2 70 57.1
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 6.7e-14 83.2 70 57.1
Hma1.2p1_0758F.1_g213530 Hydrangea macrophylla HOM05D007456 ORTHO05D009411 8.8e-14 82.8 68 64.7
CSS0006842 Camellia sinensis var. sinensis HOM05D007456 ORTHO05D009411 2.0e-13 81.6 49 79.6
Glyma.01G230600 Glycine max HOM05D007456 ORTHO05D009411 2.6e-13 81.3 91 48.4
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 3.3e-13 80.9 70 57.1
AUR62018885 Chenopodium quinoa HOM05D007456 ORTHO05D009411 3.3e-13 80.9 68 54.4
FvH4_1g26290 Fragaria vesca HOM05D000003 ORTHO05D010713 3.3e-13 80.9 52 67.3
FAN19G0065 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.3e-13 80.9 52 67.3
Glyma.11G013600 Glycine max HOM05D007456 ORTHO05D009411 3.3e-13 80.9 129 43.4
Lj1C1032G4 Lonicera japonica HOM05D007456 ORTHO05D009411 4.4e-13 80.5 121 38.0
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 5.7e-13 80.1 67 56.7
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 5.7e-13 80.1 66 56.1
Lsat_1_v5_gn_4_134121 Lactuca sativa HOM05D007456 ORTHO05D009411 5.7e-13 80.1 65 60.0
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 5.7e-13 80.1 70 52.9
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 9.7e-13 79.3 70 57.1
RcHm_v2.0_Chr1g0383651 Rosa chinensis HOM05D007456 ORTHO05D009411 1.7e-12 78.6 53 71.7
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 2.2e-12 78.2 67 52.2
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 3.7e-12 77.4 70 55.7
Manes.08G164911 Manihot esculenta HOM05D007456 ORTHO05D009411 3.7e-12 77.4 120 40.0
CiPaw.06G020600 Carya illinoinensis HOM05D007456 ORTHO05D009411 1.1e-11 75.9 55 65.5
Haze_00583 Corylus avellana HOM05D007456 ORTHO05D009411 1.4e-11 75.5 120 38.3
CDE02G0006 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 2.4e-11 74.7 53 67.9
Sc19g0000290 Simmondsia chinensis HOM05D007456 ORTHO05D009411 3.1e-11 74.3 134 35.8
Atru.BG.267.p Acer truncatum HOM05D007456 ORTHO05D009411 4.1e-11 73.9 52 67.3
CDE02G0352 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 5.3e-11 73.6 53 66.0
Cc11_g03880 Coffea canephora HOM05D007456 ORTHO05D009411 7.0e-11 73.2 59 62.7
FAN01G1025 Fragaria x ananassa HOM05D007456 ORTHO05D009411 9.1e-11 72.8 54 61.1
HanXRQChr09g0260511 Helianthus annuus HOM05D007456 ORTHO05D009411 3.5e-10 70.9 61 55.7
Cfa015911 Carpinus fangiana HOM05D007456 ORTHO05D009411 2.9e-09 67.8 120 36.7
Ciclev10011504m.g Citrus clementina HOM05D007456 ORTHO05D009411 2.9e-09 67.8 107 43.0
PSO210G3824 Papaver somniferum HOM05D006705 ORTHO05D008179 8.5e-09 66.2 87 39.1
Atru.chr13.134 Acer truncatum HOM05D006705 ORTHO05D008179 1.9e-08 65.1 99 36.4
PSO170G2138 Papaver somniferum HOM05D006705 ORTHO05D008179 1.9e-08 65.1 87 39.1
Sabra05G0193800 Salix brachista HOM05D006705 ORTHO05D008179 2.5e-08 64.7 79 41.8
SalBow4G3145 Salvia bowleyana HOM05D007456 ORTHO05D009411 2.5e-08 64.7 51 56.9
