Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TAR291G0003 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.6e-24 114.8 68 100.0
TAR375G0878 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.6e-24 114.8 68 100.0
TAR291G0001 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.8e-23 110.9 68 97.1
TAR375G0339 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.8e-23 110.9 68 97.1
TAR376G0113 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.2e-18 95.1 70 85.7
TAR376G0475 Trochodendron aralioides HOM05D008758 ORTHO05D009412 8.3e-18 93.2 70 84.3
TAR376G0381 Trochodendron aralioides HOM05D008758 ORTHO05D009412 1.1e-17 92.8 70 82.9
TAR376G0271 Trochodendron aralioides HOM05D003939 ORTHO05D009412 1.6e-16 89.0 70 81.4
TAR376G0225 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.0e-16 88.6 70 80.0
TAR633G0918 Trochodendron aralioides HOM05D008758 ORTHO05D009412 2.2e-15 85.1 70 75.7
TAR376G0356 Trochodendron aralioides HOM05D003939 ORTHO05D009412 8.5e-15 83.2 71 78.9
Nn2g15429 Nelumbo nucifera HOM05D008758 ORTHO05D009412 3.7e-10 67.8 72 69.4
PGSC0003DMG400027225 Solanum tuberosum HOM05D008319 ORTHO05D009412 3.7e-10 67.8 68 55.9
Potri.016G052200 Populus trichocarpa HOM05D008758 ORTHO05D009412 8.3e-10 66.6 70 61.4
Atru.chr1.980 Acer truncatum HOM05D008758 ORTHO05D009412 1.1e-09 66.2 70 58.6
Nn7g36171 Nelumbo nucifera HOM05D008758 ORTHO05D009412 1.4e-09 65.9 70 64.3
Atru.chr1.1009 Acer truncatum HOM05D008758 ORTHO05D009412 1.8e-09 65.5 70 57.1
Atru.chr1.1012 Acer truncatum HOM05D008758 ORTHO05D009412 1.8e-09 65.5 70 60.0
Atru.chr1.977 Acer truncatum HOM05D008758 ORTHO05D009412 1.8e-09 65.5 70 57.1
Solyc05g053060.1 Solanum lycopersicum HOM05D008319 ORTHO05D009412 7.0e-09 63.5 68 54.4
Sopen05g031580 Solanum pennellii HOM05D008319 ORTHO05D009412 7.0e-09 63.5 68 54.4
Atru.chr1.1010 Acer truncatum HOM05D008758 ORTHO05D009412 9.1e-09 63.2 70 58.6
Atru.chr1.1011 Acer truncatum HOM05D008758 ORTHO05D009412 9.1e-09 63.2 70 57.1
Nitab4.5_0003074g0030 Nicotiana tabacum HOM05D008319 ORTHO05D009412 1.2e-08 62.8 68 58.8
Peaxi162Scf00164g01135 Petunia axillaris HOM05D008319 ORTHO05D009412 2.0e-08 62.0 68 52.9
Atru.chr1.1014 Acer truncatum HOM05D008758 ORTHO05D009412 2.7e-08 61.6 63 58.7
TAR633G0082 Trochodendron aralioides HOM05D008758 ORTHO05D009412 3.5e-08 61.2 47 76.6
PGSC0003DMG400008180 Solanum tuberosum HOM05D008319 ORTHO05D009412 4.5e-08 60.8 68 52.9
Nn2g15426 Nelumbo nucifera HOM05D020325 ORTHO05D010948 1.0e-07 59.7 70 58.6
Atru.chr1.978 Acer truncatum HOM05D008758 ORTHO05D009412 1.3e-07 59.3 70 55.7
Manes.07G005200 Manihot esculenta HOM05D012217 ORTHO05D009412 1.3e-07 59.3 71 56.3
Sopen10g029740 Solanum pennellii HOM05D008319 ORTHO05D009412 2.3e-07 58.5 68 51.5
Potri.006G056000 Populus trichocarpa HOM05D008758 ORTHO05D009412 3.8e-07 57.8 70 58.6
QL07p021867 Quercus lobata HOM05D008758 ORTHO05D009412 5.0e-07 57.4 69 55.1
Oeu064313.1 Olea europaea HOM05D008319 ORTHO05D009412 6.6e-07 57.0 69 53.6
CAN.G1392.9 Capsicum annuum HOM05D008319 ORTHO05D009412 1.5e-06 55.8 63 50.8
Gohir.D01G122000 Gossypium hirsutum HOM05D014458 ORTHO05D016968 1.5e-06 55.8 68 54.4
Peaxi162Scf00189g00522 Petunia axillaris HOM05D008319 ORTHO05D018042 1.9e-06 55.5 68 50.0
Nitab4.5_0002861g0010 Nicotiana tabacum HOM05D008319 ORTHO05D009412 2.5e-06 55.1 64 51.6
Solyc01g087020.2 Solanum lycopersicum HOM05D008319 ORTHO05D009412 2.5e-06 55.1 59 61.0
TAR623G0972 Trochodendron aralioides HOM05D020325 ORTHO05D010948 2.5e-06 55.1 68 48.5
Atru.chr1.976 Acer truncatum HOM05D008758 ORTHO05D009412 3.3e-06 54.7 61 59.0
Cpa.g.sc85.131 Carica papaya HOM05D008319 ORTHO05D009412 3.3e-06 54.7 67 49.3
Nitab4.5_0000452g0110 Nicotiana tabacum HOM05D008319 ORTHO05D009412 3.3e-06 54.7 63 57.1
Sopen01g034100 Solanum pennellii HOM05D001213 ORTHO05D001042 3.3e-06 54.7 59 61.0
TAR633G0278 Trochodendron aralioides HOM05D020325 ORTHO05D010948 3.3e-06 54.7 69 56.5
DCAR_013575 Daucus carota HOM05D008319 ORTHO05D009412 4.2e-06 54.3 56 53.6
PGSC0003DMG400006890 Solanum tuberosum HOM05D008319 ORTHO05D009412 4.2e-06 54.3 59 61.0
Thecc.05G163500 Theobroma cacao HOM05D010551 ORTHO05D012668 4.2e-06 54.3 66 53.0
Atru.chr1.1008 Acer truncatum HOM05D008758 ORTHO05D009412 7.2e-06 53.5 61 57.4
Aqoxy2G03622 Aquilegia oxysepala HOM05D008758 ORTHO05D009412 7.2e-06 53.5 61 59.0
EL10Ac3g07002 Beta vulgaris HOM05D024890 ORTHO05D026518 7.2e-06 53.5 68 48.5
COL.COLO4_28691 Corchorus olitorius HOM05D010551 ORTHO05D012668 7.2e-06 53.5 72 56.9
Gohir.A01G134700 Gossypium hirsutum HOM05D010551 ORTHO05D012668 7.2e-06 53.5 66 48.5
Gorai.006G138800 Gossypium raimondii HOM05D010551 ORTHO05D012668 7.2e-06 53.5 68 48.5
Sc11g0009250 Simmondsia chinensis HOM05D008758 ORTHO05D009412 7.2e-06 53.5 70 48.6


User provided reference genes

Program Settings