Sabra02G0008200 Salix brachista HOM05D006705 ORTHO05D008179 4.2e-08 63.9 80 41.2
DCAR_010527 Daucus carota HOM05D006163 ORTHO05D007625 5.5e-08 63.5 93 37.6
FAN20G2687 Fragaria x ananassa HOM05D000148 ORTHO05D008179 5.5e-08 63.5 76 43.4
ECA232G0132 Erigeron canadensis HOM05D006705 ORTHO05D008179 7.2e-08 63.2 84 41.7
FvH4_5g30181 Fragaria vesca HOM05D006705 ORTHO05D008179 9.4e-08 62.8 79 41.8
PSO063G1989 Papaver somniferum HOM05D035557 ORTHO05D028426 9.4e-08 62.8 108 38.9
PSO782G5634 Papaver somniferum HOM05D035557 ORTHO05D028426 2.1e-07 61.6 104 40.4
Rhsim06G0007500 Rhododendron simsii HOM05D006705 ORTHO05D008179 2.7e-07 61.2 79 39.2
Eucgr.K00103 Eucalyptus grandis HOM05D007456 ORTHO05D009411 3.6e-07 60.8 43 65.1
Dinv05535 Davidia involucrata HOM05D006705 ORTHO05D008179 6.1e-07 60.1 67 44.8
Ciclev10000451m.g Citrus clementina HOM05D006705 ORTHO05D008179 8.0e-07 59.7 68 41.2
PSO591G0267 Papaver somniferum HOM05D035557 ORTHO05D028426 8.0e-07 59.7 108 38.9
QL02p014030 Quercus lobata HOM05D006705 ORTHO05D008179 8.0e-07 59.7 68 42.6
CSS0004504 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 1.0e-06 59.3 68 42.6
CSS0019684 Camellia sinensis var. sinensis HOM05D006705 ORTHO05D008179 1.0e-06 59.3 68 42.6
Cpa.g.sc26.199 Carica papaya HOM05D006705 ORTHO05D008179 1.0e-06 59.3 75 40.0
ClCG08G009460 Citrullus lanatus HOM05D006705 ORTHO05D008179 1.0e-06 59.3 88 38.6
CDE02G1751 Ceratophyllum demersum HOM05D006705 ORTHO05D008179 1.4e-06 58.9 79 39.2
MD12G1003200 Malus domestica HOM05D006705 ORTHO05D008179 1.8e-06 58.5 64 43.8
Nn5g30939 Nelumbo nucifera HOM05D006705 ORTHO05D008179 1.8e-06 58.5 88 37.5
RcHm_v2.0_Chr6g0304261 Rosa chinensis HOM05D006705 ORTHO05D008179 2.3e-06 58.2 65 44.6
THA.LOC104825423 Tarenaya hassleriana HOM05D006705 ORTHO05D008179 2.3e-06 58.2 68 41.2
BcaC02g09522 Brassica carinata HOM05D007456 ORTHO05D009411 3.0e-06 57.8 46 60.9
Prupe.2G323300 Prunus persica HOM05D007456 ORTHO05D009411 3.0e-06 57.8 118 35.6
Sc15g0004450 Simmondsia chinensis HOM05D006705 ORTHO05D008179 3.0e-06 57.8 79 39.2
CAN.G985.2 Capsicum annuum HOM05D006705 ORTHO05D008179 4.0e-06 57.4 64 40.6
Migut.F00108 Erythranthe guttata HOM05D007456 ORTHO05D009411 4.0e-06 57.4 52 51.9
MD01G1232900 Malus domestica HOM05D007456 ORTHO05D009411 4.0e-06 57.4 42 64.3
Lalb_Chr11g0061641 Lupinus albus HOM05D006705 ORTHO05D008179 5.2e-06 57.0 68 41.2
MELO3C026541.2 Cucumis melo HOM05D006705 ORTHO05D008179 6.8e-06 56.6 88 37.5
Hund05113 Selenicereus undatus HOM05D006705 ORTHO05D008179 6.8e-06 56.6 68 39.7
DCAR_013913 Daucus carota HOM05D006705 ORTHO05D008179 8.8e-06 56.2 69 39.1
Lsat_1_v5_gn_8_26180 Lactuca sativa HOM05D006705 ORTHO05D008179 8.8e-06 56.2 68 35.3
Lsat_1_v5_gn_9_45140 Lactuca sativa HOM05D006705 ORTHO05D008179 8.8e-06 56.2 68 39.7
Sed0011006 Sechium edule HOM05D006705 ORTHO05D008179 8.8e-06 56.2 68 39.7


User provided reference genes

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